RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 R3HDMLQ9H3Y0 253 aa17.23■□□□□ 0.35
CTSA-218ENST00000607814 SMC4Q9NTJ3 1288 aa17.23■□□□□ 0.35
CTSA-218ENST00000607814 MAP3K11Q16584 847 aa17.22■□□□□ 0.35
CTSA-218ENST00000607814 OTOP1Q7RTM1 612 aa17.22■□□□□ 0.35
CTSA-218ENST00000607814 IFNL1Q8IU54 200 aa17.22■□□□□ 0.35
CTSA-218ENST00000607814 MINPP1Q9UNW1 487 aa17.22■□□□□ 0.35
CTSA-218ENST00000607814 CHMP3Q9Y3E7 222 aa17.22■□□□□ 0.35
CTSA-218ENST00000607814 TRIM17Q9Y577 477 aa17.22■□□□□ 0.35
CTSA-218ENST00000607814 RBBP6Q7Z6E9 1792 aaKnown RBP17.22■□□□□ 0.35
CTSA-218ENST00000607814 ZNF646O15015 1829 aaPredicted RBP17.21■□□□□ 0.35
CTSA-218ENST00000607814 ITGA6P23229 1130 aa17.21■□□□□ 0.35
CTSA-218ENST00000607814 CCT4P50991 539 aaKnown RBP17.21■□□□□ 0.35
CTSA-218ENST00000607814 FOXO4P98177 505 aa17.21■□□□□ 0.35
CTSA-218ENST00000607814 SRCIN1Q9C0H9 1055 aa17.21■□□□□ 0.35
CTSA-218ENST00000607814 C9orf78Q9NZ63 289 aaPredicted RBP17.21■□□□□ 0.35
CTSA-218ENST00000607814 ANGEL1Q9UNK9 670 aaKnown RBP17.21■□□□□ 0.35
CTSA-218ENST00000607814 LEMD3Q9Y2U8 911 aa17.21■□□□□ 0.35
CTSA-218ENST00000607814 CEP290O15078 2479 aa17.2■□□□□ 0.34
CTSA-218ENST00000607814 GRM8O00222 908 aa17.2■□□□□ 0.34
CTSA-218ENST00000607814 SLC10A4Q96EP9 437 aa17.2■□□□□ 0.34
CTSA-218ENST00000607814 ERO1AQ96HE7 468 aa17.2■□□□□ 0.34
CTSA-218ENST00000607814 ZBED3Q96IU2 234 aaPredicted RBP17.2■□□□□ 0.34
CTSA-218ENST00000607814 PLA2G12BQ9BX93 195 aa17.2■□□□□ 0.34
CTSA-218ENST00000607814 NOB1Q9ULX3 412 aaKnown RBP17.2■□□□□ 0.34
CTSA-218ENST00000607814 PPP2R3BQ9Y5P8 575 aa17.2■□□□□ 0.34
CTSA-218ENST00000607814 LAMB1P07942 1786 aa17.2■□□□□ 0.34
CTSA-218ENST00000607814 POTEFA5A3E0 1075 aa17.19■□□□□ 0.34
CTSA-218ENST00000607814 PPP1R12BO60237 982 aaPredicted RBP17.19■□□□□ 0.34
CTSA-218ENST00000607814 SASH1O94885 1247 aa17.19■□□□□ 0.34
CTSA-218ENST00000607814 CSF1RP07333 972 aa17.19■□□□□ 0.34
CTSA-218ENST00000607814 NBPF7P0C2Y1 421 aaPredicted RBP17.19■□□□□ 0.34
CTSA-218ENST00000607814 TTLL5Q6EMB2 1281 aa17.19■□□□□ 0.34
CTSA-218ENST00000607814 OTUD7BQ6GQQ9 843 aa17.19■□□□□ 0.34
CTSA-218ENST00000607814 LMBR1LQ6UX01 489 aa17.19■□□□□ 0.34
CTSA-218ENST00000607814 FBXW7Q969H0 707 aa17.19■□□□□ 0.34
CTSA-218ENST00000607814 ARMC5Q96C12 935 aa17.19■□□□□ 0.34
CTSA-218ENST00000607814 SUCLG2Q96I99 432 aa17.19■□□□□ 0.34
CTSA-218ENST00000607814 MXD3Q9BW11 206 aa17.19■□□□□ 0.34
CTSA-218ENST00000607814 PTPN22Q9Y2R2 807 aa17.19■□□□□ 0.34
CTSA-218ENST00000607814 PRKG1Q13976 671 aa17.18■□□□□ 0.34
CTSA-218ENST00000607814 ZNF594Q96JF6 807 aaPredicted RBP17.18■□□□□ 0.34
CTSA-218ENST00000607814 DEFB129Q9H1M3 183 aa17.18■□□□□ 0.34
CTSA-218ENST00000607814 SNAP23O00161 211 aa17.17■□□□□ 0.34
CTSA-218ENST00000607814 ALDH1L1O75891 902 aa17.17■□□□□ 0.34
CTSA-218ENST00000607814 IGHMBP2P38935 993 aaKnown RBP17.17■□□□□ 0.34
CTSA-218ENST00000607814 ALDH1L2Q3SY69 923 aa17.17■□□□□ 0.34
CTSA-218ENST00000607814 MTMR14Q8NCE2 650 aa17.17■□□□□ 0.34
CTSA-218ENST00000607814 KAZALD1Q96I82 304 aa17.17■□□□□ 0.34
CTSA-218ENST00000607814 MYH3P11055 1940 aa17.17■□□□□ 0.34
CTSA-218ENST00000607814 SPEF2Q9C093 1822 aa17.17■□□□□ 0.34
CTSA-218ENST00000607814 IGF2BP3O00425 579 aaKnown RBP eCLIP17.16■□□□□ 0.34
CTSA-218ENST00000607814 RARSP54136 660 aaKnown RBP17.16■□□□□ 0.34
CTSA-218ENST00000607814 KIAA0825Q8IV33 1275 aa17.16■□□□□ 0.34
CTSA-218ENST00000607814 HELBQ8NG08 1087 aaPredicted RBP17.16■□□□□ 0.34
CTSA-218ENST00000607814 WNK4Q96J92 1243 aa17.16■□□□□ 0.34
CTSA-218ENST00000607814 ANKRD2Q9GZV1 360 aa17.16■□□□□ 0.34
CTSA-218ENST00000607814 ZNF804BA4D1E1 1349 aa17.16■□□□□ 0.34
CTSA-218ENST00000607814 PTPRCP08575 1304 aa17.16■□□□□ 0.34
CTSA-218ENST00000607814 ANKRD18BA2A2Z9 1011 aa17.15■□□□□ 0.34
CTSA-218ENST00000607814 FXR1P51114 621 aaKnown RBP eCLIP17.15■□□□□ 0.34
CTSA-218ENST00000607814 DLGAP5Q15398 846 aa17.15■□□□□ 0.34
CTSA-218ENST00000607814 SUPT20HL1Q3ZLR7 823 aa17.15■□□□□ 0.34
CTSA-218ENST00000607814 TXNRD3Q86VQ6 643 aa17.15■□□□□ 0.34
CTSA-218ENST00000607814 MPHOSPH8Q99549 860 aa17.15■□□□□ 0.34
CTSA-218ENST00000607814 EFCC1Q9HA90 598 aa17.15■□□□□ 0.34
CTSA-218ENST00000607814 TNNQ9UQP3 1299 aa17.15■□□□□ 0.34
CTSA-218ENST00000607814 TAF5LO75529 589 aa17.14■□□□□ 0.33
CTSA-218ENST00000607814 BCAR3O75815 825 aa17.14■□□□□ 0.33
CTSA-218ENST00000607814 KLRK1P26718 216 aa17.14■□□□□ 0.33
CTSA-218ENST00000607814 IFIT5Q13325 482 aaKnown RBP17.14■□□□□ 0.33
CTSA-218ENST00000607814 TESPA1A2RU30 521 aaPredicted RBP17.13■□□□□ 0.33
CTSA-218ENST00000607814 MYO1BO43795 1136 aa17.13■□□□□ 0.33
CTSA-218ENST00000607814 PLIN1O60240 522 aa17.13■□□□□ 0.33
CTSA-218ENST00000607814 GTF2IP78347 998 aa17.13■□□□□ 0.33
CTSA-218ENST00000607814 SP3Q02447 781 aa17.13■□□□□ 0.33
CTSA-218ENST00000607814 CRHR2Q13324 411 aa17.13■□□□□ 0.33
CTSA-218ENST00000607814 ARHGEF6Q15052 776 aa17.13■□□□□ 0.33
CTSA-218ENST00000607814 CD99L2Q8TCZ2 262 aa17.13■□□□□ 0.33
CTSA-218ENST00000607814 USP44Q9H0E7 712 aa17.13■□□□□ 0.33
CTSA-218ENST00000607814 BICC1Q9H694 974 aaKnown RBP17.13■□□□□ 0.33
CTSA-218ENST00000607814 SSC5DA1L4H1 1573 aa17.13■□□□□ 0.33
CTSA-218ENST00000607814 SZT2Q5T011 3432 aa17.12■□□□□ 0.33
CTSA-218ENST00000607814 EN2P19622 333 aaPredicted RBP17.12■□□□□ 0.33
CTSA-218ENST00000607814 IREB2P48200 963 aaKnown RBP17.12■□□□□ 0.33
CTSA-218ENST00000607814 CHRNDQ07001 517 aa17.12■□□□□ 0.33
CTSA-218ENST00000607814 CCDC57Q2TAC2 916 aa17.12■□□□□ 0.33
CTSA-218ENST00000607814 FRAT1Q92837 279 aaPredicted RBP17.12■□□□□ 0.33
CTSA-218ENST00000607814 CLMNQ96JQ2 1002 aa17.12■□□□□ 0.33
CTSA-218ENST00000607814 TMEM106CQ9BVX2 250 aa17.12■□□□□ 0.33
CTSA-218ENST00000607814 PUS3Q9BZE2 481 aaKnown RBP17.12■□□□□ 0.33
CTSA-218ENST00000607814 TRIOBPQ9H2D6 2365 aa17.12■□□□□ 0.33
CTSA-218ENST00000607814 ECM29Q5VYK3 1845 aa17.12■□□□□ 0.33
CTSA-218ENST00000607814 CT47B1P0C2W7 299 aaPredicted RBP17.11■□□□□ 0.33
CTSA-218ENST00000607814 FKBP1AP62942 108 aaKnown RBP17.11■□□□□ 0.33
CTSA-218ENST00000607814 TAF7LQ5H9L4 462 aa17.11■□□□□ 0.33
CTSA-218ENST00000607814 NBPF11Q86T75 865 aa17.11■□□□□ 0.33
CTSA-218ENST00000607814 ANKRD13AQ8IZ07 590 aa17.11■□□□□ 0.33
CTSA-218ENST00000607814 ANKRD44Q8N8A2 993 aa17.11■□□□□ 0.33
CTSA-218ENST00000607814 ZNF333Q96JL9 665 aa17.11■□□□□ 0.33
CTSA-218ENST00000607814 CD209Q9NNX6 404 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms