RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 CERS5Q8N5B7 392 aa27.34■■□□□ 1.97
CBWD1-223ENST00000613988 PAPPA2Q9BXP8 1791 aa27.34■■□□□ 1.97
CBWD1-223ENST00000613988 DLGAP5Q15398 846 aa27.33■■□□□ 1.97
CBWD1-223ENST00000613988 APOBEC3FQ8IUX4 373 aaKnown RBP27.33■■□□□ 1.97
CBWD1-223ENST00000613988 ZBED3Q96IU2 234 aaPredicted RBP27.33■■□□□ 1.97
CBWD1-223ENST00000613988 PUS3Q9BZE2 481 aaKnown RBP27.33■■□□□ 1.97
CBWD1-223ENST00000613988 BICC1Q9H694 974 aaKnown RBP27.33■■□□□ 1.97
CBWD1-223ENST00000613988 CASP8AP2Q9UKL3 1982 aa27.32■■□□□ 1.96
CBWD1-223ENST00000613988 UBE2Q2LH0YL09 131 aa27.32■■□□□ 1.96
CBWD1-223ENST00000613988 RASAL3Q86YV0 1011 aa27.32■■□□□ 1.96
CBWD1-223ENST00000613988 CDCA7LQ96GN5 454 aa27.32■■□□□ 1.96
CBWD1-223ENST00000613988 JAG2Q9Y219 1238 aa27.32■■□□□ 1.96
CBWD1-223ENST00000613988 F8W031 263 aaPredicted RBP27.31■■□□□ 1.96
CBWD1-223ENST00000613988 FKBP1AP62942 108 aaKnown RBP27.31■■□□□ 1.96
CBWD1-223ENST00000613988 UBE4AQ14139 1066 aa27.31■■□□□ 1.96
CBWD1-223ENST00000613988 CSRNP1Q96S65 589 aa27.31■■□□□ 1.96
CBWD1-223ENST00000613988 SAGE1Q9NXZ1 904 aa27.31■■□□□ 1.96
CBWD1-223ENST00000613988 RABL6Q3YEC7 729 aaPredicted RBP27.3■■□□□ 1.96
CBWD1-223ENST00000613988 ALDH1L2Q3SY69 923 aa27.29■■□□□ 1.96
CBWD1-223ENST00000613988 REM2Q8IYK8 340 aaPredicted RBP27.29■■□□□ 1.96
CBWD1-223ENST00000613988 MTMR14Q8NCE2 650 aa27.29■■□□□ 1.96
CBWD1-223ENST00000613988 RNF186Q9NXI6 227 aa27.29■■□□□ 1.96
CBWD1-223ENST00000613988 RIPOR2Q9Y4F9 1068 aa27.29■■□□□ 1.96
CBWD1-223ENST00000613988 MROH5Q6ZUA9 1318 aa27.29■■□□□ 1.96
CBWD1-223ENST00000613988 TRPA1O75762 1119 aa27.28■■□□□ 1.96
CBWD1-223ENST00000613988 HIBADHP31937 336 aaKnown RBP27.28■■□□□ 1.96
CBWD1-223ENST00000613988 ANKRD44Q8N8A2 993 aa27.28■■□□□ 1.96
CBWD1-223ENST00000613988 AKAP11Q9UKA4 1901 aa27.28■■□□□ 1.96
CBWD1-223ENST00000613988 GYG1P46976 350 aa27.27■■□□□ 1.96
CBWD1-223ENST00000613988 CFAP100Q494V2 611 aa27.27■■□□□ 1.96
CBWD1-223ENST00000613988 TRMT2AQ8IZ69 625 aaKnown RBP27.27■■□□□ 1.96
CBWD1-223ENST00000613988 USP44Q9H0E7 712 aa27.27■■□□□ 1.96
CBWD1-223ENST00000613988 MYO1BO43795 1136 aa27.26■■□□□ 1.95
CBWD1-223ENST00000613988 TDRD7Q8NHU6 1098 aaKnown RBP27.26■■□□□ 1.95
CBWD1-223ENST00000613988 FAM84BQ96KN1 310 aaPredicted RBP27.26■■□□□ 1.95
CBWD1-223ENST00000613988 DEFB129Q9H1M3 183 aa27.26■■□□□ 1.95
CBWD1-223ENST00000613988 SMC4Q9NTJ3 1288 aa27.26■■□□□ 1.95
CBWD1-223ENST00000613988 PCDHAC2Q9Y5I4 1007 aa27.26■■□□□ 1.95
CBWD1-223ENST00000613988 FAM205AQ6ZU69 1335 aa27.26■■□□□ 1.95
CBWD1-223ENST00000613988 PRKG1Q13976 671 aa27.25■■□□□ 1.95
CBWD1-223ENST00000613988 ARMC9Q7Z3E5 817 aa27.25■■□□□ 1.95
CBWD1-223ENST00000613988 RBM5P52756 815 aaKnown RBP eCLIP27.24■■□□□ 1.95
CBWD1-223ENST00000613988 LRRC24Q50LG9 513 aa27.24■■□□□ 1.95
CBWD1-223ENST00000613988 METTL24Q5JXM2 366 aa27.24■■□□□ 1.95
CBWD1-223ENST00000613988 PRMT6Q96LA8 375 aaPredicted RBP27.24■■□□□ 1.95
CBWD1-223ENST00000613988 SPDYE2BA6NHP3 402 aa27.23■■□□□ 1.95
CBWD1-223ENST00000613988 SPDYE6P0CI01 402 aa27.23■■□□□ 1.95
CBWD1-223ENST00000613988 MFSD14BQ5SR56 506 aa27.23■■□□□ 1.95
CBWD1-223ENST00000613988 MCOLN1Q9GZU1 580 aa27.23■■□□□ 1.95
CBWD1-223ENST00000613988 CLRN2A0PK11 232 aa27.22■■□□□ 1.95
CBWD1-223ENST00000613988 CCDC85CA6NKD9 419 aa27.22■■□□□ 1.95
CBWD1-223ENST00000613988 DGKZQ13574 1117 aa27.22■■□□□ 1.95
CBWD1-223ENST00000613988 VPS37DQ86XT2 251 aa27.22■■□□□ 1.95
CBWD1-223ENST00000613988 COL1A1P02452 1464 aaPredicted RBP27.22■■□□□ 1.95
CBWD1-223ENST00000613988 KLHDC4Q8TBB5 520 aa27.22■■□□□ 1.95
CBWD1-223ENST00000613988 VEZTQ9HBM0 779 aa27.22■■□□□ 1.95
CBWD1-223ENST00000613988 ANGEL1Q9UNK9 670 aaKnown RBP27.22■■□□□ 1.95
CBWD1-223ENST00000613988 PDE8BO95263 885 aa27.21■■□□□ 1.95
CBWD1-223ENST00000613988 PTPN12Q05209 780 aaKnown RBP27.21■■□□□ 1.95
CBWD1-223ENST00000613988 TTF2Q9UNY4 1162 aaKnown RBP27.21■■□□□ 1.95
CBWD1-223ENST00000613988 PPP2R3BQ9Y5P8 575 aa27.21■■□□□ 1.95
CBWD1-223ENST00000613988 ECM29Q5VYK3 1845 aa27.2■■□□□ 1.95
CBWD1-223ENST00000613988 CT47B1P0C2W7 299 aaPredicted RBP27.2■■□□□ 1.94
CBWD1-223ENST00000613988 CAVIN4Q5BKX8 364 aa27.2■■□□□ 1.94
CBWD1-223ENST00000613988 FBXO33Q7Z6M2 555 aa27.2■■□□□ 1.94
CBWD1-223ENST00000613988 MKRN3Q13064 507 aaKnown RBP27.19■■□□□ 1.94
CBWD1-223ENST00000613988 FRAT2O75474 233 aaPredicted RBP27.18■■□□□ 1.94
CBWD1-223ENST00000613988 LDLRAD1Q5T700 205 aa27.18■■□□□ 1.94
CBWD1-223ENST00000613988 VGLL2Q8N8G2 317 aa27.18■■□□□ 1.94
CBWD1-223ENST00000613988 SERPINA10Q9UK55 444 aa27.18■■□□□ 1.94
CBWD1-223ENST00000613988 NOB1Q9ULX3 412 aaKnown RBP27.18■■□□□ 1.94
CBWD1-223ENST00000613988 FZD1Q9UP38 647 aa27.18■■□□□ 1.94
CBWD1-223ENST00000613988 IQSEC3Q9UPP2 1182 aaPredicted RBP27.18■■□□□ 1.94
CBWD1-223ENST00000613988 GTF3C3Q9Y5Q9 886 aa27.18■■□□□ 1.94
CBWD1-223ENST00000613988 AOX1Q06278 1338 aa27.17■■□□□ 1.94
CBWD1-223ENST00000613988 PPP1R12BO60237 982 aaPredicted RBP27.17■■□□□ 1.94
CBWD1-223ENST00000613988 SUPT20HL1Q3ZLR7 823 aa27.17■■□□□ 1.94
CBWD1-223ENST00000613988 SUPT16HQ9Y5B9 1047 aaKnown RBP27.17■■□□□ 1.94
CBWD1-223ENST00000613988 TM4SF4P48230 202 aa27.16■■□□□ 1.94
CBWD1-223ENST00000613988 CHAF1AQ13111 956 aaPredicted RBP27.16■■□□□ 1.94
CBWD1-223ENST00000613988 NEFLP07196 543 aa27.14■■□□□ 1.94
CBWD1-223ENST00000613988 RASA3Q14644 834 aa27.14■■□□□ 1.94
CBWD1-223ENST00000613988 NBPF12Q5TAG4 269 aaPredicted RBP27.14■■□□□ 1.94
CBWD1-223ENST00000613988 SLC10A4Q96EP9 437 aa27.14■■□□□ 1.94
CBWD1-223ENST00000613988 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.14■■□□□ 1.94
CBWD1-223ENST00000613988 RCAN3Q9UKA8 241 aa27.14■■□□□ 1.94
CBWD1-223ENST00000613988 EYA2O00167 538 aa27.13■■□□□ 1.93
CBWD1-223ENST00000613988 IFIT1P09914 478 aaKnown RBP27.13■■□□□ 1.93
CBWD1-223ENST00000613988 UBTFL1P0CB47 393 aaPredicted RBP27.13■■□□□ 1.93
CBWD1-223ENST00000613988 RFX5P48382 616 aaPredicted RBP27.13■■□□□ 1.93
CBWD1-223ENST00000613988 BCAMP50895 628 aa27.13■■□□□ 1.93
CBWD1-223ENST00000613988 SREBF2Q12772 1141 aa27.13■■□□□ 1.93
CBWD1-223ENST00000613988 PUM3Q15397 648 aaKnown RBP27.13■■□□□ 1.93
CBWD1-223ENST00000613988 MAP3K11Q16584 847 aa27.13■■□□□ 1.93
CBWD1-223ENST00000613988 DZIP1LQ8IYY4 767 aaKnown RBP27.13■■□□□ 1.93
CBWD1-223ENST00000613988 TBC1D22AQ8WUA7 517 aa27.13■■□□□ 1.93
CBWD1-223ENST00000613988 API5Q9BZZ5 524 aaKnown RBP27.13■■□□□ 1.93
CBWD1-223ENST00000613988 TDRD3Q9H7E2 651 aaKnown RBP27.13■■□□□ 1.93
CBWD1-223ENST00000613988 ZNF70Q9UC06 446 aaPredicted RBP27.13■■□□□ 1.93
CBWD1-223ENST00000613988 TBC1D8O95759 1140 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms