RNA–Protein interactions for RNA: ENST00000607419.1

LINC01954-201, Transcript of long intergenic non-protein coding RNA 1954, humanhuman

TSL 1 (best) BASIC

Gene LINC01954, Length 461 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01954-201ENST00000607419 PCDHB15Q9Y5E8 787 aa12.86□□□□□ -0.35
LINC01954-201ENST00000607419 A0A1B0GUL6 1792 aa12.86□□□□□ -0.35
LINC01954-201ENST00000607419 PSME4Q14997 1843 aa12.85□□□□□ -0.35
LINC01954-201ENST00000607419 HMMRO75330 724 aa12.85□□□□□ -0.35
LINC01954-201ENST00000607419 HABP4Q5JVS0 413 aaKnown RBP12.85□□□□□ -0.35
LINC01954-201ENST00000607419 RASAL3Q86YV0 1011 aa12.85□□□□□ -0.35
LINC01954-201ENST00000607419 SUPT20HQ8NEM7 779 aa12.85□□□□□ -0.35
LINC01954-201ENST00000607419 ZNF296Q8WUU4 475 aaPredicted RBP12.85□□□□□ -0.35
LINC01954-201ENST00000607419 DPF2Q92785 391 aa12.85□□□□□ -0.35
LINC01954-201ENST00000607419 DBNDD1Q9H9R9 158 aa12.85□□□□□ -0.35
LINC01954-201ENST00000607419 CHMP3Q9Y3E7 222 aa12.85□□□□□ -0.35
LINC01954-201ENST00000607419 RIMBP2O15034 1052 aa12.84□□□□□ -0.35
LINC01954-201ENST00000607419 SRGAP3O43295 1099 aa12.84□□□□□ -0.35
LINC01954-201ENST00000607419 BBOX1O75936 387 aa12.84□□□□□ -0.35
LINC01954-201ENST00000607419 CCDC57Q2TAC2 916 aa12.84□□□□□ -0.35
LINC01954-201ENST00000607419 SSH3Q8TE77 659 aa12.84□□□□□ -0.35
LINC01954-201ENST00000607419 PNMA6EA0A0J9YXQ4 647 aa12.83□□□□□ -0.36
LINC01954-201ENST00000607419 ANKRD18BA2A2Z9 1011 aa12.83□□□□□ -0.36
LINC01954-201ENST00000607419 IFIT5Q13325 482 aaKnown RBP12.83□□□□□ -0.36
LINC01954-201ENST00000607419 HDAC1Q13547 482 aaPredicted RBP12.83□□□□□ -0.36
LINC01954-201ENST00000607419 DOK7Q18PE1 504 aa12.83□□□□□ -0.36
LINC01954-201ENST00000607419 CHRDL2Q6WN34 429 aa12.83□□□□□ -0.36
LINC01954-201ENST00000607419 SIRT2Q8IXJ6 389 aa12.83□□□□□ -0.36
LINC01954-201ENST00000607419 GREM2Q9H772 168 aa12.83□□□□□ -0.36
LINC01954-201ENST00000607419 PPP4R2Q9NY27 417 aa12.83□□□□□ -0.36
LINC01954-201ENST00000607419 POLLQ9UGP5 575 aa12.83□□□□□ -0.36
LINC01954-201ENST00000607419 ZNF646O15015 1829 aaPredicted RBP12.83□□□□□ -0.36
LINC01954-201ENST00000607419 ITGA6P23229 1130 aa12.82□□□□□ -0.36
LINC01954-201ENST00000607419 DDX46Q7L014 1031 aaKnown RBP12.82□□□□□ -0.36
LINC01954-201ENST00000607419 DCPSQ96C86 337 aaKnown RBP12.82□□□□□ -0.36
LINC01954-201ENST00000607419 CDCA5Q96FF9 252 aa12.82□□□□□ -0.36
LINC01954-201ENST00000607419 CCDC85AQ96PX6 553 aaPredicted RBP12.82□□□□□ -0.36
LINC01954-201ENST00000607419 RWDD1Q9H446 243 aaPredicted RBP12.82□□□□□ -0.36
LINC01954-201ENST00000607419 POTEFA5A3E0 1075 aa12.81□□□□□ -0.36
LINC01954-201ENST00000607419 RFX5P48382 616 aaPredicted RBP12.81□□□□□ -0.36
LINC01954-201ENST00000607419 PRAMEF18Q5VWM3 479 aa12.81□□□□□ -0.36
LINC01954-201ENST00000607419 CELF1Q92879 486 aaKnown RBP12.81□□□□□ -0.36
LINC01954-201ENST00000607419 CDC5LQ99459 802 aaKnown RBP12.81□□□□□ -0.36
LINC01954-201ENST00000607419 COPRSQ9NQ92 184 aa12.81□□□□□ -0.36
LINC01954-201ENST00000607419 RBBP6Q7Z6E9 1792 aaKnown RBP12.81□□□□□ -0.36
LINC01954-201ENST00000607419 GPSM2P81274 684 aa12.8□□□□□ -0.36
LINC01954-201ENST00000607419 PTPN12Q05209 780 aaKnown RBP12.8□□□□□ -0.36
LINC01954-201ENST00000607419 GRAPQ13588 217 aa12.8□□□□□ -0.36
LINC01954-201ENST00000607419 WASHC4Q2M389 1173 aa12.8□□□□□ -0.36
LINC01954-201ENST00000607419 TAF7LQ5H9L4 462 aa12.8□□□□□ -0.36
LINC01954-201ENST00000607419 GRAPLQ8TC17 118 aaPredicted RBP12.8□□□□□ -0.36
LINC01954-201ENST00000607419 CCDC136Q96JN2 1154 aa12.8□□□□□ -0.36
LINC01954-201ENST00000607419 SEC31BQ9NQW1 1179 aa12.8□□□□□ -0.36
LINC01954-201ENST00000607419 GGA3Q9NZ52 723 aa12.8□□□□□ -0.36
LINC01954-201ENST00000607419 FBXO3Q9UK99 471 aa12.8□□□□□ -0.36
LINC01954-201ENST00000607419 GTF3C3Q9Y5Q9 886 aa12.8□□□□□ -0.36
LINC01954-201ENST00000607419 UBE2Q2LH0YL09 131 aa12.79□□□□□ -0.36
LINC01954-201ENST00000607419 GPR25O00155 361 aa12.79□□□□□ -0.36
LINC01954-201ENST00000607419 ECE2O60344 883 aa12.79□□□□□ -0.36
LINC01954-201ENST00000607419 IGHMBP2P38935 993 aaKnown RBP12.79□□□□□ -0.36
LINC01954-201ENST00000607419 FXR1P51114 621 aaKnown RBP eCLIP12.79□□□□□ -0.36
LINC01954-201ENST00000607419 KIF4BQ2VIQ3 1234 aa12.79□□□□□ -0.36
LINC01954-201ENST00000607419 HSP90AB4PQ58FF6 505 aa12.79□□□□□ -0.36
LINC01954-201ENST00000607419 ANKRD18AQ8IVF6 992 aa12.79□□□□□ -0.36
LINC01954-201ENST00000607419 TMX4Q9H1E5 349 aaPredicted RBP12.79□□□□□ -0.36
LINC01954-201ENST00000607419 DCTPP1Q9H773 170 aa12.79□□□□□ -0.36
LINC01954-201ENST00000607419 NOP58Q9Y2X3 529 aaKnown RBP12.79□□□□□ -0.36
LINC01954-201ENST00000607419 SURF6O75683 361 aaKnown RBP12.78□□□□□ -0.36
LINC01954-201ENST00000607419 CIAO1O76071 339 aa12.78□□□□□ -0.36
LINC01954-201ENST00000607419 IGHDP01880 384 aa12.78□□□□□ -0.36
LINC01954-201ENST00000607419 VIL1P09327 827 aaKnown RBP12.78□□□□□ -0.36
LINC01954-201ENST00000607419 TM4SF4P48230 202 aa12.78□□□□□ -0.36
LINC01954-201ENST00000607419 RPS8P62241 208 aaKnown RBP12.78□□□□□ -0.36
LINC01954-201ENST00000607419 G3BP1Q13283 466 aaKnown RBP eCLIP12.78□□□□□ -0.36
LINC01954-201ENST00000607419 SCARF1Q14162 830 aa12.78□□□□□ -0.36
LINC01954-201ENST00000607419 PKN2Q16513 984 aaKnown RBP12.78□□□□□ -0.36
LINC01954-201ENST00000607419 ANGEL2Q5VTE6 544 aaKnown RBP12.78□□□□□ -0.36
LINC01954-201ENST00000607419 KLHDC4Q8TBB5 520 aa12.78□□□□□ -0.36
LINC01954-201ENST00000607419 GCC1Q96CN9 775 aa12.78□□□□□ -0.36
LINC01954-201ENST00000607419 ZNF594Q96JF6 807 aaPredicted RBP12.78□□□□□ -0.36
LINC01954-201ENST00000607419 MPHOSPH8Q99549 860 aa12.78□□□□□ -0.36
LINC01954-201ENST00000607419 HDAC9Q9UKV0 1011 aa12.78□□□□□ -0.36
LINC01954-201ENST00000607419 NSFL1CQ9UNZ2 370 aaKnown RBP12.78□□□□□ -0.36
LINC01954-201ENST00000607419 PA2G4Q9UQ80 394 aaKnown RBP12.78□□□□□ -0.36
LINC01954-201ENST00000607419 EYA2O00167 538 aa12.77□□□□□ -0.37
LINC01954-201ENST00000607419 CAP1Q01518 475 aa12.77□□□□□ -0.37
LINC01954-201ENST00000607419 MKRN3Q13064 507 aaKnown RBP12.77□□□□□ -0.37
LINC01954-201ENST00000607419 FBXO46Q6PJ61 603 aaPredicted RBP12.77□□□□□ -0.37
LINC01954-201ENST00000607419 LDHAL6AQ6ZMR3 332 aa12.77□□□□□ -0.37
LINC01954-201ENST00000607419 TMC4Q7Z404 712 aa12.77□□□□□ -0.37
LINC01954-201ENST00000607419 MYH13Q9UKX3 1938 aa12.76□□□□□ -0.37
LINC01954-201ENST00000607419 WTIPA6NIX2 430 aaPredicted RBP12.76□□□□□ -0.37
LINC01954-201ENST00000607419 C6orf229H3BNL8 230 aa12.76□□□□□ -0.37
LINC01954-201ENST00000607419 RAB11FIP3O75154 756 aa12.76□□□□□ -0.37
LINC01954-201ENST00000607419 IL15P40933 162 aaPredicted RBP12.76□□□□□ -0.37
LINC01954-201ENST00000607419 B4GALNT3Q6L9W6 998 aa12.76□□□□□ -0.37
LINC01954-201ENST00000607419 ERC1Q8IUD2 1116 aa12.76□□□□□ -0.37
LINC01954-201ENST00000607419 SULF1Q8IWU6 871 aa12.76□□□□□ -0.37
LINC01954-201ENST00000607419 SMC5Q8IY18 1101 aa12.76□□□□□ -0.37
LINC01954-201ENST00000607419 SIL1Q9H173 461 aa12.76□□□□□ -0.37
LINC01954-201ENST00000607419 CNNM1Q9NRU3 951 aa12.76□□□□□ -0.37
LINC01954-201ENST00000607419 BSDC1Q9NW68 430 aaPredicted RBP12.76□□□□□ -0.37
LINC01954-201ENST00000607419 EXOC6BQ9Y2D4 811 aa12.76□□□□□ -0.37
LINC01954-201ENST00000607419 ARAP2Q8WZ64 1704 aa12.76□□□□□ -0.37
LINC01954-201ENST00000607419 LAMB1P07942 1786 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms