RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 RRP9O43818 475 aaKnown RBP17.34■□□□□ 0.37
CDH1-213ENST00000612417 KDM4AO75164 1064 aa17.34■□□□□ 0.37
CDH1-213ENST00000612417 CYP21A2P08686 494 aa17.34■□□□□ 0.37
CDH1-213ENST00000612417 AMIGO3Q86WK7 504 aa17.34■□□□□ 0.37
CDH1-213ENST00000612417 BCL2L12Q9HB09 334 aa17.34■□□□□ 0.37
CDH1-213ENST00000612417 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.34■□□□□ 0.37
CDH1-213ENST00000612417 NDUFB9Q9Y6M9 179 aa17.34■□□□□ 0.37
CDH1-213ENST00000612417 DDX60Q8IY21 1712 aaKnown RBP17.34■□□□□ 0.37
CDH1-213ENST00000612417 ADCY5O95622 1261 aa17.33■□□□□ 0.37
CDH1-213ENST00000612417 HMGB1P09429 215 aaKnown RBP17.33■□□□□ 0.37
CDH1-213ENST00000612417 ERFEQ4G0M1 354 aa17.33■□□□□ 0.37
CDH1-213ENST00000612417 HELLSQ9NRZ9 838 aa17.33■□□□□ 0.37
CDH1-213ENST00000612417 SCN7AQ01118 1682 aa17.33■□□□□ 0.36
CDH1-213ENST00000612417 RGL2O15211 777 aa17.33■□□□□ 0.36
CDH1-213ENST00000612417 CCDC192P0DO97 292 aa17.33■□□□□ 0.36
CDH1-213ENST00000612417 CCDC129Q6ZRS4 1044 aa17.33■□□□□ 0.36
CDH1-213ENST00000612417 DDX46Q7L014 1031 aaKnown RBP17.33■□□□□ 0.36
CDH1-213ENST00000612417 FERMT3Q86UX7 667 aa17.33■□□□□ 0.36
CDH1-213ENST00000612417 SEC62Q99442 399 aaKnown RBP17.33■□□□□ 0.36
CDH1-213ENST00000612417 MPHOSPH8Q99549 860 aa17.33■□□□□ 0.36
CDH1-213ENST00000612417 DSCC1Q9BVC3 393 aa17.33■□□□□ 0.36
CDH1-213ENST00000612417 SEC31BQ9NQW1 1179 aa17.33■□□□□ 0.36
CDH1-213ENST00000612417 KIAA2012Q0VF49 1180 aa17.32■□□□□ 0.36
CDH1-213ENST00000612417 RXRBP28702 533 aa17.32■□□□□ 0.36
CDH1-213ENST00000612417 ADORA1P30542 326 aa17.32■□□□□ 0.36
CDH1-213ENST00000612417 ATP2B3Q16720 1220 aa17.32■□□□□ 0.36
CDH1-213ENST00000612417 SLC27A3Q5K4L6 730 aa17.32■□□□□ 0.36
CDH1-213ENST00000612417 CCDC158Q5M9N0 1113 aa17.32■□□□□ 0.36
CDH1-213ENST00000612417 Q6ZUG5 572 aa17.32■□□□□ 0.36
CDH1-213ENST00000612417 NBPF5PQ86XG9 351 aaPredicted RBP17.32■□□□□ 0.36
CDH1-213ENST00000612417 XAGE2Q96GT9 111 aa17.32■□□□□ 0.36
CDH1-213ENST00000612417 LLPHQ9BRT6 129 aaKnown RBP17.32■□□□□ 0.36
CDH1-213ENST00000612417 PAG1Q9NWQ8 432 aa17.32■□□□□ 0.36
CDH1-213ENST00000612417 IFIT1P09914 478 aaKnown RBP17.31■□□□□ 0.36
CDH1-213ENST00000612417 STK3Q13188 491 aa17.31■□□□□ 0.36
CDH1-213ENST00000612417 TTC39AQ5SRH9 613 aa17.31■□□□□ 0.36
CDH1-213ENST00000612417 NYXQ9GZU5 481 aa17.31■□□□□ 0.36
CDH1-213ENST00000612417 NUP62CLQ9H1M0 184 aa17.31■□□□□ 0.36
CDH1-213ENST00000612417 NPHP1O15259 732 aa17.3■□□□□ 0.36
CDH1-213ENST00000612417 CHGBP05060 677 aa17.3■□□□□ 0.36
CDH1-213ENST00000612417 MAP3K11Q16584 847 aa17.3■□□□□ 0.36
CDH1-213ENST00000612417 ZMYM1Q5SVZ6 1142 aa17.3■□□□□ 0.36
CDH1-213ENST00000612417 RBM43Q6ZSC3 357 aaKnown RBP17.3■□□□□ 0.36
CDH1-213ENST00000612417 SMARCC2Q8TAQ2 1214 aa17.3■□□□□ 0.36
CDH1-213ENST00000612417 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.3■□□□□ 0.36
CDH1-213ENST00000612417 LEO1Q8WVC0 666 aaPredicted RBP17.3■□□□□ 0.36
CDH1-213ENST00000612417 SPATA32Q96LK8 384 aa17.3■□□□□ 0.36
CDH1-213ENST00000612417 AGXT2Q9BYV1 514 aa17.3■□□□□ 0.36
CDH1-213ENST00000612417 LAMB2P55268 1798 aa17.3■□□□□ 0.36
CDH1-213ENST00000612417 RIC1Q4ADV7 1423 aa17.3■□□□□ 0.36
CDH1-213ENST00000612417 IGHMBP2P38935 993 aaKnown RBP17.3■□□□□ 0.36
CDH1-213ENST00000612417 TPRNQ4KMQ1 711 aa17.3■□□□□ 0.36
CDH1-213ENST00000612417 FAM173BQ6P4H8 233 aa17.3■□□□□ 0.36
CDH1-213ENST00000612417 DDX19AQ9NUU7 478 aaKnown RBP17.3■□□□□ 0.36
CDH1-213ENST00000612417 R3HCC1Q9Y3T6 440 aaKnown RBP17.3■□□□□ 0.36
CDH1-213ENST00000612417 GOLIM4O00461 696 aa17.29■□□□□ 0.36
CDH1-213ENST00000612417 JAK2O60674 1132 aa17.29■□□□□ 0.36
CDH1-213ENST00000612417 PFKFB2O60825 505 aa17.29■□□□□ 0.36
CDH1-213ENST00000612417 LIG1P18858 919 aa17.29■□□□□ 0.36
CDH1-213ENST00000612417 RESTQ13127 1097 aa17.29■□□□□ 0.36
CDH1-213ENST00000612417 STOX1Q6ZVD7 989 aa17.29■□□□□ 0.36
CDH1-213ENST00000612417 DHX32Q7L7V1 743 aaKnown RBP17.29■□□□□ 0.36
CDH1-213ENST00000612417 HELBQ8NG08 1087 aaPredicted RBP17.29■□□□□ 0.36
CDH1-213ENST00000612417 ZSCAN16Q9H4T2 348 aaPredicted RBP17.29■□□□□ 0.36
CDH1-213ENST00000612417 MROH5Q6ZUA9 1318 aa17.29■□□□□ 0.36
CDH1-213ENST00000612417 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.28■□□□□ 0.36
CDH1-213ENST00000612417 PDE8BO95263 885 aa17.28■□□□□ 0.36
CDH1-213ENST00000612417 PIBF1Q8WXW3 757 aa17.28■□□□□ 0.36
CDH1-213ENST00000612417 BRF1Q92994 677 aa17.28■□□□□ 0.36
CDH1-213ENST00000612417 SCRN1Q12765 414 aa17.28■□□□□ 0.36
CDH1-213ENST00000612417 HSP90AA2PQ14568 343 aaPredicted RBP17.28■□□□□ 0.36
CDH1-213ENST00000612417 TPTE2Q6XPS3 522 aa17.28■□□□□ 0.36
CDH1-213ENST00000612417 FAM200AQ8TCP9 573 aa17.28■□□□□ 0.36
CDH1-213ENST00000612417 C4AP0C0L4 1744 aa17.28■□□□□ 0.36
CDH1-213ENST00000612417 ADRA2BP18089 450 aa17.27■□□□□ 0.36
CDH1-213ENST00000612417 EXOSC10Q01780 885 aaKnown RBP17.27■□□□□ 0.36
CDH1-213ENST00000612417 FKBP4Q02790 459 aaKnown RBP eCLIP17.27■□□□□ 0.36
CDH1-213ENST00000612417 C3orf67Q6ZVT6 689 aa17.27■□□□□ 0.36
CDH1-213ENST00000612417 CDC5LQ99459 802 aaKnown RBP17.27■□□□□ 0.36
CDH1-213ENST00000612417 MYH7P12883 1935 aa17.27■□□□□ 0.36
CDH1-213ENST00000612417 GOLGA6L4A6NEF3 574 aa17.27■□□□□ 0.35
CDH1-213ENST00000612417 FGD1P98174 961 aa17.27■□□□□ 0.35
CDH1-213ENST00000612417 PDE4CQ08493 712 aa17.27■□□□□ 0.35
CDH1-213ENST00000612417 TXNRD1Q16881 649 aa17.27■□□□□ 0.35
CDH1-213ENST00000612417 CCDC24Q8N4L8 307 aa17.27■□□□□ 0.35
CDH1-213ENST00000612417 VGLL2Q8N8G2 317 aa17.27■□□□□ 0.35
CDH1-213ENST00000612417 DACT1Q9NYF0 836 aa17.27■□□□□ 0.35
CDH1-213ENST00000612417 RTL9Q8NET4 1388 aa17.26■□□□□ 0.35
CDH1-213ENST00000612417 APBA3O96018 575 aa17.26■□□□□ 0.35
CDH1-213ENST00000612417 HMGN5P82970 282 aaKnown RBP17.26■□□□□ 0.35
CDH1-213ENST00000612417 TYRO3Q06418 890 aa17.26■□□□□ 0.35
CDH1-213ENST00000612417 PUM3Q15397 648 aaKnown RBP17.26■□□□□ 0.35
CDH1-213ENST00000612417 NAA16Q6N069 864 aaPredicted RBP17.26■□□□□ 0.35
CDH1-213ENST00000612417 FBXL16Q8N461 479 aa17.26■□□□□ 0.35
CDH1-213ENST00000612417 TNMDQ9H2S6 317 aa17.26■□□□□ 0.35
CDH1-213ENST00000612417 CLSTN2Q9H4D0 955 aa17.26■□□□□ 0.35
CDH1-213ENST00000612417 TFIP11Q9UBB9 837 aaKnown RBP17.26■□□□□ 0.35
CDH1-213ENST00000612417 MRVI1Q9Y6F6 885 aa17.26■□□□□ 0.35
CDH1-213ENST00000612417 UBR3Q6ZT12 1888 aa17.26■□□□□ 0.35
CDH1-213ENST00000612417 RNF113AO15541 343 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms