RNA–Protein interactions for RNA: ENST00000609959.1

CCDC144B-206, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 5

Gene CCDC144B, Length 808 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-206ENST00000609959 YIPF2Q9BWQ6 316 aa7.04□□□□□ -1.28
CCDC144B-206ENST00000609959 TMEM63CQ9P1W3 806 aa7.04□□□□□ -1.28
CCDC144B-206ENST00000609959 KANSL3Q9P2N6 904 aa7.04□□□□□ -1.28
CCDC144B-206ENST00000609959 ZMIZ1Q9ULJ6 1067 aa7.04□□□□□ -1.28
CCDC144B-206ENST00000609959 FAM95CA0A1B0GW59 222 aa7.03□□□□□ -1.28
CCDC144B-206ENST00000609959 NFKBIBQ15653 356 aa7.03□□□□□ -1.28
CCDC144B-206ENST00000609959 SGO2Q562F6 1265 aa7.03□□□□□ -1.28
CCDC144B-206ENST00000609959 VSIG10LQ86VR7 867 aa7.03□□□□□ -1.28
CCDC144B-206ENST00000609959 SMG8Q8ND04 991 aaKnown RBP7.03□□□□□ -1.28
CCDC144B-206ENST00000609959 SUGCTQ9HAC7 445 aa7.03□□□□□ -1.28
CCDC144B-206ENST00000609959 DZANK1Q9NVP4 752 aa7.03□□□□□ -1.28
CCDC144B-206ENST00000609959 CCDC39Q9UFE4 941 aa7.03□□□□□ -1.28
CCDC144B-206ENST00000609959 ZNF777Q9ULD5 760 aaPredicted RBP7.03□□□□□ -1.28
CCDC144B-206ENST00000609959 ZBTB39O15060 712 aa7.02□□□□□ -1.29
CCDC144B-206ENST00000609959 F13BP05160 661 aa7.02□□□□□ -1.29
CCDC144B-206ENST00000609959 IKBKEQ14164 716 aa7.02□□□□□ -1.29
CCDC144B-206ENST00000609959 CAPN12Q6ZSI9 719 aa7.02□□□□□ -1.29
CCDC144B-206ENST00000609959 TP53INP2Q8IXH6 220 aa7.02□□□□□ -1.29
CCDC144B-206ENST00000609959 TMEM102Q8N9M5 508 aaPredicted RBP7.02□□□□□ -1.29
CCDC144B-206ENST00000609959 BSNDQ8WZ55 320 aa7.02□□□□□ -1.29
CCDC144B-206ENST00000609959 CNTN3Q9P232 1028 aa7.02□□□□□ -1.29
CCDC144B-206ENST00000609959 SOX13Q9UN79 622 aa7.02□□□□□ -1.29
CCDC144B-206ENST00000609959 CYP26A1O43174 497 aa7.01□□□□□ -1.29
CCDC144B-206ENST00000609959 PRNPP04156 253 aa7.01□□□□□ -1.29
CCDC144B-206ENST00000609959 JUNBP17275 347 aaPredicted RBP7.01□□□□□ -1.29
CCDC144B-206ENST00000609959 C1orf127Q8N9H9 656 aa7.01□□□□□ -1.29
CCDC144B-206ENST00000609959 AGBL5Q8NDL9 886 aa7.01□□□□□ -1.29
CCDC144B-206ENST00000609959 STK32AQ8WU08 396 aa7.01□□□□□ -1.29
CCDC144B-206ENST00000609959 USP26Q9BXU7 913 aa7.01□□□□□ -1.29
CCDC144B-206ENST00000609959 TMPRSS13Q9BYE2 586 aa7.01□□□□□ -1.29
CCDC144B-206ENST00000609959 BSDC1Q9NW68 430 aaPredicted RBP7.01□□□□□ -1.29
CCDC144B-206ENST00000609959 NFKBIEO00221 500 aa7□□□□□ -1.29
CCDC144B-206ENST00000609959 MSMPQ1L6U9 139 aa7□□□□□ -1.29
CCDC144B-206ENST00000609959 EXOSC6Q5RKV6 272 aaKnown RBP7□□□□□ -1.29
CCDC144B-206ENST00000609959 CLP1Q92989 425 aaKnown RBP7□□□□□ -1.29
CCDC144B-206ENST00000609959 SOX17Q9H6I2 414 aaPredicted RBP7□□□□□ -1.29
CCDC144B-206ENST00000609959 SOX1O00570 391 aaPredicted RBP6.99□□□□□ -1.29
CCDC144B-206ENST00000609959 ATG7O95352 703 aa6.99□□□□□ -1.29
CCDC144B-206ENST00000609959 C8orf34Q49A92 452 aa6.99□□□□□ -1.29
CCDC144B-206ENST00000609959 LCE1DQ5T752 114 aa6.99□□□□□ -1.29
CCDC144B-206ENST00000609959 OGFOD2Q6N063 350 aa6.99□□□□□ -1.29
CCDC144B-206ENST00000609959 TBC1D32Q96NH3 1257 aa6.99□□□□□ -1.29
CCDC144B-206ENST00000609959 TIAF1O95411 115 aa6.98□□□□□ -1.29
CCDC144B-206ENST00000609959 EDN3P14138 238 aa6.98□□□□□ -1.29
CCDC144B-206ENST00000609959 DNM1Q05193 864 aaKnown RBP6.98□□□□□ -1.29
CCDC144B-206ENST00000609959 DUSP27Q5VZP5 1158 aa6.98□□□□□ -1.29
CCDC144B-206ENST00000609959 EDEM1Q92611 657 aa6.98□□□□□ -1.29
CCDC144B-206ENST00000609959 NXPE3Q969Y0 559 aa6.98□□□□□ -1.29
CCDC144B-206ENST00000609959 OSMRQ99650 979 aa6.98□□□□□ -1.29
CCDC144B-206ENST00000609959 ACPPP15309 386 aa6.97□□□□□ -1.29
CCDC144B-206ENST00000609959 CYP27A1Q02318 531 aa6.97□□□□□ -1.29
CCDC144B-206ENST00000609959 NOM1Q5C9Z4 860 aaKnown RBP6.97□□□□□ -1.29
CCDC144B-206ENST00000609959 TMEM164Q5U3C3 297 aa6.97□□□□□ -1.29
CCDC144B-206ENST00000609959 CBLL1Q75N03 491 aa6.97□□□□□ -1.29
CCDC144B-206ENST00000609959 ATCAYQ86WG3 371 aa6.97□□□□□ -1.29
CCDC144B-206ENST00000609959 POU5F2Q8N7G0 328 aa6.97□□□□□ -1.29
CCDC144B-206ENST00000609959 FBLIM1Q8WUP2 373 aa6.97□□□□□ -1.29
CCDC144B-206ENST00000609959 ZFYVE1Q9HBF4 777 aa6.97□□□□□ -1.29
CCDC144B-206ENST00000609959 LOC100289279A0A1B0GTE1 492 aa6.96□□□□□ -1.3
CCDC144B-206ENST00000609959 TRPA1O75762 1119 aa6.96□□□□□ -1.3
CCDC144B-206ENST00000609959 MZF1P28698 734 aaPredicted RBP6.96□□□□□ -1.3
CCDC144B-206ENST00000609959 HP1BP3Q5SSJ5 553 aaPredicted RBP6.96□□□□□ -1.3
CCDC144B-206ENST00000609959 ALKBH2Q6NS38 261 aa6.96□□□□□ -1.3
CCDC144B-206ENST00000609959 ZAR1Q86SH2 424 aa6.96□□□□□ -1.3
CCDC144B-206ENST00000609959 FLCNQ8NFG4 579 aa6.96□□□□□ -1.3
CCDC144B-206ENST00000609959 JAG1P78504 1218 aa6.95□□□□□ -1.3
CCDC144B-206ENST00000609959 SOX4Q06945 474 aaPredicted RBP6.95□□□□□ -1.3
CCDC144B-206ENST00000609959 MAP7Q14244 749 aa6.95□□□□□ -1.3
CCDC144B-206ENST00000609959 HGSNATQ68CP4 663 aa6.95□□□□□ -1.3
CCDC144B-206ENST00000609959 VN1R5Q7Z5H4 357 aa6.95□□□□□ -1.3
CCDC144B-206ENST00000609959 ASAP3Q8TDY4 903 aa6.95□□□□□ -1.3
CCDC144B-206ENST00000609959 EZH1Q92800 747 aaPredicted RBP6.95□□□□□ -1.3
CCDC144B-206ENST00000609959 KRTAP4-7Q9BYR0 210 aa6.95□□□□□ -1.3
CCDC144B-206ENST00000609959 PHACTR2O75167 634 aa6.94□□□□□ -1.3
CCDC144B-206ENST00000609959 PDGFAP04085 211 aa6.94□□□□□ -1.3
CCDC144B-206ENST00000609959 C8AP07357 584 aa6.94□□□□□ -1.3
CCDC144B-206ENST00000609959 DRD2P14416 443 aa6.94□□□□□ -1.3
CCDC144B-206ENST00000609959 ITGB5P18084 799 aa6.94□□□□□ -1.3
CCDC144B-206ENST00000609959 ATP2B4P23634 1241 aa6.94□□□□□ -1.3
CCDC144B-206ENST00000609959 GSTM4Q03013 218 aa6.94□□□□□ -1.3
CCDC144B-206ENST00000609959 EHHADHQ08426 723 aa6.94□□□□□ -1.3
CCDC144B-206ENST00000609959 CDPF1Q6NVV7 123 aa6.94□□□□□ -1.3
CCDC144B-206ENST00000609959 HELQQ8TDG4 1101 aa6.94□□□□□ -1.3
CCDC144B-206ENST00000609959 HHIPQ96QV1 700 aa6.94□□□□□ -1.3
CCDC144B-206ENST00000609959 ZKSCAN3Q9BRR0 538 aa6.94□□□□□ -1.3
CCDC144B-206ENST00000609959 GGNBP2Q9H3C7 697 aa6.94□□□□□ -1.3
CCDC144B-206ENST00000609959 PRKAG2Q9UGJ0 569 aa6.94□□□□□ -1.3
CCDC144B-206ENST00000609959 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.93□□□□□ -1.3
CCDC144B-206ENST00000609959 BIN1O00499 593 aa6.93□□□□□ -1.3
CCDC144B-206ENST00000609959 C2CD4AQ8NCU7 369 aaPredicted RBP6.93□□□□□ -1.3
CCDC144B-206ENST00000609959 CHRDQ9H2X0 955 aa6.93□□□□□ -1.3
CCDC144B-206ENST00000609959 SEPT3Q9UH03 358 aa6.93□□□□□ -1.3
CCDC144B-206ENST00000609959 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.93□□□□□ -1.3
CCDC144B-206ENST00000609959 ESRRAP11474 423 aaPredicted RBP6.92□□□□□ -1.3
CCDC144B-206ENST00000609959 USP5P45974 858 aa6.92□□□□□ -1.3
CCDC144B-206ENST00000609959 SRPK2P78362 688 aaKnown RBP6.92□□□□□ -1.3
CCDC144B-206ENST00000609959 SNX29Q8TEQ0 813 aa6.92□□□□□ -1.3
CCDC144B-206ENST00000609959 BHLHE41Q9C0J9 482 aaPredicted RBP6.92□□□□□ -1.3
CCDC144B-206ENST00000609959 EREGO14944 169 aa6.91□□□□□ -1.3
CCDC144B-206ENST00000609959 CYP11A1P05108 521 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms