RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 PDIA4P13667 645 aaKnown RBP23.27■■□□□ 1.32
SMARCD2-212ENST00000613943 ANTXR2P58335 489 aa23.27■■□□□ 1.32
SMARCD2-212ENST00000613943 HS1BP3Q53T59 392 aa23.27■■□□□ 1.32
SMARCD2-212ENST00000613943 LLPHQ9BRT6 129 aaKnown RBP23.27■■□□□ 1.32
SMARCD2-212ENST00000613943 NBPF3Q9H094 633 aa23.27■■□□□ 1.32
SMARCD2-212ENST00000613943 SPATA31A1Q5TZJ5 1347 aa23.27■■□□□ 1.32
SMARCD2-212ENST00000613943 NUP98P52948 1817 aa23.26■■□□□ 1.31
SMARCD2-212ENST00000613943 APPP05067 770 aa23.26■■□□□ 1.31
SMARCD2-212ENST00000613943 KCNQ4P56696 695 aa23.26■■□□□ 1.31
SMARCD2-212ENST00000613943 GJB4Q9NTQ9 266 aa23.26■■□□□ 1.31
SMARCD2-212ENST00000613943 CTNNA3Q9UI47 895 aa23.26■■□□□ 1.31
SMARCD2-212ENST00000613943 ZKSCAN5Q9Y2L8 839 aa23.26■■□□□ 1.31
SMARCD2-212ENST00000613943 ZNF532Q9HCE3 1301 aa23.26■■□□□ 1.31
SMARCD2-212ENST00000613943 FDPSP14324 419 aaKnown RBP23.26■■□□□ 1.31
SMARCD2-212ENST00000613943 CCDC87Q9NVE4 849 aa23.26■■□□□ 1.31
SMARCD2-212ENST00000613943 SALL1Q9NSC2 1324 aa23.26■■□□□ 1.31
SMARCD2-212ENST00000613943 LOC102724428A0A0B4J2F2 783 aa23.25■■□□□ 1.31
SMARCD2-212ENST00000613943 ZNF213O14771 459 aa23.25■■□□□ 1.31
SMARCD2-212ENST00000613943 KCNQ2O43526 872 aa23.25■■□□□ 1.31
SMARCD2-212ENST00000613943 ADD1P35611 737 aaKnown RBP23.25■■□□□ 1.31
SMARCD2-212ENST00000613943 SIK1P57059 783 aa23.25■■□□□ 1.31
SMARCD2-212ENST00000613943 MB21D2Q8IYB1 491 aaPredicted RBP23.25■■□□□ 1.31
SMARCD2-212ENST00000613943 SMIM5Q71RC9 77 aa23.25■■□□□ 1.31
SMARCD2-212ENST00000613943 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.25■■□□□ 1.319e-8■■□□□ 14.4
SMARCD2-212ENST00000613943 INCENPQ9NQS7 918 aa23.25■■□□□ 1.31
SMARCD2-212ENST00000613943 CCDC39Q9UFE4 941 aa23.25■■□□□ 1.31
SMARCD2-212ENST00000613943 KLF18A0A0U1RQI7 1052 aa23.24■■□□□ 1.31
SMARCD2-212ENST00000613943 MAP3K11Q16584 847 aa23.24■■□□□ 1.31
SMARCD2-212ENST00000613943 TICAM2Q86XR7 235 aa23.24■■□□□ 1.31
SMARCD2-212ENST00000613943 TBC1D10CQ8IV04 446 aa23.24■■□□□ 1.31
SMARCD2-212ENST00000613943 ZNF274Q96GC6 653 aaPredicted RBP23.24■■□□□ 1.31
SMARCD2-212ENST00000613943 TNMDQ9H2S6 317 aa23.24■■□□□ 1.31
SMARCD2-212ENST00000613943 GOLGA8BA8MQT2 603 aa23.24■■□□□ 1.31
SMARCD2-212ENST00000613943 PUM3Q15397 648 aaKnown RBP23.24■■□□□ 1.31
SMARCD2-212ENST00000613943 AKAP11Q9UKA4 1901 aa23.24■■□□□ 1.31
SMARCD2-212ENST00000613943 CARMIL3Q8ND23 1372 aa23.23■■□□□ 1.31
SMARCD2-212ENST00000613943 PDE6AP16499 860 aa23.23■■□□□ 1.31
SMARCD2-212ENST00000613943 HMGN5P82970 282 aaKnown RBP23.23■■□□□ 1.31
SMARCD2-212ENST00000613943 RALYLQ86SE5 291 aaKnown RBP23.23■■□□□ 1.31
SMARCD2-212ENST00000613943 ILDR1Q86SU0 546 aaPredicted RBP23.23■■□□□ 1.31
SMARCD2-212ENST00000613943 USP28Q96RU2 1077 aa23.23■■□□□ 1.31
SMARCD2-212ENST00000613943 ZSCAN16Q9H4T2 348 aaPredicted RBP23.23■■□□□ 1.31
SMARCD2-212ENST00000613943 ANKRD36CQ5JPF3 1778 aa23.23■■□□□ 1.31
SMARCD2-212ENST00000613943 CCDC192P0DO97 292 aa23.22■■□□□ 1.31
SMARCD2-212ENST00000613943 RXRAP19793 462 aa23.22■■□□□ 1.31
SMARCD2-212ENST00000613943 UVSSAQ2YD98 709 aa23.22■■□□□ 1.31
SMARCD2-212ENST00000613943 HPS5Q9UPZ3 1129 aa23.22■■□□□ 1.31
SMARCD2-212ENST00000613943 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.22■■□□□ 1.31
SMARCD2-212ENST00000613943 MYO5AQ9Y4I1 1855 aaKnown RBP23.22■■□□□ 1.31
SMARCD2-212ENST00000613943 KDM4AO75164 1064 aa23.22■■□□□ 1.31
SMARCD2-212ENST00000613943 MCM5P33992 734 aa23.22■■□□□ 1.31
SMARCD2-212ENST00000613943 RASGRF1Q13972 1273 aa23.22■■□□□ 1.31
SMARCD2-212ENST00000613943 NCOA7Q8NI08 942 aa23.22■■□□□ 1.31
SMARCD2-212ENST00000613943 MPHOSPH8Q99549 860 aa23.22■■□□□ 1.31
SMARCD2-212ENST00000613943 NIP7Q9Y221 180 aaKnown RBP eCLIP23.22■■□□□ 1.31
SMARCD2-212ENST00000613943 MRVI1Q9Y6F6 885 aa23.22■■□□□ 1.31
SMARCD2-212ENST00000613943 CAMTA2O94983 1202 aa23.21■■□□□ 1.31
SMARCD2-212ENST00000613943 MYH3P11055 1940 aa23.21■■□□□ 1.31
SMARCD2-212ENST00000613943 FGFR2P21802 821 aa23.21■■□□□ 1.31
SMARCD2-212ENST00000613943 TYRO3Q06418 890 aa23.21■■□□□ 1.31
SMARCD2-212ENST00000613943 NAA16Q6N069 864 aaPredicted RBP23.21■■□□□ 1.31
SMARCD2-212ENST00000613943 LPIN2Q92539 896 aa23.21■■□□□ 1.31
SMARCD2-212ENST00000613943 UTP14AQ9BVJ6 771 aaKnown RBP23.21■■□□□ 1.31
SMARCD2-212ENST00000613943 PLCH1Q4KWH8 1693 aa23.21■■□□□ 1.31
SMARCD2-212ENST00000613943 LUZP1Q86V48 1076 aa23.21■■□□□ 1.31
SMARCD2-212ENST00000613943 SENP2Q9HC62 589 aa23.21■■□□□ 1.31
SMARCD2-212ENST00000613943 ARID4AP29374 1257 aaPredicted RBP23.2■■□□□ 1.3
SMARCD2-212ENST00000613943 CYB5R4Q7L1T6 521 aa23.2■■□□□ 1.3
SMARCD2-212ENST00000613943 ABCC12Q96J65 1359 aa23.2■■□□□ 1.3
SMARCD2-212ENST00000613943 WTIPA6NIX2 430 aaPredicted RBP23.2■■□□□ 1.3
SMARCD2-212ENST00000613943 SPATA5Q8NB90 893 aa23.2■■□□□ 1.3
SMARCD2-212ENST00000613943 IQSEC3Q9UPP2 1182 aaPredicted RBP23.2■■□□□ 1.3
SMARCD2-212ENST00000613943 TCRBV5S4A2TA0A5A2 114 aa23.19■■□□□ 1.3
SMARCD2-212ENST00000613943 BCAMP50895 628 aa23.19■■□□□ 1.3
SMARCD2-212ENST00000613943 PIP4K2BP78356 416 aa23.19■■□□□ 1.3
SMARCD2-212ENST00000613943 TTF1Q15361 905 aaPredicted RBP23.19■■□□□ 1.3
SMARCD2-212ENST00000613943 MAGEB6Q8N7X4 407 aa23.19■■□□□ 1.3
SMARCD2-212ENST00000613943 TTC12Q9H892 705 aaPredicted RBP23.19■■□□□ 1.3
SMARCD2-212ENST00000613943 CFAP45Q9UL16 551 aa23.19■■□□□ 1.3
SMARCD2-212ENST00000613943 MROH5Q6ZUA9 1318 aa23.19■■□□□ 1.3
SMARCD2-212ENST00000613943 STK11IPQ8N1F8 1099 aa23.19■■□□□ 1.3
SMARCD2-212ENST00000613943 ZNF512BQ96KM6 892 aaPredicted RBP23.19■■□□□ 1.3
SMARCD2-212ENST00000613943 GOLPH3LQ9H4A5 285 aa23.19■■□□□ 1.3
SMARCD2-212ENST00000613943 A0A087WWV3 80 aa23.18■■□□□ 1.3
SMARCD2-212ENST00000613943 POLR3DP05423 398 aaPredicted RBP23.18■■□□□ 1.3
SMARCD2-212ENST00000613943 ANO6Q4KMQ2 910 aa23.18■■□□□ 1.3
SMARCD2-212ENST00000613943 ZSCAN25Q6NSZ9 544 aa23.18■■□□□ 1.3
SMARCD2-212ENST00000613943 CCDC144CPQ8IYA2 1237 aa23.18■■□□□ 1.3
SMARCD2-212ENST00000613943 CLSTN2Q9H4D0 955 aa23.18■■□□□ 1.3
SMARCD2-212ENST00000613943 B4E1Z4 1266 aa23.17■■□□□ 1.3
SMARCD2-212ENST00000613943 EVCP57679 992 aa23.17■■□□□ 1.3
SMARCD2-212ENST00000613943 AIDAQ96BJ3 306 aa23.17■■□□□ 1.3
SMARCD2-212ENST00000613943 AHDC1Q5TGY3 1603 aaPredicted RBP23.17■■□□□ 1.3
SMARCD2-212ENST00000613943 UBE3CQ15386 1083 aa23.17■■□□□ 1.3
SMARCD2-212ENST00000613943 ARMT1Q9H993 441 aa23.17■■□□□ 1.3
SMARCD2-212ENST00000613943 NEDD4P46934 1319 aa23.17■■□□□ 1.3
SMARCD2-212ENST00000613943 ZNF500O60304 480 aaPredicted RBP23.16■■□□□ 1.3
SMARCD2-212ENST00000613943 SLC5A1P13866 664 aa23.16■■□□□ 1.3
SMARCD2-212ENST00000613943 AIFM3Q96NN9 605 aa23.16■■□□□ 1.3
SMARCD2-212ENST00000613943 DDX19AQ9NUU7 478 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms