RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 NF2P35240 595 aa9.62□□□□□ -0.87
CUX1-219ENST00000606749 FKBP1AP62942 108 aaKnown RBP9.62□□□□□ -0.87
CUX1-219ENST00000606749 UBE4AQ14139 1066 aa9.62□□□□□ -0.87
CUX1-219ENST00000606749 DLGAP5Q15398 846 aa9.62□□□□□ -0.87
CUX1-219ENST00000606749 REM2Q8IYK8 340 aaPredicted RBP9.62□□□□□ -0.87
CUX1-219ENST00000606749 MTMR14Q8NCE2 650 aa9.62□□□□□ -0.87
CUX1-219ENST00000606749 SSH1Q8WYL5 1049 aa9.62□□□□□ -0.87
CUX1-219ENST00000606749 PTPRCP08575 1304 aa9.61□□□□□ -0.87
CUX1-219ENST00000606749 CASP8AP2Q9UKL3 1982 aa9.61□□□□□ -0.87
CUX1-219ENST00000606749 CCDC85CA6NKD9 419 aa9.61□□□□□ -0.87
CUX1-219ENST00000606749 F8W031 263 aaPredicted RBP9.61□□□□□ -0.87
CUX1-219ENST00000606749 TTLL12Q14166 644 aaPredicted RBP9.61□□□□□ -0.87
CUX1-219ENST00000606749 RABL6Q3YEC7 729 aaPredicted RBP9.61□□□□□ -0.87
CUX1-219ENST00000606749 APOBEC3FQ8IUX4 373 aaKnown RBP9.61□□□□□ -0.87
CUX1-219ENST00000606749 TDRD7Q8NHU6 1098 aaKnown RBP9.61□□□□□ -0.87
CUX1-219ENST00000606749 CDCA7LQ96GN5 454 aa9.61□□□□□ -0.87
CUX1-219ENST00000606749 PRMT6Q96LA8 375 aaPredicted RBP9.61□□□□□ -0.87
CUX1-219ENST00000606749 MCOLN1Q9GZU1 580 aa9.61□□□□□ -0.87
CUX1-219ENST00000606749 USP44Q9H0E7 712 aa9.61□□□□□ -0.87
CUX1-219ENST00000606749 DEFB129Q9H1M3 183 aa9.61□□□□□ -0.87
CUX1-219ENST00000606749 BICC1Q9H694 974 aaKnown RBP9.61□□□□□ -0.87
CUX1-219ENST00000606749 JAG2Q9Y219 1238 aa9.61□□□□□ -0.87
CUX1-219ENST00000606749 PCDHAC2Q9Y5I4 1007 aa9.61□□□□□ -0.87
CUX1-219ENST00000606749 HIBADHP31937 336 aaKnown RBP9.6□□□□□ -0.87
CUX1-219ENST00000606749 GYG1P46976 350 aa9.6□□□□□ -0.87
CUX1-219ENST00000606749 TM4SF4P48230 202 aa9.6□□□□□ -0.87
CUX1-219ENST00000606749 PTPN12Q05209 780 aaKnown RBP9.6□□□□□ -0.87
CUX1-219ENST00000606749 DGKZQ13574 1117 aa9.6□□□□□ -0.87
CUX1-219ENST00000606749 CFAP100Q494V2 611 aa9.6□□□□□ -0.87
CUX1-219ENST00000606749 LRRC24Q50LG9 513 aa9.6□□□□□ -0.87
CUX1-219ENST00000606749 LDLRAD1Q5T700 205 aa9.6□□□□□ -0.87
CUX1-219ENST00000606749 ARMC9Q7Z3E5 817 aa9.6□□□□□ -0.87
CUX1-219ENST00000606749 TRMT2AQ8IZ69 625 aaKnown RBP9.6□□□□□ -0.87
CUX1-219ENST00000606749 ANKRD44Q8N8A2 993 aa9.6□□□□□ -0.87
CUX1-219ENST00000606749 FAM84BQ96KN1 310 aaPredicted RBP9.6□□□□□ -0.87
CUX1-219ENST00000606749 PAPPA2Q9BXP8 1791 aa9.6□□□□□ -0.87
CUX1-219ENST00000606749 FAM205AQ6ZU69 1335 aa9.59□□□□□ -0.87
CUX1-219ENST00000606749 MROH5Q6ZUA9 1318 aa9.59□□□□□ -0.87
CUX1-219ENST00000606749 SPDYE2BA6NHP3 402 aa9.59□□□□□ -0.87
CUX1-219ENST00000606749 MYO1BO43795 1136 aa9.59□□□□□ -0.87
CUX1-219ENST00000606749 SPDYE6P0CI01 402 aa9.59□□□□□ -0.87
CUX1-219ENST00000606749 PRKG1Q13976 671 aa9.59□□□□□ -0.87
CUX1-219ENST00000606749 ALDH1L2Q3SY69 923 aa9.59□□□□□ -0.87
CUX1-219ENST00000606749 FBXO33Q7Z6M2 555 aa9.59□□□□□ -0.87
CUX1-219ENST00000606749 AOX1Q06278 1338 aa9.58□□□□□ -0.88
CUX1-219ENST00000606749 CLRN2A0PK11 232 aa9.58□□□□□ -0.88
CUX1-219ENST00000606749 PDE8BO95263 885 aa9.58□□□□□ -0.88
CUX1-219ENST00000606749 RGS19P49795 217 aa9.58□□□□□ -0.88
CUX1-219ENST00000606749 RBM5P52756 815 aaKnown RBP eCLIP9.58□□□□□ -0.88
CUX1-219ENST00000606749 MAP3K11Q16584 847 aa9.58□□□□□ -0.88
CUX1-219ENST00000606749 MFSD14BQ5SR56 506 aa9.58□□□□□ -0.88
CUX1-219ENST00000606749 ANGEL1Q9UNK9 670 aaKnown RBP9.58□□□□□ -0.88
CUX1-219ENST00000606749 FZD1Q9UP38 647 aa9.58□□□□□ -0.88
CUX1-219ENST00000606749 PPP2R3BQ9Y5P8 575 aa9.58□□□□□ -0.88
CUX1-219ENST00000606749 AKAP11Q9UKA4 1901 aa9.57□□□□□ -0.88
CUX1-219ENST00000606749 TBC1D8O95759 1140 aa9.57□□□□□ -0.88
CUX1-219ENST00000606749 MKRN3Q13064 507 aaKnown RBP9.57□□□□□ -0.88
CUX1-219ENST00000606749 SUPT20HL1Q3ZLR7 823 aa9.57□□□□□ -0.88
CUX1-219ENST00000606749 METTL24Q5JXM2 366 aa9.57□□□□□ -0.88
CUX1-219ENST00000606749 SPRYD7Q5W111 196 aa9.57□□□□□ -0.88
CUX1-219ENST00000606749 VPS37DQ86XT2 251 aa9.57□□□□□ -0.88
CUX1-219ENST00000606749 VGLL2Q8N8G2 317 aa9.57□□□□□ -0.88
CUX1-219ENST00000606749 KLHDC4Q8TBB5 520 aa9.57□□□□□ -0.88
CUX1-219ENST00000606749 SLC10A4Q96EP9 437 aa9.57□□□□□ -0.88
CUX1-219ENST00000606749 VEZTQ9HBM0 779 aa9.57□□□□□ -0.88
CUX1-219ENST00000606749 SERPINA10Q9UK55 444 aa9.57□□□□□ -0.88
CUX1-219ENST00000606749 TTF2Q9UNY4 1162 aaKnown RBP9.57□□□□□ -0.88
CUX1-219ENST00000606749 A0A1B0GUL6 1792 aa9.57□□□□□ -0.88
CUX1-219ENST00000606749 COL1A1P02452 1464 aaPredicted RBP9.56□□□□□ -0.88
CUX1-219ENST00000606749 PPP1R12BO60237 982 aaPredicted RBP9.56□□□□□ -0.88
CUX1-219ENST00000606749 USP2O75604 605 aaPredicted RBP9.56□□□□□ -0.88
CUX1-219ENST00000606749 RFX5P48382 616 aaPredicted RBP9.56□□□□□ -0.88
CUX1-219ENST00000606749 BCAMP50895 628 aa9.56□□□□□ -0.88
CUX1-219ENST00000606749 RASA3Q14644 834 aa9.56□□□□□ -0.88
CUX1-219ENST00000606749 GRIK5Q16478 980 aa9.56□□□□□ -0.88
CUX1-219ENST00000606749 CAVIN4Q5BKX8 364 aa9.56□□□□□ -0.88
CUX1-219ENST00000606749 NBPF12Q5TAG4 269 aaPredicted RBP9.56□□□□□ -0.88
CUX1-219ENST00000606749 DZIP1LQ8IYY4 767 aaKnown RBP9.56□□□□□ -0.88
CUX1-219ENST00000606749 TDRD3Q9H7E2 651 aaKnown RBP9.56□□□□□ -0.88
CUX1-219ENST00000606749 SMC4Q9NTJ3 1288 aa9.56□□□□□ -0.88
CUX1-219ENST00000606749 ZNF70Q9UC06 446 aaPredicted RBP9.56□□□□□ -0.88
CUX1-219ENST00000606749 NOB1Q9ULX3 412 aaKnown RBP9.56□□□□□ -0.88
CUX1-219ENST00000606749 IQSEC3Q9UPP2 1182 aaPredicted RBP9.56□□□□□ -0.88
CUX1-219ENST00000606749 UNCXA6NJT0 531 aa9.55□□□□□ -0.88
CUX1-219ENST00000606749 CCER2I3L3R5 266 aa9.55□□□□□ -0.88
CUX1-219ENST00000606749 FRAT2O75474 233 aaPredicted RBP9.55□□□□□ -0.88
CUX1-219ENST00000606749 CT47B1P0C2W7 299 aaPredicted RBP9.55□□□□□ -0.88
CUX1-219ENST00000606749 FGFR2P21802 821 aa9.55□□□□□ -0.88
CUX1-219ENST00000606749 CRKP46108 304 aa9.55□□□□□ -0.88
CUX1-219ENST00000606749 SREBF2Q12772 1141 aa9.55□□□□□ -0.88
CUX1-219ENST00000606749 SPDYE2Q495Y8 402 aa9.55□□□□□ -0.88
CUX1-219ENST00000606749 CTU1Q7Z7A3 348 aaKnown RBP9.55□□□□□ -0.88
CUX1-219ENST00000606749 CLMNQ96JQ2 1002 aa9.55□□□□□ -0.88
CUX1-219ENST00000606749 MRIQ9BWK5 157 aa9.55□□□□□ -0.88
CUX1-219ENST00000606749 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.55□□□□□ -0.88
CUX1-219ENST00000606749 GPR25O00155 361 aa9.54□□□□□ -0.88
CUX1-219ENST00000606749 EYA2O00167 538 aa9.54□□□□□ -0.88
CUX1-219ENST00000606749 IFIT1P09914 478 aaKnown RBP9.54□□□□□ -0.88
CUX1-219ENST00000606749 INHBEP58166 350 aa9.54□□□□□ -0.88
CUX1-219ENST00000606749 HDLBPQ00341 1268 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms