RNA–Protein interactions for RNA: ENST00000602212.5

NPAS1-208, Transcript of neuronal PAS domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS1, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-208ENST00000602212 TCRBV5S4A2TA0A5A2 114 aa27.19■■□□□ 1.94
NPAS1-208ENST00000602212 ME3Q16798 604 aa27.19■■□□□ 1.94
NPAS1-208ENST00000602212 BAG4O95429 457 aaKnown RBP27.18■■□□□ 1.94
NPAS1-208ENST00000602212 TOB2Q14106 344 aaPredicted RBP27.18■■□□□ 1.94
NPAS1-208ENST00000602212 TTLL5Q6EMB2 1281 aa27.17■■□□□ 1.94
NPAS1-208ENST00000602212 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.17■■□□□ 1.94
NPAS1-208ENST00000602212 CCDC83Q8IWF9 413 aa27.17■■□□□ 1.94
NPAS1-208ENST00000602212 GYG1P46976 350 aa27.16■■□□□ 1.94
NPAS1-208ENST00000602212 ST3GAL1Q11201 340 aa27.16■■□□□ 1.94
NPAS1-208ENST00000602212 PRR5LQ6MZQ0 368 aa27.16■■□□□ 1.94
NPAS1-208ENST00000602212 CTNNA3Q9UI47 895 aa27.16■■□□□ 1.94
NPAS1-208ENST00000602212 MAP3K12Q12852 859 aa27.16■■□□□ 1.94
NPAS1-208ENST00000602212 BRD1O95696 1058 aa27.15■■□□□ 1.94
NPAS1-208ENST00000602212 E7EWF7 191 aa27.14■■□□□ 1.94
NPAS1-208ENST00000602212 FGAP02671 866 aa27.14■■□□□ 1.94
NPAS1-208ENST00000602212 HMGB1P09429 215 aaKnown RBP27.14■■□□□ 1.93
NPAS1-208ENST00000602212 GSE1Q14687 1217 aa27.14■■□□□ 1.93
NPAS1-208ENST00000602212 MAGEB6Q8N7X4 407 aa27.14■■□□□ 1.93
NPAS1-208ENST00000602212 IQSEC3Q9UPP2 1182 aaPredicted RBP27.14■■□□□ 1.93
NPAS1-208ENST00000602212 NECAB1Q8N987 351 aa27.13■■□□□ 1.93
NPAS1-208ENST00000602212 ANKRD2Q9GZV1 360 aa27.13■■□□□ 1.93
NPAS1-208ENST00000602212 GNL3LQ9NVN8 582 aaKnown RBP27.13■■□□□ 1.93
NPAS1-208ENST00000602212 COL1A1P02452 1464 aaPredicted RBP27.13■■□□□ 1.93
NPAS1-208ENST00000602212 PLSCR1O15162 318 aa27.13■■□□□ 1.93
NPAS1-208ENST00000602212 TRAK2O60296 914 aa27.13■■□□□ 1.93
NPAS1-208ENST00000602212 CAVIN4Q5BKX8 364 aa27.13■■□□□ 1.93
NPAS1-208ENST00000602212 SMC3Q9UQE7 1217 aa27.13■■□□□ 1.93
NPAS1-208ENST00000602212 HMGB2P26583 209 aaKnown RBP27.12■■□□□ 1.93
NPAS1-208ENST00000602212 RXRBP28702 533 aa27.12■■□□□ 1.93
NPAS1-208ENST00000602212 FAM84BQ96KN1 310 aaPredicted RBP27.12■■□□□ 1.93
NPAS1-208ENST00000602212 SERPINB2P05120 415 aa27.11■■□□□ 1.93
NPAS1-208ENST00000602212 IMMTQ16891 758 aaKnown RBP27.11■■□□□ 1.93
NPAS1-208ENST00000602212 Q6ZUG5 572 aa27.11■■□□□ 1.93
NPAS1-208ENST00000602212 DHX32Q7L7V1 743 aaKnown RBP27.11■■□□□ 1.93
NPAS1-208ENST00000602212 APBA3O96018 575 aa27.11■■□□□ 1.93
NPAS1-208ENST00000602212 FOXD4L5Q5VV16 416 aaPredicted RBP27.11■■□□□ 1.93
NPAS1-208ENST00000602212 FOXD4L4Q8WXT5 416 aaPredicted RBP27.11■■□□□ 1.93
NPAS1-208ENST00000602212 KLRK1P26718 216 aa27.1■■□□□ 1.93
NPAS1-208ENST00000602212 HAND2P61296 217 aa27.1■■□□□ 1.93
NPAS1-208ENST00000602212 GRAPQ13588 217 aa27.1■■□□□ 1.93
NPAS1-208ENST00000602212 GRAPLQ8TC17 118 aaPredicted RBP27.1■■□□□ 1.93
NPAS1-208ENST00000602212 GOLGA6L22H0YM25 854 aa27.1■■□□□ 1.93
NPAS1-208ENST00000602212 ZNF827Q17R98 1081 aa27.1■■□□□ 1.93
NPAS1-208ENST00000602212 VPS37DQ86XT2 251 aa27.1■■□□□ 1.93
NPAS1-208ENST00000602212 AIDAQ96BJ3 306 aa27.1■■□□□ 1.93
NPAS1-208ENST00000602212 PTMSP20962 102 aa27.09■■□□□ 1.93
NPAS1-208ENST00000602212 STRBPQ96SI9 672 aaKnown RBP27.09■■□□□ 1.93
NPAS1-208ENST00000602212 LRRC2Q9BYS8 371 aa27.09■■□□□ 1.93
NPAS1-208ENST00000602212 ST5P78524 1137 aa27.08■■□□□ 1.93
NPAS1-208ENST00000602212 EXOSC10Q01780 885 aaKnown RBP27.08■■□□□ 1.93
NPAS1-208ENST00000602212 DDR1Q08345 913 aa27.08■■□□□ 1.93
NPAS1-208ENST00000602212 FBXO33Q7Z6M2 555 aa27.08■■□□□ 1.93
NPAS1-208ENST00000602212 LRP2BPQ9P2M1 347 aa27.08■■□□□ 1.93
NPAS1-208ENST00000602212 WDR33Q9C0J8 1336 aaKnown RBP27.08■■□□□ 1.93
NPAS1-208ENST00000602212 MCTP1Q6DN14 999 aa27.08■■□□□ 1.93
NPAS1-208ENST00000602212 GJB2P29033 226 aa27.07■■□□□ 1.92
NPAS1-208ENST00000602212 TFCP2L1Q9NZI6 479 aa27.07■■□□□ 1.92
NPAS1-208ENST00000602212 MYH13Q9UKX3 1938 aa27.07■■□□□ 1.92
NPAS1-208ENST00000602212 CRY2Q49AN0 593 aa27.07■■□□□ 1.92
NPAS1-208ENST00000602212 DENND2AQ9ULE3 1009 aa27.07■■□□□ 1.92
NPAS1-208ENST00000602212 TNS1Q9HBL0 1735 aaKnown RBP27.06■■□□□ 1.92
NPAS1-208ENST00000602212 POLRMTO00411 1230 aaKnown RBP27.06■■□□□ 1.92
NPAS1-208ENST00000602212 ZNF213O14771 459 aa27.06■■□□□ 1.92
NPAS1-208ENST00000602212 DTNBO60941 627 aa27.06■■□□□ 1.92
NPAS1-208ENST00000602212 MBD4O95243 580 aa27.06■■□□□ 1.92
NPAS1-208ENST00000602212 BRF1Q92994 677 aa27.06■■□□□ 1.92
NPAS1-208ENST00000602212 AKT1S1Q96B36 256 aa27.06■■□□□ 1.92
NPAS1-208ENST00000602212 SYT1P21579 422 aa27.05■■□□□ 1.92
NPAS1-208ENST00000602212 SLC51AQ86UW1 340 aa27.05■■□□□ 1.92
NPAS1-208ENST00000602212 RPGRQ92834 1020 aaKnown RBP27.05■■□□□ 1.92
NPAS1-208ENST00000602212 AGXT2Q9BYV1 514 aa27.05■■□□□ 1.92
NPAS1-208ENST00000602212 APPP05067 770 aa27.05■■□□□ 1.92
NPAS1-208ENST00000602212 FGD1P98174 961 aa27.05■■□□□ 1.92
NPAS1-208ENST00000602212 STK3Q13188 491 aa27.05■■□□□ 1.92
NPAS1-208ENST00000602212 ABCF2Q9UG63 623 aa27.05■■□□□ 1.92
NPAS1-208ENST00000602212 SEMA3EO15041 775 aa27.04■■□□□ 1.92
NPAS1-208ENST00000602212 CHAMP1Q96JM3 812 aa27.04■■□□□ 1.92
NPAS1-208ENST00000602212 ARMT1Q9H993 441 aa27.04■■□□□ 1.92
NPAS1-208ENST00000602212 IRS2Q9Y4H2 1338 aa27.04■■□□□ 1.92
NPAS1-208ENST00000602212 HIBADHP31937 336 aaKnown RBP27.04■■□□□ 1.92
NPAS1-208ENST00000602212 NBPF3Q9H094 633 aa27.04■■□□□ 1.92
NPAS1-208ENST00000602212 CACNA1SQ13698 1873 aa27.03■■□□□ 1.92
NPAS1-208ENST00000602212 STX6O43752 255 aa27.03■■□□□ 1.92
NPAS1-208ENST00000602212 GTF3C6Q969F1 213 aa27.03■■□□□ 1.92
NPAS1-208ENST00000602212 CHST3Q7LGC8 479 aa27.02■■□□□ 1.92
NPAS1-208ENST00000602212 ZMYM6O95789 1325 aa27.02■■□□□ 1.92
NPAS1-208ENST00000602212 PNPLA7Q6ZV29 1317 aa27.02■■□□□ 1.92
NPAS1-208ENST00000602212 PATL2C9JE40 543 aaKnown RBP27.02■■□□□ 1.92
NPAS1-208ENST00000602212 ALX1Q15699 326 aa27.02■■□□□ 1.92
NPAS1-208ENST00000602212 COL23A1Q86Y22 540 aaPredicted RBP27.02■■□□□ 1.92
NPAS1-208ENST00000602212 LCORLQ8N3X6 602 aa27.02■■□□□ 1.92
NPAS1-208ENST00000602212 EPB41L4AQ9HCS5 686 aaPredicted RBP27.02■■□□□ 1.92
NPAS1-208ENST00000602212 PDS5AQ29RF7 1337 aaKnown RBP27.01■■□□□ 1.92
NPAS1-208ENST00000602212 SKOR2Q2VWA4 1001 aaPredicted RBP27.01■■□□□ 1.91
NPAS1-208ENST00000602212 TXNRD3Q86VQ6 643 aa27.01■■□□□ 1.91
NPAS1-208ENST00000602212 MB21D2Q8IYB1 491 aaPredicted RBP27.01■■□□□ 1.91
NPAS1-208ENST00000602212 RAI14Q9P0K7 980 aa27.01■■□□□ 1.91
NPAS1-208ENST00000602212 ANKIB1Q9P2G1 1089 aa27.01■■□□□ 1.91
NPAS1-208ENST00000602212 ZSCAN22P10073 491 aaPredicted RBP27.01■■□□□ 1.91
NPAS1-208ENST00000602212 CYP7A1P22680 504 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms