RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 ANKRD1Q15327 319 aa19.4■□□□□ 0.7
CNOT3-208ENST00000613073 VPS37CA5D8V6 355 aaPredicted RBP19.39■□□□□ 0.7
CNOT3-208ENST00000613073 Q6ZUG5 572 aa19.39■□□□□ 0.7
CNOT3-208ENST00000613073 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.39■□□□□ 0.7
CNOT3-208ENST00000613073 KCNF1Q9H3M0 494 aa19.39■□□□□ 0.7
CNOT3-208ENST00000613073 SNAP23O00161 211 aa19.39■□□□□ 0.69
CNOT3-208ENST00000613073 CNPY2Q9Y2B0 182 aa19.39■□□□□ 0.69
CNOT3-208ENST00000613073 MYH3P11055 1940 aa19.39■□□□□ 0.69
CNOT3-208ENST00000613073 CAMTA2O94983 1202 aa19.38■□□□□ 0.69
CNOT3-208ENST00000613073 MCAMP43121 646 aa19.38■□□□□ 0.69
CNOT3-208ENST00000613073 NAA30Q147X3 362 aaPredicted RBP19.38■□□□□ 0.69
CNOT3-208ENST00000613073 TTLL5Q6EMB2 1281 aa19.38■□□□□ 0.69
CNOT3-208ENST00000613073 SMIM5Q71RC9 77 aa19.38■□□□□ 0.69
CNOT3-208ENST00000613073 SEC31BQ9NQW1 1179 aa19.38■□□□□ 0.69
CNOT3-208ENST00000613073 NIP7Q9Y221 180 aaKnown RBP eCLIP19.38■□□□□ 0.69
CNOT3-208ENST00000613073 MYH14Q7Z406 1995 aaKnown RBP19.38■□□□□ 0.69
CNOT3-208ENST00000613073 PDE8BO95263 885 aa19.38■□□□□ 0.69
CNOT3-208ENST00000613073 F13A1P00488 732 aa19.38■□□□□ 0.69
CNOT3-208ENST00000613073 PLCD3Q8N3E9 789 aa19.38■□□□□ 0.69
CNOT3-208ENST00000613073 DSCC1Q9BVC3 393 aa19.38■□□□□ 0.69
CNOT3-208ENST00000613073 UTP14AQ9BVJ6 771 aaKnown RBP19.38■□□□□ 0.69
CNOT3-208ENST00000613073 HSP90B1P14625 803 aaKnown RBP19.38■□□□□ 0.69
CNOT3-208ENST00000613073 PTF1AQ7RTS3 328 aa19.38■□□□□ 0.69
CNOT3-208ENST00000613073 VGLL2Q8N8G2 317 aa19.38■□□□□ 0.69
CNOT3-208ENST00000613073 FAM184AQ8NB25 1140 aa19.38■□□□□ 0.69
CNOT3-208ENST00000613073 AP5Z1O43299 807 aa19.37■□□□□ 0.69
CNOT3-208ENST00000613073 KIAA1524Q8TCG1 905 aa19.37■□□□□ 0.69
CNOT3-208ENST00000613073 ANKRD7Q92527 254 aa19.37■□□□□ 0.69
CNOT3-208ENST00000613073 MTMR6Q9Y217 621 aa19.37■□□□□ 0.69
CNOT3-208ENST00000613073 GIMAP6Q6P9H5 292 aa19.37■□□□□ 0.69
CNOT3-208ENST00000613073 LARP1BQ659C4 914 aaKnown RBP19.36■□□□□ 0.69
CNOT3-208ENST00000613073 BRF1Q92994 677 aa19.36■□□□□ 0.69
CNOT3-208ENST00000613073 PUS7LQ9H0K6 701 aaKnown RBP19.36■□□□□ 0.69
CNOT3-208ENST00000613073 KDM4AO75164 1064 aa19.36■□□□□ 0.69
CNOT3-208ENST00000613073 CDK11BP21127 795 aaKnown RBP19.36■□□□□ 0.69
CNOT3-208ENST00000613073 PHKA1P46020 1223 aa19.36■□□□□ 0.69
CNOT3-208ENST00000613073 UVSSAQ2YD98 709 aa19.36■□□□□ 0.69
CNOT3-208ENST00000613073 CHST3Q7LGC8 479 aa19.36■□□□□ 0.69
CNOT3-208ENST00000613073 FAM182BQ5T319 152 aa19.35■□□□□ 0.69
CNOT3-208ENST00000613073 ALDH8A1Q9H2A2 487 aaPredicted RBP19.35■□□□□ 0.69
CNOT3-208ENST00000613073 FIBPO43427 364 aa19.35■□□□□ 0.69
CNOT3-208ENST00000613073 HAND2P61296 217 aa19.35■□□□□ 0.69
CNOT3-208ENST00000613073 FERMT3Q86UX7 667 aa19.35■□□□□ 0.69
CNOT3-208ENST00000613073 E7EWF7 191 aa19.34■□□□□ 0.69
CNOT3-208ENST00000613073 NCBP1Q09161 790 aaKnown RBP19.34■□□□□ 0.69
CNOT3-208ENST00000613073 CCDC183Q5T5S1 534 aa19.34■□□□□ 0.69
CNOT3-208ENST00000613073 CCDC102BQ68D86 513 aa19.34■□□□□ 0.69
CNOT3-208ENST00000613073 MPHOSPH8Q99549 860 aa19.34■□□□□ 0.69
CNOT3-208ENST00000613073 LRRFIP1Q32MZ4 808 aaKnown RBP19.34■□□□□ 0.69
CNOT3-208ENST00000613073 JAK2O60674 1132 aa19.33■□□□□ 0.69
CNOT3-208ENST00000613073 DNM1Q05193 864 aaKnown RBP19.33■□□□□ 0.69
CNOT3-208ENST00000613073 SMARCC1Q92922 1105 aaPredicted RBP19.33■□□□□ 0.69
CNOT3-208ENST00000613073 C16orf45Q96MC5 204 aaPredicted RBP19.33■□□□□ 0.69
CNOT3-208ENST00000613073 IDH1O75874 414 aaKnown RBP19.33■□□□□ 0.68
CNOT3-208ENST00000613073 CDC37L1Q7L3B6 337 aa19.33■□□□□ 0.68
CNOT3-208ENST00000613073 DHX32Q7L7V1 743 aaKnown RBP19.33■□□□□ 0.68
CNOT3-208ENST00000613073 LINC00116Q8NCU8 138 aa19.33■□□□□ 0.68
CNOT3-208ENST00000613073 FOXP2O15409 715 aa19.32■□□□□ 0.68
CNOT3-208ENST00000613073 ZFYP08048 801 aaPredicted RBP19.32■□□□□ 0.68
CNOT3-208ENST00000613073 AEBP2Q6ZN18 517 aaPredicted RBP19.32■□□□□ 0.68
CNOT3-208ENST00000613073 NWD2Q9ULI1 1742 aa19.32■□□□□ 0.68
CNOT3-208ENST00000613073 PUM3Q15397 648 aaKnown RBP19.32■□□□□ 0.68
CNOT3-208ENST00000613073 PARP10Q53GL7 1025 aa19.32■□□□□ 0.68
CNOT3-208ENST00000613073 SLC9C2Q5TAH2 1124 aa19.32■□□□□ 0.68
CNOT3-208ENST00000613073 BICDL1Q6ZP65 573 aa19.32■□□□□ 0.68
CNOT3-208ENST00000613073 APPBP2Q92624 585 aa19.32■□□□□ 0.68
CNOT3-208ENST00000613073 PIH1D3Q9NQM4 214 aaKnown RBP19.32■□□□□ 0.68
CNOT3-208ENST00000613073 OGFRQ9NZT2 677 aa19.32■□□□□ 0.68
CNOT3-208ENST00000613073 SPEF2Q9C093 1822 aa19.32■□□□□ 0.68
CNOT3-208ENST00000613073 NTSR2O95665 410 aa19.32■□□□□ 0.68
CNOT3-208ENST00000613073 APOBRQ0VD83 1088 aa19.32■□□□□ 0.68
CNOT3-208ENST00000613073 FAM173BQ6P4H8 233 aa19.32■□□□□ 0.68
CNOT3-208ENST00000613073 GTF3C6Q969F1 213 aa19.32■□□□□ 0.68
CNOT3-208ENST00000613073 PTGS1P23219 599 aa19.31■□□□□ 0.68
CNOT3-208ENST00000613073 DDX11Q96FC9 970 aa19.31■□□□□ 0.68
CNOT3-208ENST00000613073 ATP6V1DQ9Y5K8 247 aa19.31■□□□□ 0.68
CNOT3-208ENST00000613073 BCL9LQ86UU0 1499 aa19.31■□□□□ 0.68
CNOT3-208ENST00000613073 MROH5Q6ZUA9 1318 aa19.31■□□□□ 0.68
CNOT3-208ENST00000613073 GPAA1O43292 621 aa19.31■□□□□ 0.68
CNOT3-208ENST00000613073 PPFIA3O75145 1194 aa19.31■□□□□ 0.68
CNOT3-208ENST00000613073 FGAP02671 866 aa19.31■□□□□ 0.68
CNOT3-208ENST00000613073 TICAM2Q86XR7 235 aa19.31■□□□□ 0.68
CNOT3-208ENST00000613073 LPIN2Q92539 896 aa19.31■□□□□ 0.68
CNOT3-208ENST00000613073 ERICH4A6NGS2 130 aa19.3■□□□□ 0.68
CNOT3-208ENST00000613073 HMGB1P09429 215 aaKnown RBP19.3■□□□□ 0.68
CNOT3-208ENST00000613073 VPS72Q15906 364 aa19.3■□□□□ 0.68
CNOT3-208ENST00000613073 CCDC152Q4G0S7 254 aa19.3■□□□□ 0.68
CNOT3-208ENST00000613073 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.3■□□□□ 0.682e-7■■■□□ 16.4
CNOT3-208ENST00000613073 CTIFO43310 598 aaKnown RBP19.3■□□□□ 0.68
CNOT3-208ENST00000613073 SCRN1Q12765 414 aa19.3■□□□□ 0.68
CNOT3-208ENST00000613073 AK7Q96M32 723 aa19.3■□□□□ 0.68
CNOT3-208ENST00000613073 FEZ1Q99689 392 aa19.3■□□□□ 0.68
CNOT3-208ENST00000613073 AKAP11Q9UKA4 1901 aa19.3■□□□□ 0.68
CNOT3-208ENST00000613073 LAMA4Q16363 1823 aa19.29■□□□□ 0.68
CNOT3-208ENST00000613073 FGFR2P21802 821 aa19.29■□□□□ 0.68
CNOT3-208ENST00000613073 CCT2P78371 535 aaKnown RBP19.29■□□□□ 0.68
CNOT3-208ENST00000613073 EXOSC10Q01780 885 aaKnown RBP19.29■□□□□ 0.68
CNOT3-208ENST00000613073 LRMPQ12912 555 aa19.29■□□□□ 0.68
CNOT3-208ENST00000613073 CTNNA3Q9UI47 895 aa19.29■□□□□ 0.68
CNOT3-208ENST00000613073 ADD2P35612 726 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms