RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 NBPF12Q5TAG4 269 aaPredicted RBP19.8■□□□□ 0.76
NEDD8-MDP1-204ENST00000605847 MTMR14Q8NCE2 650 aa19.8■□□□□ 0.76
NEDD8-MDP1-204ENST00000605847 CHMP4AQ9BY43 222 aa19.8■□□□□ 0.76
NEDD8-MDP1-204ENST00000605847 ZFYVE28Q9HCC9 887 aa19.8■□□□□ 0.76
NEDD8-MDP1-204ENST00000605847 USP2O75604 605 aaPredicted RBP19.79■□□□□ 0.76
NEDD8-MDP1-204ENST00000605847 RBM5P52756 815 aaKnown RBP eCLIP19.79■□□□□ 0.76
NEDD8-MDP1-204ENST00000605847 WDR43Q15061 677 aaKnown RBP eCLIP19.79■□□□□ 0.76
NEDD8-MDP1-204ENST00000605847 RALBP1Q15311 655 aa19.79■□□□□ 0.76
NEDD8-MDP1-204ENST00000605847 TAF1CQ15572 869 aaPredicted RBP19.79■□□□□ 0.76
NEDD8-MDP1-204ENST00000605847 CFAP100Q494V2 611 aa19.79■□□□□ 0.76
NEDD8-MDP1-204ENST00000605847 OPTNQ96CV9 577 aa19.79■□□□□ 0.76
NEDD8-MDP1-204ENST00000605847 ELP3Q9H9T3 547 aa19.79■□□□□ 0.76
NEDD8-MDP1-204ENST00000605847 CD209Q9NNX6 404 aa19.79■□□□□ 0.76
NEDD8-MDP1-204ENST00000605847 SPEF2Q9C093 1822 aa19.79■□□□□ 0.76
NEDD8-MDP1-204ENST00000605847 WDHD1O75717 1129 aaPredicted RBP19.78■□□□□ 0.76
NEDD8-MDP1-204ENST00000605847 CHRDL2Q6WN34 429 aa19.78■□□□□ 0.76
NEDD8-MDP1-204ENST00000605847 OTUD5Q96G74 571 aa19.78■□□□□ 0.76
NEDD8-MDP1-204ENST00000605847 SPDYE2BA6NHP3 402 aa19.77■□□□□ 0.76
NEDD8-MDP1-204ENST00000605847 SPDYE6P0CI01 402 aa19.77■□□□□ 0.76
NEDD8-MDP1-204ENST00000605847 CAP1Q01518 475 aa19.77■□□□□ 0.76
NEDD8-MDP1-204ENST00000605847 KIF22Q14807 665 aa19.77■□□□□ 0.76
NEDD8-MDP1-204ENST00000605847 CCDC30Q5VVM6 783 aa19.77■□□□□ 0.76
NEDD8-MDP1-204ENST00000605847 PCDHAC2Q9Y5I4 1007 aa19.77■□□□□ 0.76
NEDD8-MDP1-204ENST00000605847 LAMB1P07942 1786 aa19.77■□□□□ 0.76
NEDD8-MDP1-204ENST00000605847 ITGA6P23229 1130 aa19.76■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 TNFAIP1Q13829 316 aa19.76■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 RASA3Q14644 834 aa19.76■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 CERS5Q8N5B7 392 aa19.76■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 PRMT6Q96LA8 375 aaPredicted RBP19.76■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 CCL15-CCL14A0A0B4J2E2 113 aa19.75■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 PI4KAP2A4QPH2 592 aa19.75■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 DLL1O00548 723 aa19.75■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 IGKV5-2P06315 115 aa19.75■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 GTF2A2P52657 109 aa19.75■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 GNAI1P63096 354 aa19.75■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 CHRNDQ07001 517 aa19.75■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 CCL15Q16663 113 aa19.75■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 KSR2Q6VAB6 950 aa19.75■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 UBE3BQ7Z3V4 1068 aa19.75■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 PI4KAP1Q8N8J0 262 aa19.75■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 DPF3Q92784 378 aa19.75■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 KIAA0100Q14667 2235 aaKnown RBP19.74■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 CALD1Q05682 793 aaKnown RBP19.74■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 CWF19L2Q2TBE0 894 aaKnown RBP19.74■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 ZNF804AQ7Z570 1209 aa19.74■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 SLC17A8Q8NDX2 589 aa19.74■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 SH3TC2Q8TF17 1288 aa19.74■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 MS4A4AQ96JQ5 239 aa19.74■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 IFT57Q9NWB7 429 aa19.74■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 ZNF853P0CG23 659 aa19.73■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 BRI3BPQ8WY22 251 aa19.73■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 FKBP1AP62942 108 aaKnown RBP19.72■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 RBM27Q9P2N5 1060 aaKnown RBP19.72■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 CSADQ9Y600 493 aa19.72■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 MYH3P11055 1940 aa19.72■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 ECM29Q5VYK3 1845 aa19.72■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 NEURL1BA8MQ27 555 aa19.71■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 C8orf58Q8NAV2 365 aa19.71■□□□□ 0.75
NEDD8-MDP1-204ENST00000605847 H7C1W4 665 aa19.7■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 TAF5LO75529 589 aa19.7■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 GNRH1P01148 92 aa19.7■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 FAM43AQ8N2R8 423 aa19.7■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 CNKSR2Q8WXI2 1034 aa19.7■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 STK31Q9BXU1 1019 aa19.7■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 ADAMTS8Q9UP79 889 aa19.7■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 JAG2Q9Y219 1238 aa19.7■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 ANKRD18BA2A2Z9 1011 aa19.69■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 SNAP23O00161 211 aa19.69■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 TLR2O60603 784 aa19.69■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 IL1R1P14778 569 aa19.69■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 PRMT2P55345 433 aa19.69■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 MAP3K9P80192 1104 aa19.69■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 VGLL4Q14135 290 aa19.69■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.69■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 C15orf52Q6ZUT6 534 aaKnown RBP19.69■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 NKX2-3Q8TAU0 364 aa19.69■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 PLA2G12BQ9BX93 195 aa19.69■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 MYBBP1AQ9BQG0 1328 aaKnown RBP19.69■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 TNNI2P48788 182 aa19.68■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 LACTBP83111 547 aaPredicted RBP19.68■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 HELBQ8NG08 1087 aaPredicted RBP19.68■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 HTATIP2Q9BUP3 242 aa19.68■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 ARHGAP39Q9C0H5 1083 aa19.68■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 ZNF70Q9UC06 446 aaPredicted RBP19.68■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 AOX1Q06278 1338 aa19.68■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 SPDYE2Q495Y8 402 aa19.67■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 TDRD3Q9H7E2 651 aaKnown RBP19.67■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 TCP10L2B9ZVM9 353 aa19.66■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 ECM2O94769 699 aaPredicted RBP19.66■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 CSF1RP07333 972 aa19.66■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 CETPP11597 493 aa19.66■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 GCKRQ14397 625 aa19.66■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 MYH16Q9H6N6 1097 aa19.66■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 NR2E3Q9Y5X4 410 aa19.66■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 SZT2Q5T011 3432 aa19.65■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 OTOFQ9HC10 1997 aa19.65■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 MTFR1Q15390 333 aa19.65■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.65■□□□□ 0.743e-11■■□□□ 12.5
NEDD8-MDP1-204ENST00000605847 TMEM39BQ9GZU3 492 aa19.65■□□□□ 0.74
NEDD8-MDP1-204ENST00000605847 ZCCHC17Q9NP64 241 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms