RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 MRGBPQ9NV56 204 aa5.53□□□□□ -1.52
LINC01109-201ENST00000603837 ZNF446Q9NWS9 450 aa5.53□□□□□ -1.52
LINC01109-201ENST00000603837 MKS1Q9NXB0 559 aa5.53□□□□□ -1.52
LINC01109-201ENST00000603837 RABL2AQ9UBK7 228 aaPredicted RBP5.53□□□□□ -1.52
LINC01109-201ENST00000603837 THRAP3Q9Y2W1 955 aaKnown RBP5.53□□□□□ -1.52
LINC01109-201ENST00000603837 FCF1Q9Y324 198 aaKnown RBP5.53□□□□□ -1.52
LINC01109-201ENST00000603837 TRIM64CA6NLI5 447 aa5.53□□□□□ -1.52
LINC01109-201ENST00000603837 MAP2K2P36507 400 aa5.53□□□□□ -1.52
LINC01109-201ENST00000603837 RASSF7Q02833 373 aa5.53□□□□□ -1.52
LINC01109-201ENST00000603837 TRDNQ13061 729 aa5.53□□□□□ -1.52
LINC01109-201ENST00000603837 C11orf91Q3C1V1 193 aa5.53□□□□□ -1.52
LINC01109-201ENST00000603837 CCAR1Q8IX12 1150 aaKnown RBP5.53□□□□□ -1.52
LINC01109-201ENST00000603837 ANKRD20A12PQ8NF67 263 aa5.53□□□□□ -1.52
LINC01109-201ENST00000603837 ASXL2Q76L83 1435 aa5.52□□□□□ -1.53
LINC01109-201ENST00000603837 KCNA2P16389 499 aa5.52□□□□□ -1.53
LINC01109-201ENST00000603837 CTDSPL2Q05D32 466 aa5.52□□□□□ -1.53
LINC01109-201ENST00000603837 CCDC15Q0P6D6 951 aa5.52□□□□□ -1.53
LINC01109-201ENST00000603837 WAPLQ7Z5K2 1190 aa5.52□□□□□ -1.53
LINC01109-201ENST00000603837 TXLNBQ8N3L3 684 aa5.52□□□□□ -1.53
LINC01109-201ENST00000603837 CCDC24Q8N4L8 307 aa5.52□□□□□ -1.53
LINC01109-201ENST00000603837 ANKLE1Q8NAG6 615 aa5.52□□□□□ -1.53
LINC01109-201ENST00000603837 CFAP53Q96M91 514 aa5.52□□□□□ -1.53
LINC01109-201ENST00000603837 CEP63Q96MT8 703 aa5.52□□□□□ -1.53
LINC01109-201ENST00000603837 NUDT12Q9BQG2 462 aa5.52□□□□□ -1.53
LINC01109-201ENST00000603837 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.52□□□□□ -1.53
LINC01109-201ENST00000603837 MAPK8IP3Q9UPT6 1336 aa5.52□□□□□ -1.53
LINC01109-201ENST00000603837 KDM5CP41229 1560 aa5.52□□□□□ -1.53
LINC01109-201ENST00000603837 ADGRL1O94910 1474 aa5.52□□□□□ -1.53
LINC01109-201ENST00000603837 CDC42BPAQ5VT25 1732 aa5.52□□□□□ -1.53
LINC01109-201ENST00000603837 IBSPP21815 317 aaPredicted RBP5.52□□□□□ -1.53
LINC01109-201ENST00000603837 RAB3GAP1Q15042 981 aa5.52□□□□□ -1.53
LINC01109-201ENST00000603837 ZSCAN23Q3MJ62 389 aa5.52□□□□□ -1.53
LINC01109-201ENST00000603837 TMEM259Q4ZIN3 620 aa5.52□□□□□ -1.53
LINC01109-201ENST00000603837 ODR4Q5SWX8 454 aa5.52□□□□□ -1.53
LINC01109-201ENST00000603837 SPTLC3Q9NUV7 552 aa5.52□□□□□ -1.53
LINC01109-201ENST00000603837 CWC15Q9P013 229 aaKnown RBP5.52□□□□□ -1.53
LINC01109-201ENST00000603837 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.52□□□□□ -1.53
LINC01109-201ENST00000603837 TMEM63CQ9P1W3 806 aa5.52□□□□□ -1.53
LINC01109-201ENST00000603837 NPC1L1Q9UHC9 1359 aa5.52□□□□□ -1.53
LINC01109-201ENST00000603837 BOLA2-SMG1P6H3BVE0 249 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 CTAGE5O15320 804 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 PER1O15534 1290 aaPredicted RBP5.51□□□□□ -1.53
LINC01109-201ENST00000603837 CBFA2T2O43439 604 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 LRRC41Q15345 812 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 PTPRNQ16849 979 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 MCTP2Q6DN12 878 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 LYPD8Q6UX82 237 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 NPAS4Q8IUM7 802 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 FAM184AQ8NB25 1140 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 NFATC2IPQ8NCF5 419 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 CWC25Q9NXE8 425 aaPredicted RBP5.51□□□□□ -1.53
LINC01109-201ENST00000603837 DDX56Q9NY93 547 aaKnown RBP5.51□□□□□ -1.53
LINC01109-201ENST00000603837 PRKAG2Q9UGJ0 569 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 USP25Q9UHP3 1055 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 ZNF232Q9UNY5 417 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 SCINQ9Y6U3 715 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 ANKRD30BQ9BXX2 1392 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 KIAA1107Q9UPP5 1409 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 PZPP20742 1482 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 PREX1Q8TCU6 1659 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 NPHP1O15259 732 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 IPO7O95373 1038 aaKnown RBP5.51□□□□□ -1.53
LINC01109-201ENST00000603837 TPM3P06753 285 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 VDRP11473 427 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 IL4RP24394 825 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 SAFB2Q14151 953 aaKnown RBP eCLIP5.51□□□□□ -1.53
LINC01109-201ENST00000603837 CAVIN1Q6NZI2 390 aaKnown RBP5.51□□□□□ -1.53
LINC01109-201ENST00000603837 C17orf53Q8N3J3 647 aaPredicted RBP5.51□□□□□ -1.53
LINC01109-201ENST00000603837 CCDC191Q8NCU4 936 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 FLCNQ8NFG4 579 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 SLX1AQ9BQ83 275 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 IER2Q9BTL4 223 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 NUCKS1Q9H1E3 243 aaKnown RBP5.51□□□□□ -1.53
LINC01109-201ENST00000603837 LCMT1Q9UIC8 334 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 DAPK1P53355 1430 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 HECW2Q9P2P5 1572 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 CCDC196A0A1B0GTZ2 297 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 PRC1O43663 620 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 CCNYL3P0C7X3 344 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 TRIML1Q8N9V2 468 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 RETREG1Q9H6L5 497 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 VRTNQ9H8Y1 702 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 PTPRHQ9HD43 1115 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 JADE2Q9NQC1 790 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 ATG3Q9NT62 314 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 PAXBP1Q9Y5B6 917 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 NCOA3Q9Y6Q9 1424 aa5.51□□□□□ -1.53
LINC01109-201ENST00000603837 TIMM44O43615 452 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 DNAJA1P31689 397 aaKnown RBP5.5□□□□□ -1.53
LINC01109-201ENST00000603837 DDIT3P35638 169 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 TEX35Q5T0J7 233 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.5□□□□□ -1.53
LINC01109-201ENST00000603837 DRC7Q8IY82 874 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 ZNF397Q8NF99 534 aaPredicted RBP5.5□□□□□ -1.53
LINC01109-201ENST00000603837 NEK11Q8NG66 645 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 TBC1D22AQ8WUA7 517 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 PBXIP1Q96AQ6 731 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 VMP1Q96GC9 406 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 CEP89Q96ST8 783 aa5.5□□□□□ -1.53
LINC01109-201ENST00000603837 ST7Q9NRC1 585 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms