RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 ERVV-1B6SEH8 477 aa10.04□□□□□ -0.8
PDE6A-204ENST00000613228 COL3A1P02461 1466 aaPredicted RBP10.04□□□□□ -0.8
PDE6A-204ENST00000613228 CRB1P82279 1406 aa10.04□□□□□ -0.8
PDE6A-204ENST00000613228 TTLL5Q6EMB2 1281 aa10.04□□□□□ -0.8
PDE6A-204ENST00000613228 CCAR1Q8IX12 1150 aaKnown RBP10.04□□□□□ -0.8
PDE6A-204ENST00000613228 RAB34Q9BZG1 259 aa10.04□□□□□ -0.8
PDE6A-204ENST00000613228 KIF2AO00139 706 aaPredicted RBP10.04□□□□□ -0.8
PDE6A-204ENST00000613228 F13A1P00488 732 aa10.04□□□□□ -0.8
PDE6A-204ENST00000613228 HSPA4P34932 840 aa10.04□□□□□ -0.8
PDE6A-204ENST00000613228 KCNG4Q8TDN1 519 aa10.04□□□□□ -0.8
PDE6A-204ENST00000613228 APPBP2Q92624 585 aa10.04□□□□□ -0.8
PDE6A-204ENST00000613228 BMP2KQ9NSY1 1161 aaPredicted RBP10.04□□□□□ -0.8
PDE6A-204ENST00000613228 IL6STP40189 918 aaPredicted RBP10.04□□□□□ -0.8
PDE6A-204ENST00000613228 POLA2Q14181 598 aa10.04□□□□□ -0.8
PDE6A-204ENST00000613228 PPP2R5BQ15173 497 aa10.04□□□□□ -0.8
PDE6A-204ENST00000613228 TMCO3Q6UWJ1 677 aa10.04□□□□□ -0.8
PDE6A-204ENST00000613228 Q6ZUG5 572 aa10.04□□□□□ -0.8
PDE6A-204ENST00000613228 KNDC1Q76NI1 1749 aa10.03□□□□□ -0.8
PDE6A-204ENST00000613228 CTSWP56202 376 aa10.03□□□□□ -0.8
PDE6A-204ENST00000613228 CEBPZQ03701 1054 aaKnown RBP10.03□□□□□ -0.8
PDE6A-204ENST00000613228 TMEM87BQ96K49 555 aa10.03□□□□□ -0.8
PDE6A-204ENST00000613228 CEP89Q96ST8 783 aa10.03□□□□□ -0.8
PDE6A-204ENST00000613228 ZBTB43O43298 467 aa10.03□□□□□ -0.8
PDE6A-204ENST00000613228 RANBP6O60518 1105 aaKnown RBP10.03□□□□□ -0.8
PDE6A-204ENST00000613228 CCDC148Q8NFR7 591 aa10.03□□□□□ -0.8
PDE6A-204ENST00000613228 XAGE2Q96GT9 111 aa10.03□□□□□ -0.8
PDE6A-204ENST00000613228 CCNL1Q9UK58 526 aaPredicted RBP10.03□□□□□ -0.8
PDE6A-204ENST00000613228 NEMFO60524 1076 aa10.03□□□□□ -0.8
PDE6A-204ENST00000613228 BRAPQ7Z569 592 aa10.03□□□□□ -0.8
PDE6A-204ENST00000613228 LRRC27Q9C0I9 530 aa10.03□□□□□ -0.8
PDE6A-204ENST00000613228 EFCC1Q9HA90 598 aa10.03□□□□□ -0.8
PDE6A-204ENST00000613228 ORC3Q9UBD5 711 aaPredicted RBP10.03□□□□□ -0.8
PDE6A-204ENST00000613228 MYOM1P52179 1685 aa10.03□□□□□ -0.8
PDE6A-204ENST00000613228 SLC27A2O14975 620 aa10.03□□□□□ -0.8
PDE6A-204ENST00000613228 AK2P54819 239 aa10.03□□□□□ -0.8
PDE6A-204ENST00000613228 DNAJC10Q8IXB1 793 aa10.03□□□□□ -0.8
PDE6A-204ENST00000613228 CRACR2BQ8N4Y2 399 aaPredicted RBP10.03□□□□□ -0.8
PDE6A-204ENST00000613228 JARID2Q92833 1246 aaPredicted RBP10.03□□□□□ -0.8
PDE6A-204ENST00000613228 SNRKQ9NRH2 765 aa10.03□□□□□ -0.8
PDE6A-204ENST00000613228 STX1AQ16623 288 aa10.02□□□□□ -0.8
PDE6A-204ENST00000613228 TMED8Q6PL24 325 aaPredicted RBP10.02□□□□□ -0.8
PDE6A-204ENST00000613228 DDX17Q92841 729 aaKnown RBP10.02□□□□□ -0.8
PDE6A-204ENST00000613228 RFX7Q2KHR2 1363 aa10.02□□□□□ -0.8
PDE6A-204ENST00000613228 MAST3O60307 1309 aa10.02□□□□□ -0.8
PDE6A-204ENST00000613228 KLF18A0A0U1RQI7 1052 aa10.02□□□□□ -0.81
PDE6A-204ENST00000613228 PRC1O43663 620 aa10.02□□□□□ -0.81
PDE6A-204ENST00000613228 FLAD1Q8NFF5 587 aa10.02□□□□□ -0.81
PDE6A-204ENST00000613228 BRF1Q92994 677 aa10.02□□□□□ -0.81
PDE6A-204ENST00000613228 KCNQ3O43525 872 aa10.02□□□□□ -0.81
PDE6A-204ENST00000613228 EPS15P42566 896 aa10.02□□□□□ -0.81
PDE6A-204ENST00000613228 PRIM1P49642 420 aaKnown RBP10.02□□□□□ -0.81
PDE6A-204ENST00000613228 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.02□□□□□ -0.81
PDE6A-204ENST00000613228 SNX14Q9Y5W7 946 aa10.02□□□□□ -0.81
PDE6A-204ENST00000613228 PARP3Q9Y6F1 533 aa10.02□□□□□ -0.81
PDE6A-204ENST00000613228 KIF1AQ12756 1690 aa10.02□□□□□ -0.81
PDE6A-204ENST00000613228 A1BGP04217 495 aa10.02□□□□□ -0.81
PDE6A-204ENST00000613228 TMEM266Q2M3C6 531 aa10.02□□□□□ -0.81
PDE6A-204ENST00000613228 STK11IPQ8N1F8 1099 aa10.02□□□□□ -0.81
PDE6A-204ENST00000613228 CD163L1Q9NR16 1453 aa10.01□□□□□ -0.81
PDE6A-204ENST00000613228 SYCE3A1L190 88 aa10.01□□□□□ -0.81
PDE6A-204ENST00000613228 C6orf229H3BNL8 230 aa10.01□□□□□ -0.81
PDE6A-204ENST00000613228 ERLIN1O75477 346 aa10.01□□□□□ -0.81
PDE6A-204ENST00000613228 RTN1Q16799 776 aa10.01□□□□□ -0.81
PDE6A-204ENST00000613228 LRSAM1Q6UWE0 723 aa10.01□□□□□ -0.81
PDE6A-204ENST00000613228 HAUS7Q99871 368 aa10.01□□□□□ -0.81
PDE6A-204ENST00000613228 SERPINC1P01008 464 aa10.01□□□□□ -0.81
PDE6A-204ENST00000613228 ZSCAN29Q8IWY8 852 aaPredicted RBP10.01□□□□□ -0.81
PDE6A-204ENST00000613228 USP21Q9UK80 565 aa10.01□□□□□ -0.81
PDE6A-204ENST00000613228 GNPATO15228 680 aa10.01□□□□□ -0.81
PDE6A-204ENST00000613228 NF2P35240 595 aa10.01□□□□□ -0.81
PDE6A-204ENST00000613228 MTX1Q13505 466 aa10.01□□□□□ -0.81
PDE6A-204ENST00000613228 FILIP1Q7Z7B0 1213 aa10.01□□□□□ -0.81
PDE6A-204ENST00000613228 TSPY2A6NKD2 308 aa10.01□□□□□ -0.81
PDE6A-204ENST00000613228 GSPT1P15170 499 aaKnown RBP10.01□□□□□ -0.81
PDE6A-204ENST00000613228 NT5C2P49902 561 aa10.01□□□□□ -0.81
PDE6A-204ENST00000613228 NLRP5P59047 1200 aa10.01□□□□□ -0.81
PDE6A-204ENST00000613228 CNBD1Q8NA66 436 aa10.01□□□□□ -0.81
PDE6A-204ENST00000613228 LUC7LQ9NQ29 371 aaKnown RBP10.01□□□□□ -0.81
PDE6A-204ENST00000613228 PAXBP1Q9Y5B6 917 aa10.01□□□□□ -0.81
PDE6A-204ENST00000613228 SEC24BO95487 1268 aa10□□□□□ -0.81
PDE6A-204ENST00000613228 KRT18P05783 430 aaKnown RBP10□□□□□ -0.81
PDE6A-204ENST00000613228 TNIP1Q15025 636 aa10□□□□□ -0.81
PDE6A-204ENST00000613228 IFIT1BQ5T764 474 aaKnown RBP10□□□□□ -0.81
PDE6A-204ENST00000613228 PPFIBP1Q86W92 1011 aa10□□□□□ -0.81
PDE6A-204ENST00000613228 CNPY4Q8N129 248 aa10□□□□□ -0.81
PDE6A-204ENST00000613228 CUL5Q93034 780 aa10□□□□□ -0.81
PDE6A-204ENST00000613228 SEMA3EO15041 775 aa10□□□□□ -0.81
PDE6A-204ENST00000613228 FGFR1OPO95684 399 aaKnown RBP10□□□□□ -0.81
PDE6A-204ENST00000613228 ATP2B1P20020 1258 aa10□□□□□ -0.81
PDE6A-204ENST00000613228 MYRIPQ8NFW9 859 aa10□□□□□ -0.81
PDE6A-204ENST00000613228 RUFY1Q96T51 708 aa10□□□□□ -0.81
PDE6A-204ENST00000613228 ZNHIT6Q9NWK9 470 aaKnown RBP10□□□□□ -0.81
PDE6A-204ENST00000613228 HDAC9Q9UKV0 1011 aa10□□□□□ -0.81
PDE6A-204ENST00000613228 UBR1Q8IWV7 1749 aa10□□□□□ -0.81
PDE6A-204ENST00000613228 CCDC194A0A1B0GVG4 234 aa10□□□□□ -0.81
PDE6A-204ENST00000613228 MNAT1P51948 309 aa10□□□□□ -0.81
PDE6A-204ENST00000613228 MAGEB6Q8N7X4 407 aa10□□□□□ -0.81
PDE6A-204ENST00000613228 OTUD7AQ8TE49 926 aaPredicted RBP10□□□□□ -0.81
PDE6A-204ENST00000613228 NAP1L4Q99733 375 aaKnown RBP10□□□□□ -0.81
PDE6A-204ENST00000613228 DBNDD2Q9BQY9 259 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms