RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 RSPH14Q9UHP6 348 aa18.79■□□□□ 0.6
RTN1-209ENST00000611068 ZNF652Q9Y2D9 606 aa18.79■□□□□ 0.6
RTN1-209ENST00000611068 RPS6KA4O75676 772 aa18.78■□□□□ 0.6
RTN1-209ENST00000611068 CIAO1O76071 339 aa18.78■□□□□ 0.6
RTN1-209ENST00000611068 TNNT3P45378 269 aaPredicted RBP18.78■□□□□ 0.6
RTN1-209ENST00000611068 RASEFQ8IZ41 740 aa18.78■□□□□ 0.6
RTN1-209ENST00000611068 NPHP1O15259 732 aa18.78■□□□□ 0.6
RTN1-209ENST00000611068 IFIT1P09914 478 aaKnown RBP18.78■□□□□ 0.6
RTN1-209ENST00000611068 DTNBO60941 627 aa18.77■□□□□ 0.6
RTN1-209ENST00000611068 RABEP1Q15276 862 aa18.77■□□□□ 0.6
RTN1-209ENST00000611068 AK7Q96M32 723 aa18.77■□□□□ 0.6
RTN1-209ENST00000611068 MBD3O95983 291 aa18.77■□□□□ 0.6
RTN1-209ENST00000611068 TTC39AQ5SRH9 613 aa18.77■□□□□ 0.6
RTN1-209ENST00000611068 PRPF40BQ6NWY9 871 aaKnown RBP18.77■□□□□ 0.6
RTN1-209ENST00000611068 MPHOSPH8Q99549 860 aa18.77■□□□□ 0.6
RTN1-209ENST00000611068 CNTNAP4Q9C0A0 1308 aa18.77■□□□□ 0.59
RTN1-209ENST00000611068 RFC4P35249 363 aa18.76■□□□□ 0.59
RTN1-209ENST00000611068 PARP10Q53GL7 1025 aa18.76■□□□□ 0.59
RTN1-209ENST00000611068 HAUS7Q99871 368 aa18.76■□□□□ 0.59
RTN1-209ENST00000611068 EFCC1Q9HA90 598 aa18.76■□□□□ 0.59
RTN1-209ENST00000611068 MCCP23508 829 aa18.76■□□□□ 0.59
RTN1-209ENST00000611068 PAG1Q9NWQ8 432 aa18.76■□□□□ 0.59
RTN1-209ENST00000611068 PLCB2Q00722 1185 aa18.75■□□□□ 0.59
RTN1-209ENST00000611068 RUFY2Q8WXA3 655 aa18.75■□□□□ 0.59
RTN1-209ENST00000611068 SETDB2Q96T68 719 aa18.75■□□□□ 0.59
RTN1-209ENST00000611068 APPP05067 770 aa18.75■□□□□ 0.59
RTN1-209ENST00000611068 ZNF609O15014 1411 aa18.74■□□□□ 0.59
RTN1-209ENST00000611068 NOP2P46087 812 aaKnown RBP18.74■□□□□ 0.59
RTN1-209ENST00000611068 COL9A3Q14050 684 aaPredicted RBP18.74■□□□□ 0.59
RTN1-209ENST00000611068 SYCP1Q15431 976 aa18.74■□□□□ 0.59
RTN1-209ENST00000611068 KMT5BQ4FZB7 885 aa18.74■□□□□ 0.59
RTN1-209ENST00000611068 SLC51AQ86UW1 340 aa18.74■□□□□ 0.59
RTN1-209ENST00000611068 NBPF5PQ86XG9 351 aaPredicted RBP18.74■□□□□ 0.59
RTN1-209ENST00000611068 NARFQ9UHQ1 456 aa18.74■□□□□ 0.59
RTN1-209ENST00000611068 ANKRD36CQ5JPF3 1778 aa18.74■□□□□ 0.59
RTN1-209ENST00000611068 CCDC158Q5M9N0 1113 aa18.74■□□□□ 0.59
RTN1-209ENST00000611068 TRAPPC3LQ5T215 181 aa18.74■□□□□ 0.59
RTN1-209ENST00000611068 CYP2C19P33261 490 aa18.73■□□□□ 0.59
RTN1-209ENST00000611068 EP400NLQ6ZTU2 488 aa18.73■□□□□ 0.59
RTN1-209ENST00000611068 AKAP2Q9Y2D5 859 aa18.73■□□□□ 0.59
RTN1-209ENST00000611068 TAF6LQ9Y6J9 622 aa18.73■□□□□ 0.59
RTN1-209ENST00000611068 RAD50Q92878 1312 aa18.73■□□□□ 0.59
RTN1-209ENST00000611068 RIC1Q4ADV7 1423 aa18.73■□□□□ 0.59
RTN1-209ENST00000611068 COL5A3P25940 1745 aaPredicted RBP18.73■□□□□ 0.59
RTN1-209ENST00000611068 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.73■□□□□ 0.59
RTN1-209ENST00000611068 AP5Z1O43299 807 aa18.73■□□□□ 0.59
RTN1-209ENST00000611068 HSPA4P34932 840 aa18.73■□□□□ 0.59
RTN1-209ENST00000611068 ZAP70P43403 619 aa18.73■□□□□ 0.59
RTN1-209ENST00000611068 UVSSAQ2YD98 709 aa18.73■□□□□ 0.59
RTN1-209ENST00000611068 CCDC152Q4G0S7 254 aa18.73■□□□□ 0.59
RTN1-209ENST00000611068 SNX14Q9Y5W7 946 aa18.73■□□□□ 0.59
RTN1-209ENST00000611068 CLEC4GQ6UXB4 293 aa18.72■□□□□ 0.59
RTN1-209ENST00000611068 SPC24Q8NBT2 197 aa18.72■□□□□ 0.59
RTN1-209ENST00000611068 FAM53CQ9NYF3 392 aa18.72■□□□□ 0.59
RTN1-209ENST00000611068 IQSEC3Q9UPP2 1182 aaPredicted RBP18.72■□□□□ 0.59
RTN1-209ENST00000611068 PDE8BO95263 885 aa18.72■□□□□ 0.59
RTN1-209ENST00000611068 RBM6P78332 1123 aaKnown RBP18.72■□□□□ 0.59
RTN1-209ENST00000611068 ADCK5Q3MIX3 580 aa18.72■□□□□ 0.59
RTN1-209ENST00000611068 RC3H1Q5TC82 1133 aaKnown RBP18.72■□□□□ 0.59
RTN1-209ENST00000611068 C16orf45Q96MC5 204 aaPredicted RBP18.72■□□□□ 0.59
RTN1-209ENST00000611068 CWC22Q9HCG8 908 aaKnown RBP18.72■□□□□ 0.59
RTN1-209ENST00000611068 GPR108Q9NPR9 543 aa18.72■□□□□ 0.59
RTN1-209ENST00000611068 ST18O60284 1047 aa18.71■□□□□ 0.59
RTN1-209ENST00000611068 GADD45BO75293 160 aaPredicted RBP18.71■□□□□ 0.59
RTN1-209ENST00000611068 PHKA1P46020 1223 aa18.71■□□□□ 0.59
RTN1-209ENST00000611068 GYS2P54840 703 aa18.71■□□□□ 0.59
RTN1-209ENST00000611068 FOXD4L6Q3SYB3 417 aaPredicted RBP18.71■□□□□ 0.59
RTN1-209ENST00000611068 FOXD4L3Q6VB84 417 aaPredicted RBP18.71■□□□□ 0.59
RTN1-209ENST00000611068 RBM8AQ9Y5S9 174 aaKnown RBP18.71■□□□□ 0.59
RTN1-209ENST00000611068 CNPY4Q8N129 248 aa18.71■□□□□ 0.59
RTN1-209ENST00000611068 VGLL2Q8N8G2 317 aa18.71■□□□□ 0.59
RTN1-209ENST00000611068 GDPD2Q9HCC8 539 aa18.71■□□□□ 0.59
RTN1-209ENST00000611068 ABCC12Q96J65 1359 aa18.71■□□□□ 0.59
RTN1-209ENST00000611068 COL4A1P02462 1669 aa18.71■□□□□ 0.59
RTN1-209ENST00000611068 TAF1P21675 1872 aa18.71■□□□□ 0.59
RTN1-209ENST00000611068 DHX16O60231 1041 aaKnown RBP18.7■□□□□ 0.58
RTN1-209ENST00000611068 PROM2Q8N271 834 aa18.7■□□□□ 0.58
RTN1-209ENST00000611068 CCDC171Q6TFL3 1326 aa18.7■□□□□ 0.58
RTN1-209ENST00000611068 NHSQ6T4R5 1651 aa18.7■□□□□ 0.58
RTN1-209ENST00000611068 CLGNO14967 610 aa18.7■□□□□ 0.58
RTN1-209ENST00000611068 IGHMBP2P38935 993 aaKnown RBP18.7■□□□□ 0.58
RTN1-209ENST00000611068 VPS53Q5VIR6 699 aa18.7■□□□□ 0.58
RTN1-209ENST00000611068 KBTBD3Q8NAB2 608 aa18.7■□□□□ 0.58
RTN1-209ENST00000611068 TCEANC2Q96MN5 208 aa18.7■□□□□ 0.58
RTN1-209ENST00000611068 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.7■□□□□ 0.58
RTN1-209ENST00000611068 V9GYY5 206 aaPredicted RBP18.7■□□□□ 0.58
RTN1-209ENST00000611068 SMTNL1A8MU46 457 aa18.7■□□□□ 0.58
RTN1-209ENST00000611068 MCAMP43121 646 aa18.7■□□□□ 0.58
RTN1-209ENST00000611068 FAM184AQ8NB25 1140 aa18.7■□□□□ 0.58
RTN1-209ENST00000611068 CELF1Q92879 486 aaKnown RBP18.7■□□□□ 0.58
RTN1-209ENST00000611068 BRWD3Q6RI45 1802 aa18.69■□□□□ 0.58
RTN1-209ENST00000611068 SBF2Q86WG5 1849 aa18.69■□□□□ 0.58
RTN1-209ENST00000611068 KDM4AO75164 1064 aa18.69■□□□□ 0.58
RTN1-209ENST00000611068 CASTP20810 708 aaKnown RBP18.69■□□□□ 0.58
RTN1-209ENST00000611068 GTF2A1P52655 376 aaPredicted RBP18.69■□□□□ 0.58
RTN1-209ENST00000611068 TPRNQ4KMQ1 711 aa18.69■□□□□ 0.58
RTN1-209ENST00000611068 MYH3P11055 1940 aa18.68■□□□□ 0.58
RTN1-209ENST00000611068 A0A0G2JLW4 131 aa18.68■□□□□ 0.58
RTN1-209ENST00000611068 BCAMP50895 628 aa18.68■□□□□ 0.58
RTN1-209ENST00000611068 JAKMIP1Q96N16 626 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms