RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 KRT222Q8N1A0 295 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 CCDC150Q8NCX0 1101 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 IP6K1Q92551 441 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 TRIM47Q96LD4 638 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 HINFPQ9BQA5 517 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 KDM5DQ9BY66 1539 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 METP08581 1390 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 TTC37Q6PGP7 1564 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 EXOC5O00471 708 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 NEMFO60524 1076 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 ZPR1O75312 459 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 MBD4O95243 580 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 SLU7O95391 586 aaKnown RBP4.35□□□□□ -1.71
RNF38-210ENST00000611646 YEATS4O95619 227 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 SYCP1Q15431 976 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 ZNF589Q86UQ0 364 aaPredicted RBP4.35□□□□□ -1.71
RNF38-210ENST00000611646 SIRT1Q96EB6 747 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 CLSTN2Q9H4D0 955 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 PLEKHA4Q9H4M7 779 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 GOPCQ9HD26 462 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 DDX21Q9NR30 783 aaKnown RBP eCLIP4.35□□□□□ -1.71
RNF38-210ENST00000611646 GUCA1BQ9UMX6 200 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 VWA3AA6NCI4 1184 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 IRS4O14654 1257 aaPredicted RBP4.35□□□□□ -1.71
RNF38-210ENST00000611646 ATP2C2O75185 946 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 TRIM21P19474 475 aaKnown RBP4.35□□□□□ -1.71
RNF38-210ENST00000611646 ATP6V1AP38606 617 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 SSR1P43307 286 aaKnown RBP4.35□□□□□ -1.71
RNF38-210ENST00000611646 ZAP70P43403 619 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 PICALMQ13492 652 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 PNOCQ13519 176 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 TTF1Q15361 905 aaPredicted RBP4.35□□□□□ -1.71
RNF38-210ENST00000611646 TMEM132AQ24JP5 1023 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 HS1BP3Q53T59 392 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 TCERG1LQ5VWI1 586 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 TTC6Q86TZ1 520 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 ZNF397Q8NF99 534 aaPredicted RBP4.35□□□□□ -1.71
RNF38-210ENST00000611646 XAGE2Q96GT9 111 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 KAT14Q9H8E8 782 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 BCL2L12Q9HB09 334 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 MTMR6Q9Y217 621 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 YEATS2Q9ULM3 1422 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 KIAA0754O94854 1291 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 UBA7P41226 1012 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 FAM160A1Q05DH4 1040 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 BMS1Q14692 1282 aaKnown RBP4.35□□□□□ -1.71
RNF38-210ENST00000611646 ZNF569Q5MCW4 686 aa4.35□□□□□ -1.71
RNF38-210ENST00000611646 PUS7Q96PZ0 661 aaKnown RBP4.35□□□□□ -1.71
RNF38-210ENST00000611646 NIP7Q9Y221 180 aaKnown RBP eCLIP4.35□□□□□ -1.71
RNF38-210ENST00000611646 ITGA6P23229 1130 aa4.34□□□□□ -1.71
RNF38-210ENST00000611646 STAT6P42226 847 aa4.34□□□□□ -1.71
RNF38-210ENST00000611646 PRPF4BQ13523 1007 aaKnown RBP4.34□□□□□ -1.71
RNF38-210ENST00000611646 GCKRQ14397 625 aa4.34□□□□□ -1.71
RNF38-210ENST00000611646 ZNF827Q17R98 1081 aa4.34□□□□□ -1.71
RNF38-210ENST00000611646 LRRC24Q50LG9 513 aa4.34□□□□□ -1.71
RNF38-210ENST00000611646 EEF2KMTQ96G04 330 aa4.34□□□□□ -1.71
RNF38-210ENST00000611646 GDAP1L1Q96MZ0 367 aa4.34□□□□□ -1.71
RNF38-210ENST00000611646 METTL22Q9BUU2 404 aaPredicted RBP4.34□□□□□ -1.71
RNF38-210ENST00000611646 LSG1Q9H089 658 aaKnown RBP4.34□□□□□ -1.71
RNF38-210ENST00000611646 RNF41Q9H4P4 317 aaPredicted RBP4.34□□□□□ -1.71
RNF38-210ENST00000611646 BMP2KQ9NSY1 1161 aaPredicted RBP4.34□□□□□ -1.71
RNF38-210ENST00000611646 SBNO1A3KN83 1393 aa4.34□□□□□ -1.71
RNF38-210ENST00000611646 C6orf229H3BNL8 230 aa4.34□□□□□ -1.71
RNF38-210ENST00000611646 POLR2DO15514 142 aaKnown RBP4.34□□□□□ -1.71
RNF38-210ENST00000611646 GPAA1O43292 621 aa4.34□□□□□ -1.71
RNF38-210ENST00000611646 BEND3Q5T5X7 828 aa4.34□□□□□ -1.71
RNF38-210ENST00000611646 CTR9Q6PD62 1173 aa4.34□□□□□ -1.71
RNF38-210ENST00000611646 DZIP3Q86Y13 1208 aaKnown RBP4.34□□□□□ -1.71
RNF38-210ENST00000611646 MYRIPQ8NFW9 859 aa4.34□□□□□ -1.71
RNF38-210ENST00000611646 USP28Q96RU2 1077 aa4.34□□□□□ -1.71
RNF38-210ENST00000611646 VPS16Q9H269 839 aa4.34□□□□□ -1.71
RNF38-210ENST00000611646 SYNMO15061 1565 aa4.34□□□□□ -1.71
RNF38-210ENST00000611646 TMCO5BA8MYB1 307 aa4.34□□□□□ -1.71
RNF38-210ENST00000611646 E7EWF7 191 aa4.34□□□□□ -1.71
RNF38-210ENST00000611646 RDXP35241 583 aaKnown RBP4.34□□□□□ -1.71
RNF38-210ENST00000611646 ADKP55263 362 aaKnown RBP4.34□□□□□ -1.71
RNF38-210ENST00000611646 HLTFQ14527 1009 aaKnown RBP eCLIP4.34□□□□□ -1.71
RNF38-210ENST00000611646 RNF187Q5TA31 235 aaPredicted RBP4.34□□□□□ -1.71
RNF38-210ENST00000611646 TTLL7Q6ZT98 887 aa4.34□□□□□ -1.71
RNF38-210ENST00000611646 CRACR2BQ8N4Y2 399 aaPredicted RBP4.34□□□□□ -1.71
RNF38-210ENST00000611646 SSH3Q8TE77 659 aa4.34□□□□□ -1.71
RNF38-210ENST00000611646 TAF4BQ92750 862 aa4.34□□□□□ -1.71
RNF38-210ENST00000611646 VPS18Q9P253 973 aa4.34□□□□□ -1.71
RNF38-210ENST00000611646 RSPH14Q9UHP6 348 aa4.34□□□□□ -1.71
RNF38-210ENST00000611646 CTNND2Q9UQB3 1225 aa4.34□□□□□ -1.71
RNF38-210ENST00000611646 IBTKQ9P2D0 1353 aaPredicted RBP4.34□□□□□ -1.71
RNF38-210ENST00000611646 KAT6BQ8WYB5 2073 aa4.34□□□□□ -1.72
RNF38-210ENST00000611646 MACROD2A1Z1Q3 448 aa4.34□□□□□ -1.72
RNF38-210ENST00000611646 ZNF202O95125 648 aa4.34□□□□□ -1.72
RNF38-210ENST00000611646 USP8P40818 1118 aa4.34□□□□□ -1.72
RNF38-210ENST00000611646 NOP2P46087 812 aaKnown RBP4.34□□□□□ -1.72
RNF38-210ENST00000611646 CDR1P51861 262 aa4.34□□□□□ -1.72
RNF38-210ENST00000611646 RNASE9P60153 205 aaKnown RBP4.34□□□□□ -1.72
RNF38-210ENST00000611646 UBXN1Q04323 297 aa4.34□□□□□ -1.72
RNF38-210ENST00000611646 CCDC40Q4G0X9 1142 aa4.34□□□□□ -1.72
RNF38-210ENST00000611646 PI16Q6UXB8 463 aa4.34□□□□□ -1.72
RNF38-210ENST00000611646 CLIC6Q96NY7 704 aa4.34□□□□□ -1.72
RNF38-210ENST00000611646 PPP1R9BQ96SB3 815 aa4.34□□□□□ -1.72
RNF38-210ENST00000611646 PSMB7Q99436 277 aa4.34□□□□□ -1.72
RNF38-210ENST00000611646 CARD6Q9BX69 1037 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms