RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 ZPR1O75312 459 aa17.86■□□□□ 0.45
CCDC12-211ENST00000604367 MRE11P49959 708 aa17.86■□□□□ 0.45
CCDC12-211ENST00000604367 IMMTQ16891 758 aaKnown RBP17.86■□□□□ 0.45
CCDC12-211ENST00000604367 ZSCAN23Q3MJ62 389 aa17.86■□□□□ 0.45
CCDC12-211ENST00000604367 NARFQ9UHQ1 456 aa17.86■□□□□ 0.45
CCDC12-211ENST00000604367 CTNNA3Q9UI47 895 aa17.86■□□□□ 0.45
CCDC12-211ENST00000604367 THSD7AQ9UPZ6 1657 aa17.85■□□□□ 0.45
CCDC12-211ENST00000604367 RTL9Q8NET4 1388 aa17.85■□□□□ 0.45
CCDC12-211ENST00000604367 JAK2O60674 1132 aa17.85■□□□□ 0.45
CCDC12-211ENST00000604367 GADD45BO75293 160 aaPredicted RBP17.85■□□□□ 0.45
CCDC12-211ENST00000604367 NAP1L2Q9ULW6 460 aaPredicted RBP17.85■□□□□ 0.45
CCDC12-211ENST00000604367 RTCBQ9Y3I0 505 aaKnown RBP17.85■□□□□ 0.45
CCDC12-211ENST00000604367 PDE6AP16499 860 aa17.84■□□□□ 0.45
CCDC12-211ENST00000604367 EXOSC10Q01780 885 aaKnown RBP17.84■□□□□ 0.45
CCDC12-211ENST00000604367 APOBRQ0VD83 1088 aa17.84■□□□□ 0.45
CCDC12-211ENST00000604367 RC3H1Q5TC82 1133 aaKnown RBP17.84■□□□□ 0.45
CCDC12-211ENST00000604367 ANKRD18AQ8IVF6 992 aa17.84■□□□□ 0.45
CCDC12-211ENST00000604367 SETDB2Q96T68 719 aa17.84■□□□□ 0.45
CCDC12-211ENST00000604367 TAF1P21675 1872 aa17.84■□□□□ 0.45
CCDC12-211ENST00000604367 PHF14O94880 888 aa17.84■□□□□ 0.45
CCDC12-211ENST00000604367 APPP05067 770 aa17.84■□□□□ 0.45
CCDC12-211ENST00000604367 UBE3CQ15386 1083 aa17.84■□□□□ 0.45
CCDC12-211ENST00000604367 FERMT3Q86UX7 667 aa17.84■□□□□ 0.45
CCDC12-211ENST00000604367 TMEM63CQ9P1W3 806 aa17.84■□□□□ 0.45
CCDC12-211ENST00000604367 IQSEC3Q9UPP2 1182 aaPredicted RBP17.84■□□□□ 0.45
CCDC12-211ENST00000604367 WTIPA6NIX2 430 aaPredicted RBP17.83■□□□□ 0.45
CCDC12-211ENST00000604367 FIBPO43427 364 aa17.83■□□□□ 0.45
CCDC12-211ENST00000604367 SCRN1Q12765 414 aa17.83■□□□□ 0.45
CCDC12-211ENST00000604367 CDC37L1Q7L3B6 337 aa17.83■□□□□ 0.45
CCDC12-211ENST00000604367 ATP6V1DQ9Y5K8 247 aa17.83■□□□□ 0.45
CCDC12-211ENST00000604367 LAMB2P55268 1798 aa17.83■□□□□ 0.45
CCDC12-211ENST00000604367 MBD3O95983 291 aa17.83■□□□□ 0.44
CCDC12-211ENST00000604367 DNM1Q05193 864 aaKnown RBP17.83■□□□□ 0.44
CCDC12-211ENST00000604367 SF3B3Q15393 1217 aaKnown RBP17.83■□□□□ 0.44
CCDC12-211ENST00000604367 NBPF5PQ86XG9 351 aaPredicted RBP17.83■□□□□ 0.44
CCDC12-211ENST00000604367 SEPT12Q8IYM1 358 aa17.83■□□□□ 0.44
CCDC12-211ENST00000604367 MAGEB6Q8N7X4 407 aa17.83■□□□□ 0.44
CCDC12-211ENST00000604367 DDX11Q96FC9 970 aa17.83■□□□□ 0.44
CCDC12-211ENST00000604367 ISY1Q9ULR0 285 aaKnown RBP17.83■□□□□ 0.44
CCDC12-211ENST00000604367 NHSQ6T4R5 1651 aa17.83■□□□□ 0.44
CCDC12-211ENST00000604367 ZNF213O14771 459 aa17.82■□□□□ 0.44
CCDC12-211ENST00000604367 UBE2Q2Q8WVN8 375 aa17.82■□□□□ 0.44
CCDC12-211ENST00000604367 CELF1Q92879 486 aaKnown RBP17.82■□□□□ 0.44
CCDC12-211ENST00000604367 ARHGEF1Q92888 912 aaKnown RBP17.82■□□□□ 0.44
CCDC12-211ENST00000604367 PDCP20941 246 aa17.82■□□□□ 0.44
CCDC12-211ENST00000604367 ARAP2Q8WZ64 1704 aa17.82■□□□□ 0.44
CCDC12-211ENST00000604367 TCRBV5S4A2TA0A5A2 114 aa17.81■□□□□ 0.44
CCDC12-211ENST00000604367 CCT2P78371 535 aaKnown RBP17.81■□□□□ 0.44
CCDC12-211ENST00000604367 MAP3K12Q12852 859 aa17.81■□□□□ 0.44
CCDC12-211ENST00000604367 AIDAQ96BJ3 306 aa17.81■□□□□ 0.44
CCDC12-211ENST00000604367 GPHNQ9NQX3 736 aaPredicted RBP17.81■□□□□ 0.44
CCDC12-211ENST00000604367 PPFIA3O75145 1194 aa17.8■□□□□ 0.44
CCDC12-211ENST00000604367 GYG1P46976 350 aa17.8■□□□□ 0.44
CCDC12-211ENST00000604367 ZNF445P59923 1031 aa17.8■□□□□ 0.44
CCDC12-211ENST00000604367 TRPC5Q9UL62 973 aaPredicted RBP17.8■□□□□ 0.44
CCDC12-211ENST00000604367 SCN7AQ01118 1682 aa17.8■□□□□ 0.44
CCDC12-211ENST00000604367 SYCE3A1L190 88 aa17.8■□□□□ 0.44
CCDC12-211ENST00000604367 NPHP1O15259 732 aa17.8■□□□□ 0.44
CCDC12-211ENST00000604367 PFKFB2O60825 505 aa17.8■□□□□ 0.44
CCDC12-211ENST00000604367 FAM173BQ6P4H8 233 aa17.8■□□□□ 0.44
CCDC12-211ENST00000604367 NLRP3Q96P20 1036 aa17.8■□□□□ 0.44
CCDC12-211ENST00000604367 AGXT2Q9BYV1 514 aa17.8■□□□□ 0.44
CCDC12-211ENST00000604367 NYXQ9GZU5 481 aa17.8■□□□□ 0.44
CCDC12-211ENST00000604367 NCOA5Q9HCD5 579 aaKnown RBP17.8■□□□□ 0.44
CCDC12-211ENST00000604367 BSDC1Q9NW68 430 aaPredicted RBP17.8■□□□□ 0.44
CCDC12-211ENST00000604367 SLC10A5Q5PT55 438 aa17.79■□□□□ 0.44
CCDC12-211ENST00000604367 RALYLQ86SE5 291 aaKnown RBP17.79■□□□□ 0.44
CCDC12-211ENST00000604367 MINPP1Q9UNW1 487 aa17.79■□□□□ 0.44
CCDC12-211ENST00000604367 ATRNO75882 1429 aa17.79■□□□□ 0.44
CCDC12-211ENST00000604367 RFC4P35249 363 aa17.79■□□□□ 0.44
CCDC12-211ENST00000604367 TPTE2Q6XPS3 522 aa17.79■□□□□ 0.44
CCDC12-211ENST00000604367 DENND2AQ9ULE3 1009 aa17.79■□□□□ 0.44
CCDC12-211ENST00000604367 FAM196AQ6ZSG2 479 aa17.78■□□□□ 0.44
CCDC12-211ENST00000604367 FAM184AQ8NB25 1140 aa17.78■□□□□ 0.44
CCDC12-211ENST00000604367 TMEM87AQ8NBN3 555 aa17.78■□□□□ 0.44
CCDC12-211ENST00000604367 NCOA7Q8NI08 942 aa17.78■□□□□ 0.44
CCDC12-211ENST00000604367 STRBPQ96SI9 672 aaKnown RBP17.78■□□□□ 0.44
CCDC12-211ENST00000604367 ARMT1Q9H993 441 aa17.78■□□□□ 0.44
CCDC12-211ENST00000604367 LRP2BPQ9P2M1 347 aa17.78■□□□□ 0.44
CCDC12-211ENST00000604367 PRC1O43663 620 aa17.78■□□□□ 0.44
CCDC12-211ENST00000604367 MBD4O95243 580 aa17.78■□□□□ 0.44
CCDC12-211ENST00000604367 PDIA3P30101 505 aaKnown RBP17.78■□□□□ 0.44
CCDC12-211ENST00000604367 NBPF3Q9H094 633 aa17.78■□□□□ 0.44
CCDC12-211ENST00000604367 ABCF2Q9UG63 623 aa17.78■□□□□ 0.44
CCDC12-211ENST00000604367 ONECUT3O60422 494 aaPredicted RBP17.77■□□□□ 0.44
CCDC12-211ENST00000604367 MCM5P33992 734 aa17.77■□□□□ 0.44
CCDC12-211ENST00000604367 FOSBP53539 338 aa17.77■□□□□ 0.44
CCDC12-211ENST00000604367 TRAPPC3LQ5T215 181 aa17.77■□□□□ 0.44
CCDC12-211ENST00000604367 MB21D2Q8IYB1 491 aaPredicted RBP17.77■□□□□ 0.44
CCDC12-211ENST00000604367 CASZ1Q86V15 1759 aa17.77■□□□□ 0.44
CCDC12-211ENST00000604367 RGL2O15211 777 aa17.77■□□□□ 0.43
CCDC12-211ENST00000604367 CTDNEP1O95476 244 aa17.77■□□□□ 0.43
CCDC12-211ENST00000604367 VPS37DQ86XT2 251 aa17.77■□□□□ 0.43
CCDC12-211ENST00000604367 TBC1D10CQ8IV04 446 aa17.77■□□□□ 0.43
CCDC12-211ENST00000604367 NSUN7Q8NE18 718 aaKnown RBP17.77■□□□□ 0.43
CCDC12-211ENST00000604367 QTRT2Q9H974 415 aaKnown RBP17.77■□□□□ 0.43
CCDC12-211ENST00000604367 LRRC4BQ9NT99 713 aa17.77■□□□□ 0.43
CCDC12-211ENST00000604367 PDIA4P13667 645 aaKnown RBP17.76■□□□□ 0.43
CCDC12-211ENST00000604367 RPS8P62241 208 aaKnown RBP17.76■□□□□ 0.43
CCDC12-211ENST00000604367 MIGA1Q8NAN2 632 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms