RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 GRIK5Q16478 980 aa12.11□□□□□ -0.47
SGMS1-206ENST00000602565 MEI1Q5TIA1 1274 aa12.11□□□□□ -0.47
SGMS1-206ENST00000602565 CLEC4MQ9H2X3 399 aaPredicted RBP12.11□□□□□ -0.47
SGMS1-206ENST00000602565 PRDM6Q9NQX0 595 aa12.11□□□□□ -0.47
SGMS1-206ENST00000602565 SOX13Q9UN79 622 aa12.11□□□□□ -0.47
SGMS1-206ENST00000602565 CDC25BP30305 580 aa12.1□□□□□ -0.47
SGMS1-206ENST00000602565 FAM117BQ6P1L5 589 aa12.1□□□□□ -0.47
SGMS1-206ENST00000602565 GPN3Q9UHW5 284 aaPredicted RBP12.1□□□□□ -0.47
SGMS1-206ENST00000602565 PPME1Q9Y570 386 aa12.1□□□□□ -0.47
SGMS1-206ENST00000602565 SCAMP3O14828 347 aaKnown RBP12.09□□□□□ -0.47
SGMS1-206ENST00000602565 DGKGP49619 791 aa12.09□□□□□ -0.47
SGMS1-206ENST00000602565 MSL1Q68DK7 614 aa12.09□□□□□ -0.47
SGMS1-206ENST00000602565 ADAMTSL4Q6UY14 1074 aa12.09□□□□□ -0.47
SGMS1-206ENST00000602565 H3BRJ5 948 aa12.08□□□□□ -0.48
SGMS1-206ENST00000602565 EPHA1P21709 976 aa12.08□□□□□ -0.48
SGMS1-206ENST00000602565 PCDH1Q08174 1060 aa12.08□□□□□ -0.48
SGMS1-206ENST00000602565 IKBKEQ14164 716 aa12.08□□□□□ -0.48
SGMS1-206ENST00000602565 RPS26P11Q5JNZ5 115 aaPredicted RBP12.08□□□□□ -0.48
SGMS1-206ENST00000602565 TPTE2Q6XPS3 522 aa12.08□□□□□ -0.48
SGMS1-206ENST00000602565 ZSCAN1Q8NBB4 408 aa12.08□□□□□ -0.48
SGMS1-206ENST00000602565 ST13P50502 369 aaKnown RBP12.07□□□□□ -0.48
SGMS1-206ENST00000602565 VN1R5Q7Z5H4 357 aa12.07□□□□□ -0.48
SGMS1-206ENST00000602565 CEP44Q9C0F1 390 aa12.07□□□□□ -0.48
SGMS1-206ENST00000602565 USP35Q9P2H5 1018 aa12.07□□□□□ -0.48
SGMS1-206ENST00000602565 LINC01387J3KSC0 135 aa12.06□□□□□ -0.48
SGMS1-206ENST00000602565 FBXO24O75426 580 aa12.06□□□□□ -0.48
SGMS1-206ENST00000602565 TCF3P15923 654 aa12.06□□□□□ -0.48
SGMS1-206ENST00000602565 TXNDC11Q6PKC3 985 aa12.06□□□□□ -0.48
SGMS1-206ENST00000602565 USP31Q70CQ4 1352 aa12.05□□□□□ -0.48
SGMS1-206ENST00000602565 PIK3R2O00459 728 aa12.05□□□□□ -0.48
SGMS1-206ENST00000602565 ARHGEF15O94989 841 aa12.05□□□□□ -0.48
SGMS1-206ENST00000602565 ZNF76P36508 570 aa12.05□□□□□ -0.48
SGMS1-206ENST00000602565 BAG6P46379 1132 aa12.05□□□□□ -0.48
SGMS1-206ENST00000602565 ARL4DP49703 201 aa12.05□□□□□ -0.48
SGMS1-206ENST00000602565 INSM1Q01101 510 aaPredicted RBP12.05□□□□□ -0.48
SGMS1-206ENST00000602565 CCDC85BQ15834 202 aaPredicted RBP12.05□□□□□ -0.48
SGMS1-206ENST00000602565 DMRTC2Q8IXT2 367 aaPredicted RBP12.05□□□□□ -0.48
SGMS1-206ENST00000602565 SLC7A3Q8WY07 619 aa12.05□□□□□ -0.48
SGMS1-206ENST00000602565 METTL5Q9NRN9 209 aaKnown RBP12.05□□□□□ -0.48
SGMS1-206ENST00000602565 NID1P14543 1247 aa12.04□□□□□ -0.48
SGMS1-206ENST00000602565 ZNF157P51786 506 aaPredicted RBP12.04□□□□□ -0.48
SGMS1-206ENST00000602565 PPP2R3AQ06190 1150 aa12.04□□□□□ -0.48
SGMS1-206ENST00000602565 TRAPPC3LQ5T215 181 aa12.04□□□□□ -0.48
SGMS1-206ENST00000602565 DDX54Q8TDD1 881 aaKnown RBP12.04□□□□□ -0.48
SGMS1-206ENST00000602565 MKL2Q9ULH7 1088 aa12.04□□□□□ -0.48
SGMS1-206ENST00000602565 ESRRAP11474 423 aaPredicted RBP12.03□□□□□ -0.48
SGMS1-206ENST00000602565 LDLRAD1Q5T700 205 aa12.03□□□□□ -0.48
SGMS1-206ENST00000602565 PODNQ7Z5L7 613 aa12.03□□□□□ -0.48
SGMS1-206ENST00000602565 ANKRD24Q8TF21 1146 aa12.03□□□□□ -0.48
SGMS1-206ENST00000602565 RNF34Q969K3 372 aa12.03□□□□□ -0.48
SGMS1-206ENST00000602565 SEC31BQ9NQW1 1179 aa12.03□□□□□ -0.48
SGMS1-206ENST00000602565 PIP4K2BP78356 416 aa12.02□□□□□ -0.49
SGMS1-206ENST00000602565 FAAP100Q0VG06 881 aa12.02□□□□□ -0.49
SGMS1-206ENST00000602565 TMEM39AQ9NV64 488 aa12.02□□□□□ -0.49
SGMS1-206ENST00000602565 SPDYE3A6NKU9 549 aa12.01□□□□□ -0.49
SGMS1-206ENST00000602565 B3GALT4O96024 378 aa12.01□□□□□ -0.49
SGMS1-206ENST00000602565 HOXB4P17483 251 aaPredicted RBP12.01□□□□□ -0.49
SGMS1-206ENST00000602565 SNRPNP63162 240 aaKnown RBP12.01□□□□□ -0.49
SGMS1-206ENST00000602565 FANCCQ00597 558 aa12.01□□□□□ -0.49
SGMS1-206ENST00000602565 ZNF423Q2M1K9 1284 aa12.01□□□□□ -0.49
SGMS1-206ENST00000602565 SV2BQ7L1I2 683 aa12.01□□□□□ -0.49
SGMS1-206ENST00000602565 HS2ST1Q7LGA3 356 aa12.01□□□□□ -0.49
SGMS1-206ENST00000602565 WNT8BQ93098 351 aa12.01□□□□□ -0.49
SGMS1-206ENST00000602565 IGSF5Q9NSI5 407 aa12.01□□□□□ -0.49
SGMS1-206ENST00000602565 GNB5O14775 395 aa12□□□□□ -0.49
SGMS1-206ENST00000602565 COL9A3Q14050 684 aaPredicted RBP12□□□□□ -0.49
SGMS1-206ENST00000602565 MAP4K3Q8IVH8 894 aa12□□□□□ -0.49
SGMS1-206ENST00000602565 NOC4LQ9BVI4 516 aaKnown RBP12□□□□□ -0.49
SGMS1-206ENST00000602565 SRA1Q9HD15 236 aaKnown RBP12□□□□□ -0.49
SGMS1-206ENST00000602565 SOX1O00570 391 aaPredicted RBP11.99□□□□□ -0.49
SGMS1-206ENST00000602565 FSCN2O14926 492 aa11.99□□□□□ -0.49
SGMS1-206ENST00000602565 RAC1P63000 192 aa11.99□□□□□ -0.49
SGMS1-206ENST00000602565 GSTM4Q03013 218 aa11.99□□□□□ -0.49
SGMS1-206ENST00000602565 C19orf57Q0VDD7 668 aa11.99□□□□□ -0.49
SGMS1-206ENST00000602565 NECAB3Q96P71 396 aaPredicted RBP11.99□□□□□ -0.49
SGMS1-206ENST00000602565 CARD10Q9BWT7 1032 aa11.99□□□□□ -0.49
SGMS1-206ENST00000602565 GGT7Q9UJ14 662 aa11.99□□□□□ -0.49
SGMS1-206ENST00000602565 SAMM50Q9Y512 469 aa11.99□□□□□ -0.49
SGMS1-206ENST00000602565 EIF4EBP3O60516 100 aaPredicted RBP11.98□□□□□ -0.49
SGMS1-206ENST00000602565 CELA3AP09093 270 aa11.98□□□□□ -0.49
SGMS1-206ENST00000602565 DCAF11Q8TEB1 546 aa11.98□□□□□ -0.49
SGMS1-206ENST00000602565 SOX17Q9H6I2 414 aaPredicted RBP11.98□□□□□ -0.49
SGMS1-206ENST00000602565 OSGEPQ9NPF4 335 aa11.98□□□□□ -0.49
SGMS1-206ENST00000602565 HDLBPQ00341 1268 aaKnown RBP11.97□□□□□ -0.49
SGMS1-206ENST00000602565 MAP3K11Q16584 847 aa11.97□□□□□ -0.49
SGMS1-206ENST00000602565 DTWD1Q8N5C7 304 aa11.97□□□□□ -0.49
SGMS1-206ENST00000602565 KLHL23Q8NBE8 558 aa11.97□□□□□ -0.49
SGMS1-206ENST00000602565 TRIM11Q96F44 468 aa11.97□□□□□ -0.49
SGMS1-206ENST00000602565 PLVAPQ9BX97 442 aa11.97□□□□□ -0.49
SGMS1-206ENST00000602565 ENC1O14682 589 aa11.96□□□□□ -0.49
SGMS1-206ENST00000602565 HMGB1P09429 215 aaKnown RBP11.96□□□□□ -0.49
SGMS1-206ENST00000602565 RLBP1P12271 317 aa11.96□□□□□ -0.49
SGMS1-206ENST00000602565 C9orf131Q5VYM1 1079 aa11.96□□□□□ -0.49
SGMS1-206ENST00000602565 LINC00114Q6XXX2 140 aa11.96□□□□□ -0.49
SGMS1-206ENST00000602565 BEND7Q8N7W2 519 aaPredicted RBP11.96□□□□□ -0.49
SGMS1-206ENST00000602565 NOP53Q9NZM5 478 aaKnown RBP11.96□□□□□ -0.49
SGMS1-206ENST00000602565 STK17AQ9UEE5 414 aa11.96□□□□□ -0.49
SGMS1-206ENST00000602565 LORP23490 312 aaPredicted RBP11.95□□□□□ -0.5
SGMS1-206ENST00000602565 SETDB1Q15047 1291 aa11.95□□□□□ -0.5
SGMS1-206ENST00000602565 ADAMTS8Q9UP79 889 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms