RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 SUPT20HL1Q3ZLR7 823 aa22.06■■□□□ 1.12
CSNK1E-215ENST00000612795 STK31Q9BXU1 1019 aa22.06■■□□□ 1.12
CSNK1E-215ENST00000612795 EFCC1Q9HA90 598 aa22.06■■□□□ 1.12
CSNK1E-215ENST00000612795 CLRN2A0PK11 232 aa22.05■■□□□ 1.12
CSNK1E-215ENST00000612795 F8W031 263 aaPredicted RBP22.05■■□□□ 1.12
CSNK1E-215ENST00000612795 APAF1O14727 1248 aa22.05■■□□□ 1.12
CSNK1E-215ENST00000612795 IREB2P48200 963 aaKnown RBP22.05■■□□□ 1.12
CSNK1E-215ENST00000612795 VEZTQ9HBM0 779 aa22.05■■□□□ 1.12
CSNK1E-215ENST00000612795 CD209Q9NNX6 404 aa22.05■■□□□ 1.12
CSNK1E-215ENST00000612795 BRCA2P51587 3418 aa22.05■■□□□ 1.12
CSNK1E-215ENST00000612795 UNCXA6NJT0 531 aa22.04■■□□□ 1.12
CSNK1E-215ENST00000612795 CHRNDQ07001 517 aa22.04■■□□□ 1.12
CSNK1E-215ENST00000612795 MTMR14Q8NCE2 650 aa22.04■■□□□ 1.12
CSNK1E-215ENST00000612795 ARMC5Q96C12 935 aa22.04■■□□□ 1.12
CSNK1E-215ENST00000612795 CACNA1FO60840 1977 aa22.04■■□□□ 1.12
CSNK1E-215ENST00000612795 SP3Q02447 781 aa22.03■■□□□ 1.12
CSNK1E-215ENST00000612795 CFAP100Q494V2 611 aa22.03■■□□□ 1.12
CSNK1E-215ENST00000612795 CERS5Q8N5B7 392 aa22.03■■□□□ 1.12
CSNK1E-215ENST00000612795 PCDHAC2Q9Y5I4 1007 aa22.03■■□□□ 1.12
CSNK1E-215ENST00000612795 ARAP2Q8WZ64 1704 aa22.03■■□□□ 1.12
CSNK1E-215ENST00000612795 H7C1W4 665 aa22.02■■□□□ 1.12
CSNK1E-215ENST00000612795 EN2P19622 333 aaPredicted RBP22.02■■□□□ 1.12
CSNK1E-215ENST00000612795 NBPF12Q5TAG4 269 aaPredicted RBP22.02■■□□□ 1.12
CSNK1E-215ENST00000612795 ANKRD13AQ8IZ07 590 aa22.02■■□□□ 1.12
CSNK1E-215ENST00000612795 TSPYL6Q8N831 410 aa22.02■■□□□ 1.12
CSNK1E-215ENST00000612795 TMEM106CQ9BVX2 250 aa22.02■■□□□ 1.12
CSNK1E-215ENST00000612795 SPDYE2BA6NHP3 402 aa22.01■■□□□ 1.11
CSNK1E-215ENST00000612795 SPDYE6P0CI01 402 aa22.01■■□□□ 1.11
CSNK1E-215ENST00000612795 DDX10Q13206 875 aaKnown RBP22.01■■□□□ 1.11
CSNK1E-215ENST00000612795 ZNF804AQ7Z570 1209 aa22.01■■□□□ 1.11
CSNK1E-215ENST00000612795 PLA2G12BQ9BX93 195 aa22.01■■□□□ 1.11
CSNK1E-215ENST00000612795 GJA5P36382 358 aa22■■□□□ 1.11
CSNK1E-215ENST00000612795 RBM5P52756 815 aaKnown RBP eCLIP22■■□□□ 1.11
CSNK1E-215ENST00000612795 ANKRD18BA2A2Z9 1011 aa21.99■■□□□ 1.11
CSNK1E-215ENST00000612795 FXR1P51114 621 aaKnown RBP eCLIP21.99■■□□□ 1.11
CSNK1E-215ENST00000612795 GCKRQ14397 625 aa21.99■■□□□ 1.11
CSNK1E-215ENST00000612795 PRMT6Q96LA8 375 aaPredicted RBP21.99■■□□□ 1.11
CSNK1E-215ENST00000612795 MYH16Q9H6N6 1097 aa21.99■■□□□ 1.11
CSNK1E-215ENST00000612795 SNAP23O00161 211 aa21.98■■□□□ 1.11
CSNK1E-215ENST00000612795 TAF5LO75529 589 aa21.98■■□□□ 1.11
CSNK1E-215ENST00000612795 USP2O75604 605 aaPredicted RBP21.98■■□□□ 1.11
CSNK1E-215ENST00000612795 RASA3Q14644 834 aa21.98■■□□□ 1.11
CSNK1E-215ENST00000612795 PTPN18Q99952 460 aa21.98■■□□□ 1.11
CSNK1E-215ENST00000612795 ELP3Q9H9T3 547 aa21.98■■□□□ 1.11
CSNK1E-215ENST00000612795 JAG2Q9Y219 1238 aa21.98■■□□□ 1.11
CSNK1E-215ENST00000612795 ZSWIM8A7E2V4 1837 aa21.97■■□□□ 1.11
CSNK1E-215ENST00000612795 TESPA1A2RU30 521 aaPredicted RBP21.97■■□□□ 1.11
CSNK1E-215ENST00000612795 CSF1RP07333 972 aa21.97■■□□□ 1.11
CSNK1E-215ENST00000612795 FKBP1AP62942 108 aaKnown RBP21.97■■□□□ 1.11
CSNK1E-215ENST00000612795 TNFAIP1Q13829 316 aa21.97■■□□□ 1.11
CSNK1E-215ENST00000612795 ARHGEF6Q15052 776 aa21.97■■□□□ 1.11
CSNK1E-215ENST00000612795 SLC9C1Q4G0N8 1177 aa21.97■■□□□ 1.11
CSNK1E-215ENST00000612795 C15orf52Q6ZUT6 534 aaKnown RBP21.97■■□□□ 1.11
CSNK1E-215ENST00000612795 G2E3Q7L622 706 aa21.97■■□□□ 1.11
CSNK1E-215ENST00000612795 HELBQ8NG08 1087 aaPredicted RBP21.97■■□□□ 1.11
CSNK1E-215ENST00000612795 TSR2Q969E8 191 aaKnown RBP21.97■■□□□ 1.11
CSNK1E-215ENST00000612795 OPTNQ96CV9 577 aa21.97■■□□□ 1.11
CSNK1E-215ENST00000612795 ZNF333Q96JL9 665 aa21.97■■□□□ 1.11
CSNK1E-215ENST00000612795 IRS2Q9Y4H2 1338 aa21.97■■□□□ 1.11
CSNK1E-215ENST00000612795 IL1R1P14778 569 aa21.96■■□□□ 1.11
CSNK1E-215ENST00000612795 NBPF11Q86T75 865 aa21.96■■□□□ 1.11
CSNK1E-215ENST00000612795 CHMP3Q9Y3E7 222 aa21.96■■□□□ 1.11
CSNK1E-215ENST00000612795 AOX1Q06278 1338 aa21.96■■□□□ 1.11
CSNK1E-215ENST00000612795 SLC4A2P04920 1241 aa21.95■■□□□ 1.1
CSNK1E-215ENST00000612795 CASP7P55210 303 aa21.95■■□□□ 1.1
CSNK1E-215ENST00000612795 CAP1Q01518 475 aa21.95■■□□□ 1.1
CSNK1E-215ENST00000612795 TAF1CQ15572 869 aaPredicted RBP21.95■■□□□ 1.1
CSNK1E-215ENST00000612795 SLC4A8Q2Y0W8 1093 aa21.95■■□□□ 1.1
CSNK1E-215ENST00000612795 PTCH2Q9Y6C5 1203 aa21.95■■□□□ 1.1
CSNK1E-215ENST00000612795 IFIT5Q13325 482 aaKnown RBP21.94■■□□□ 1.1
CSNK1E-215ENST00000612795 TWISTNBQ3B726 338 aaPredicted RBP21.94■■□□□ 1.1
CSNK1E-215ENST00000612795 ZFYVE28Q9HCC9 887 aa21.94■■□□□ 1.1
CSNK1E-215ENST00000612795 FLIIQ13045 1269 aa21.93■■□□□ 1.1
CSNK1E-215ENST00000612795 FKBP5Q13451 457 aaPredicted RBP21.93■■□□□ 1.1
CSNK1E-215ENST00000612795 DNAAF4Q8WXU2 420 aa21.93■■□□□ 1.1
CSNK1E-215ENST00000612795 COLQQ9Y215 455 aaPredicted RBP21.93■■□□□ 1.1
CSNK1E-215ENST00000612795 CCL15-CCL14A0A0B4J2E2 113 aa21.92■■□□□ 1.1
CSNK1E-215ENST00000612795 CCL15Q16663 113 aa21.92■■□□□ 1.1
CSNK1E-215ENST00000612795 SPDYE2Q495Y8 402 aa21.92■■□□□ 1.1
CSNK1E-215ENST00000612795 LINS1Q8NG48 757 aa21.92■■□□□ 1.1
CSNK1E-215ENST00000612795 MS4A4AQ96JQ5 239 aa21.92■■□□□ 1.1
CSNK1E-215ENST00000612795 CEP290O15078 2479 aa21.92■■□□□ 1.1
CSNK1E-215ENST00000612795 WDHD1O75717 1129 aaPredicted RBP21.91■■□□□ 1.1
CSNK1E-215ENST00000612795 MYCP01106 439 aaPredicted RBP21.91■■□□□ 1.1
CSNK1E-215ENST00000612795 GTF2A2P52657 109 aa21.91■■□□□ 1.1
CSNK1E-215ENST00000612795 BRI3BPQ8WY22 251 aa21.91■■□□□ 1.1
CSNK1E-215ENST00000612795 ZNF70Q9UC06 446 aaPredicted RBP21.91■■□□□ 1.1
CSNK1E-215ENST00000612795 PLIN1O60240 522 aa21.9■■□□□ 1.1
CSNK1E-215ENST00000612795 VGLL4Q14135 290 aa21.9■■□□□ 1.1
CSNK1E-215ENST00000612795 TAF7LQ5H9L4 462 aa21.9■■□□□ 1.1
CSNK1E-215ENST00000612795 MFSD14BQ5SR56 506 aa21.9■■□□□ 1.1
CSNK1E-215ENST00000612795 CNKSR2Q8WXI2 1034 aa21.9■■□□□ 1.1
CSNK1E-215ENST00000612795 TDRD3Q9H7E2 651 aaKnown RBP21.9■■□□□ 1.1
CSNK1E-215ENST00000612795 TTF2Q9UNY4 1162 aaKnown RBP21.9■■□□□ 1.1
CSNK1E-215ENST00000612795 CSADQ9Y600 493 aa21.9■■□□□ 1.1
CSNK1E-215ENST00000612795 TRIOBPQ9H2D6 2365 aa21.9■■□□□ 1.1
CSNK1E-215ENST00000612795 TNNI2P48788 182 aa21.89■■□□□ 1.09
CSNK1E-215ENST00000612795 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.89■■□□□ 1.09
CSNK1E-215ENST00000612795 OTUD5Q96G74 571 aa21.89■■□□□ 1.09
CSNK1E-215ENST00000612795 PRKRIP1Q9H875 184 aaPredicted RBP21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms