RNA–Protein interactions for RNA: ENST00000603844.1

FOCAD-210, Transcript of focadhesin, humanhuman

TSL 3

Gene FOCAD, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-210ENST00000603844 NUDT16Q96DE0 195 aaKnown RBP8.41□□□□□ -1.06
FOCAD-210ENST00000603844 PIM2Q9P1W9 311 aa8.41□□□□□ -1.06
FOCAD-210ENST00000603844 CNTN3Q9P232 1028 aa8.41□□□□□ -1.06
FOCAD-210ENST00000603844 GAS2O43903 313 aaKnown RBP8.4□□□□□ -1.06
FOCAD-210ENST00000603844 HOXA10P31260 410 aaPredicted RBP8.4□□□□□ -1.06
FOCAD-210ENST00000603844 GIMAP7Q8NHV1 300 aa8.4□□□□□ -1.06
FOCAD-210ENST00000603844 MFSD14AQ96MC6 490 aa8.4□□□□□ -1.06
FOCAD-210ENST00000603844 DZANK1Q9NVP4 752 aa8.4□□□□□ -1.06
FOCAD-210ENST00000603844 PDE2AO00408 941 aaPredicted RBP8.39□□□□□ -1.07
FOCAD-210ENST00000603844 RPLP1P05386 114 aaKnown RBP8.39□□□□□ -1.07
FOCAD-210ENST00000603844 MAP4P27816 1152 aaKnown RBP8.39□□□□□ -1.07
FOCAD-210ENST00000603844 ARL4DP49703 201 aa8.39□□□□□ -1.07
FOCAD-210ENST00000603844 SRPK2P78362 688 aaKnown RBP8.39□□□□□ -1.07
FOCAD-210ENST00000603844 XKR5Q6UX68 686 aa8.39□□□□□ -1.07
FOCAD-210ENST00000603844 SLC7A3Q8WY07 619 aa8.39□□□□□ -1.07
FOCAD-210ENST00000603844 SOX13Q9UN79 622 aa8.39□□□□□ -1.07
FOCAD-210ENST00000603844 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.39□□□□□ -1.07
FOCAD-210ENST00000603844 ACPPP15309 386 aa8.38□□□□□ -1.07
FOCAD-210ENST00000603844 C19orf57Q0VDD7 668 aa8.38□□□□□ -1.07
FOCAD-210ENST00000603844 FZD5Q13467 585 aa8.38□□□□□ -1.07
FOCAD-210ENST00000603844 CLP1Q92989 425 aaKnown RBP8.38□□□□□ -1.07
FOCAD-210ENST00000603844 ATG3Q9NT62 314 aa8.38□□□□□ -1.07
FOCAD-210ENST00000603844 ATG7O95352 703 aa8.37□□□□□ -1.07
FOCAD-210ENST00000603844 CES1P23141 567 aa8.37□□□□□ -1.07
FOCAD-210ENST00000603844 CPSF6Q16630 551 aaKnown RBP eCLIP8.37□□□□□ -1.07
FOCAD-210ENST00000603844 SGO2Q562F6 1265 aa8.37□□□□□ -1.07
FOCAD-210ENST00000603844 TMEM164Q5U3C3 297 aa8.37□□□□□ -1.07
FOCAD-210ENST00000603844 ABI1Q8IZP0 508 aa8.37□□□□□ -1.07
FOCAD-210ENST00000603844 C1orf127Q8N9H9 656 aa8.37□□□□□ -1.07
FOCAD-210ENST00000603844 LEMD3Q9Y2U8 911 aa8.37□□□□□ -1.07
FOCAD-210ENST00000603844 ARID1BQ8NFD5 2236 aaPredicted RBP8.36□□□□□ -1.07
FOCAD-210ENST00000603844 F13BP05160 661 aa8.36□□□□□ -1.07
FOCAD-210ENST00000603844 MSMPQ1L6U9 139 aa8.36□□□□□ -1.07
FOCAD-210ENST00000603844 HGSNATQ68CP4 663 aa8.36□□□□□ -1.07
FOCAD-210ENST00000603844 ATCAYQ86WG3 371 aa8.36□□□□□ -1.07
FOCAD-210ENST00000603844 HHIPQ96QV1 700 aa8.36□□□□□ -1.07
FOCAD-210ENST00000603844 TMPRSS13Q9BYE2 586 aa8.36□□□□□ -1.07
FOCAD-210ENST00000603844 TRPA1O75762 1119 aa8.35□□□□□ -1.07
FOCAD-210ENST00000603844 FOSL1P15407 271 aa8.35□□□□□ -1.07
FOCAD-210ENST00000603844 NUTM2GQ5VZR2 741 aa8.35□□□□□ -1.07
FOCAD-210ENST00000603844 TMEM102Q8N9M5 508 aaPredicted RBP8.35□□□□□ -1.07
FOCAD-210ENST00000603844 SMG8Q8ND04 991 aaKnown RBP8.35□□□□□ -1.07
FOCAD-210ENST00000603844 SUGCTQ9HAC7 445 aa8.35□□□□□ -1.07
FOCAD-210ENST00000603844 ANGEL1Q9UNK9 670 aaKnown RBP8.35□□□□□ -1.07
FOCAD-210ENST00000603844 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.34□□□□□ -1.07
FOCAD-210ENST00000603844 TIAF1O95411 115 aa8.34□□□□□ -1.07
FOCAD-210ENST00000603844 PRNPP04156 253 aa8.34□□□□□ -1.07
FOCAD-210ENST00000603844 RXRBP28702 533 aa8.34□□□□□ -1.07
FOCAD-210ENST00000603844 FBXL6Q8N531 539 aa8.34□□□□□ -1.07
FOCAD-210ENST00000603844 C12orf50Q8NA57 414 aaPredicted RBP8.34□□□□□ -1.07
FOCAD-210ENST00000603844 EDEM1Q92611 657 aa8.34□□□□□ -1.07
FOCAD-210ENST00000603844 PMEPA1Q969W9 287 aa8.34□□□□□ -1.07
FOCAD-210ENST00000603844 OSBPL1AQ9BXW6 950 aa8.34□□□□□ -1.07
FOCAD-210ENST00000603844 CYP4F12Q9HCS2 524 aa8.34□□□□□ -1.07
FOCAD-210ENST00000603844 SOX1O00570 391 aaPredicted RBP8.33□□□□□ -1.08
FOCAD-210ENST00000603844 PCSK2P16519 638 aa8.33□□□□□ -1.08
FOCAD-210ENST00000603844 IKBKEQ14164 716 aa8.33□□□□□ -1.08
FOCAD-210ENST00000603844 LCE1DQ5T752 114 aa8.33□□□□□ -1.08
FOCAD-210ENST00000603844 BSNDQ8WZ55 320 aa8.33□□□□□ -1.08
FOCAD-210ENST00000603844 NXPE3Q969Y0 559 aa8.33□□□□□ -1.08
FOCAD-210ENST00000603844 CHRDQ9H2X0 955 aa8.33□□□□□ -1.08
FOCAD-210ENST00000603844 CCDC39Q9UFE4 941 aa8.33□□□□□ -1.08
FOCAD-210ENST00000603844 SEPT3Q9UH03 358 aa8.33□□□□□ -1.08
FOCAD-210ENST00000603844 FAM95CA0A1B0GW59 222 aa8.32□□□□□ -1.08
FOCAD-210ENST00000603844 CBLL1Q75N03 491 aa8.32□□□□□ -1.08
FOCAD-210ENST00000603844 VN1R5Q7Z5H4 357 aa8.32□□□□□ -1.08
FOCAD-210ENST00000603844 FBXL18Q96ME1 805 aa8.32□□□□□ -1.08
FOCAD-210ENST00000603844 GGNBP2Q9H3C7 697 aa8.32□□□□□ -1.08
FOCAD-210ENST00000603844 SLAIN2Q9P270 581 aa8.32□□□□□ -1.08
FOCAD-210ENST00000603844 CFTRP13569 1480 aa8.32□□□□□ -1.08
FOCAD-210ENST00000603844 LOC100289279A0A1B0GTE1 492 aa8.31□□□□□ -1.08
FOCAD-210ENST00000603844 PDGFAP04085 211 aa8.31□□□□□ -1.08
FOCAD-210ENST00000603844 DNM1Q05193 864 aaKnown RBP8.31□□□□□ -1.08
FOCAD-210ENST00000603844 PAOXQ6QHF9 649 aa8.31□□□□□ -1.08
FOCAD-210ENST00000603844 OSMRQ99650 979 aa8.31□□□□□ -1.08
FOCAD-210ENST00000603844 METTL22Q9BUU2 404 aaPredicted RBP8.31□□□□□ -1.08
FOCAD-210ENST00000603844 USP26Q9BXU7 913 aa8.31□□□□□ -1.08
FOCAD-210ENST00000603844 SOX17Q9H6I2 414 aaPredicted RBP8.31□□□□□ -1.08
FOCAD-210ENST00000603844 CADPSQ9ULU8 1353 aa8.31□□□□□ -1.08
FOCAD-210ENST00000603844 ATP2B4P23634 1241 aa8.3□□□□□ -1.08
FOCAD-210ENST00000603844 NFKBIBQ15653 356 aa8.3□□□□□ -1.08
FOCAD-210ENST00000603844 C8orf34Q49A92 452 aa8.3□□□□□ -1.08
FOCAD-210ENST00000603844 NFXL1Q6ZNB6 911 aa8.3□□□□□ -1.08
FOCAD-210ENST00000603844 VSIG10LQ86VR7 867 aa8.3□□□□□ -1.08
FOCAD-210ENST00000603844 SHISA5Q8N114 240 aa8.3□□□□□ -1.08
FOCAD-210ENST00000603844 TTC16Q8NEE8 873 aa8.3□□□□□ -1.08
FOCAD-210ENST00000603844 HELQQ8TDG4 1101 aa8.3□□□□□ -1.08
FOCAD-210ENST00000603844 ZKSCAN3Q9BRR0 538 aa8.3□□□□□ -1.08
FOCAD-210ENST00000603844 PRDM2Q13029 1718 aa8.29□□□□□ -1.08
FOCAD-210ENST00000603844 A6NHS1 94 aa8.29□□□□□ -1.08
FOCAD-210ENST00000603844 DLGAP3O95886 979 aa8.29□□□□□ -1.08
FOCAD-210ENST00000603844 MZF1P28698 734 aaPredicted RBP8.29□□□□□ -1.08
FOCAD-210ENST00000603844 USP11P51784 963 aa8.29□□□□□ -1.08
FOCAD-210ENST00000603844 NOM1Q5C9Z4 860 aaKnown RBP8.29□□□□□ -1.08
FOCAD-210ENST00000603844 EXOSC6Q5RKV6 272 aaKnown RBP8.29□□□□□ -1.08
FOCAD-210ENST00000603844 KRTAP4-7Q9BYR0 210 aa8.29□□□□□ -1.08
FOCAD-210ENST00000603844 ABCC8Q09428 1581 aa8.28□□□□□ -1.08
FOCAD-210ENST00000603844 OGFOD2Q6N063 350 aa8.28□□□□□ -1.08
FOCAD-210ENST00000603844 CDPF1Q6NVV7 123 aa8.28□□□□□ -1.08
FOCAD-210ENST00000603844 FBLIM1Q8WUP2 373 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms