RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 MAP3K7CLP57077 242 aa13.73□□□□□ -0.21
SHANK2-218ENST00000601538 CHMP4BP1P59074 171 aa13.73□□□□□ -0.21
SHANK2-218ENST00000601538 GDAP1L1Q96MZ0 367 aa13.73□□□□□ -0.21
SHANK2-218ENST00000601538 GFM2Q969S9 779 aaKnown RBP13.73□□□□□ -0.21
SHANK2-218ENST00000601538 PUF60Q9UHX1 559 aaKnown RBP13.73□□□□□ -0.21
SHANK2-218ENST00000601538 RGS22Q8NE09 1264 aa13.73□□□□□ -0.21
SHANK2-218ENST00000601538 RUFY3Q7L099 469 aa13.73□□□□□ -0.21
SHANK2-218ENST00000601538 IFT81Q8WYA0 676 aa13.73□□□□□ -0.21
SHANK2-218ENST00000601538 GOLGA6BA6NDN3 693 aa13.72□□□□□ -0.21
SHANK2-218ENST00000601538 GOLGA8AA7E2F4 631 aa13.72□□□□□ -0.21
SHANK2-218ENST00000601538 PFDN1O60925 122 aa13.72□□□□□ -0.21
SHANK2-218ENST00000601538 HIP1RO75146 1068 aa13.72□□□□□ -0.21
SHANK2-218ENST00000601538 IARSP41252 1262 aaKnown RBP13.72□□□□□ -0.21
SHANK2-218ENST00000601538 COG7P83436 770 aa13.72□□□□□ -0.21
SHANK2-218ENST00000601538 CAVIN4Q5BKX8 364 aa13.72□□□□□ -0.21
SHANK2-218ENST00000601538 TMEM57Q8N5G2 664 aa13.72□□□□□ -0.21
SHANK2-218ENST00000601538 MRPS27Q92552 414 aaKnown RBP13.72□□□□□ -0.21
SHANK2-218ENST00000601538 RIOK3O14730 519 aaKnown RBP13.72□□□□□ -0.21
SHANK2-218ENST00000601538 NEK11Q8NG66 645 aa13.72□□□□□ -0.21
SHANK2-218ENST00000601538 MICAL1Q8TDZ2 1067 aa13.72□□□□□ -0.21
SHANK2-218ENST00000601538 PPP1R1BQ9UD71 204 aaPredicted RBP13.72□□□□□ -0.21
SHANK2-218ENST00000601538 ATF3P18847 181 aa13.72□□□□□ -0.21
SHANK2-218ENST00000601538 RBM5P52756 815 aaKnown RBP eCLIP13.72□□□□□ -0.212e-6■■■■□ 20
SHANK2-218ENST00000601538 GTF3C6Q969F1 213 aa13.72□□□□□ -0.21
SHANK2-218ENST00000601538 FAM210AQ96ND0 272 aa13.72□□□□□ -0.21
SHANK2-218ENST00000601538 CCDC186Q7Z3E2 898 aa13.72□□□□□ -0.21
SHANK2-218ENST00000601538 AMOTQ4VCS5 1084 aa13.72□□□□□ -0.21
SHANK2-218ENST00000601538 TMTC2Q8N394 836 aa13.72□□□□□ -0.21
SHANK2-218ENST00000601538 GSDMBQ8TAX9 411 aa13.72□□□□□ -0.21
SHANK2-218ENST00000601538 SPG7Q9UQ90 795 aa13.72□□□□□ -0.21
SHANK2-218ENST00000601538 RILPL1Q5EBL4 403 aa13.72□□□□□ -0.21
SHANK2-218ENST00000601538 RRP15Q9Y3B9 282 aaKnown RBP13.72□□□□□ -0.21
SHANK2-218ENST00000601538 HSPA1LP34931 641 aa13.72□□□□□ -0.21
SHANK2-218ENST00000601538 VWA3BQ502W6 1294 aa13.72□□□□□ -0.21
SHANK2-218ENST00000601538 NBPF6Q5VWK0 638 aa13.72□□□□□ -0.21
SHANK2-218ENST00000601538 NBPF5PQ86XG9 351 aaPredicted RBP13.72□□□□□ -0.21
SHANK2-218ENST00000601538 NBPF4Q96M43 638 aa13.72□□□□□ -0.21
SHANK2-218ENST00000601538 FAM169AQ9Y6X4 670 aa13.72□□□□□ -0.21
SHANK2-218ENST00000601538 CRCPO75575 148 aa13.71□□□□□ -0.21
SHANK2-218ENST00000601538 ZNF692Q9BU19 519 aaPredicted RBP13.71□□□□□ -0.21
SHANK2-218ENST00000601538 TSR2Q969E8 191 aaKnown RBP13.71□□□□□ -0.21
SHANK2-218ENST00000601538 RNF216Q9NWF9 866 aaPredicted RBP13.71□□□□□ -0.21
SHANK2-218ENST00000601538 RTL1A6NKG5 1358 aa13.71□□□□□ -0.21
SHANK2-218ENST00000601538 TATP17735 454 aaPredicted RBP13.71□□□□□ -0.21
SHANK2-218ENST00000601538 EVCP57679 992 aa13.71□□□□□ -0.21
SHANK2-218ENST00000601538 TSKSQ9UJT2 592 aa13.71□□□□□ -0.21
SHANK2-218ENST00000601538 SH3BP5O60239 455 aa13.71□□□□□ -0.21
SHANK2-218ENST00000601538 BLMP54132 1417 aaPredicted RBP13.71□□□□□ -0.21
SHANK2-218ENST00000601538 TRIM6Q9C030 488 aaPredicted RBP13.71□□□□□ -0.21
SHANK2-218ENST00000601538 TTF2Q9UNY4 1162 aaKnown RBP13.71□□□□□ -0.21
SHANK2-218ENST00000601538 RNF8O76064 485 aa13.71□□□□□ -0.21
SHANK2-218ENST00000601538 SPTY2D1Q68D10 685 aaPredicted RBP13.71□□□□□ -0.21
SHANK2-218ENST00000601538 TYRO3Q06418 890 aa13.71□□□□□ -0.22
SHANK2-218ENST00000601538 RASEFQ8IZ41 740 aa13.71□□□□□ -0.22
SHANK2-218ENST00000601538 ZSCAN29Q8IWY8 852 aaPredicted RBP13.71□□□□□ -0.22
SHANK2-218ENST00000601538 UBL4BQ8N7F7 174 aa13.71□□□□□ -0.22
SHANK2-218ENST00000601538 PARD3Q8TEW0 1356 aa13.71□□□□□ -0.22
SHANK2-218ENST00000601538 GIPC1O14908 333 aa13.7□□□□□ -0.22
SHANK2-218ENST00000601538 MAK16Q9BXY0 300 aaKnown RBP13.7□□□□□ -0.22
SHANK2-218ENST00000601538 DRC3Q9H069 523 aa13.7□□□□□ -0.22
SHANK2-218ENST00000601538 RBM27Q9P2N5 1060 aaKnown RBP13.7□□□□□ -0.22
SHANK2-218ENST00000601538 PHACTR2O75167 634 aa13.7□□□□□ -0.22
SHANK2-218ENST00000601538 METAP2P50579 478 aaKnown RBP eCLIP13.7□□□□□ -0.22
SHANK2-218ENST00000601538 PDE4BQ07343 736 aa13.7□□□□□ -0.22
SHANK2-218ENST00000601538 TAF7Q15545 349 aaPredicted RBP13.7□□□□□ -0.22
SHANK2-218ENST00000601538 LRRD1A4D1F6 860 aa13.7□□□□□ -0.22
SHANK2-218ENST00000601538 SNCBQ16143 134 aa13.7□□□□□ -0.22
SHANK2-218ENST00000601538 IFIT3O14879 490 aaKnown RBP13.7□□□□□ -0.22
SHANK2-218ENST00000601538 EVI5O60447 810 aa13.7□□□□□ -0.22
SHANK2-218ENST00000601538 TERF2Q15554 542 aa13.7□□□□□ -0.22
SHANK2-218ENST00000601538 ARHGAP45Q92619 1136 aa13.7□□□□□ -0.22
SHANK2-218ENST00000601538 ZNF131P52739 623 aa13.7□□□□□ -0.22
SHANK2-218ENST00000601538 LGSNQ5TDP6 509 aa13.7□□□□□ -0.22
SHANK2-218ENST00000601538 GIMAP6Q6P9H5 292 aa13.7□□□□□ -0.22
SHANK2-218ENST00000601538 SMARCC2Q8TAQ2 1214 aa13.7□□□□□ -0.22
SHANK2-218ENST00000601538 ATP2A3Q93084 1043 aa13.7□□□□□ -0.22
SHANK2-218ENST00000601538 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.7□□□□□ -0.22
SHANK2-218ENST00000601538 RABGGTAQ92696 567 aa13.7□□□□□ -0.22
SHANK2-218ENST00000601538 NAPGQ99747 312 aaPredicted RBP13.7□□□□□ -0.22
SHANK2-218ENST00000601538 SSH2Q76I76 1423 aa13.7□□□□□ -0.22
SHANK2-218ENST00000601538 IDEP14735 1019 aa13.7□□□□□ -0.22
SHANK2-218ENST00000601538 HPDP32754 393 aaPredicted RBP13.7□□□□□ -0.22
SHANK2-218ENST00000601538 GGNBP2Q9H3C7 697 aa13.7□□□□□ -0.22
SHANK2-218ENST00000601538 HAUS2Q9NVX0 235 aa13.7□□□□□ -0.22
SHANK2-218ENST00000601538 NUCB1Q02818 461 aa13.69□□□□□ -0.22
SHANK2-218ENST00000601538 C8orf74Q6P047 294 aa13.69□□□□□ -0.22
SHANK2-218ENST00000601538 CAPZA3Q96KX2 299 aa13.69□□□□□ -0.22
SHANK2-218ENST00000601538 ZNF652Q9Y2D9 606 aa13.69□□□□□ -0.22
SHANK2-218ENST00000601538 RHOXF2BP0C7M4 288 aa13.69□□□□□ -0.22
SHANK2-218ENST00000601538 ZNF444Q8N0Y2 327 aaPredicted RBP13.69□□□□□ -0.22
SHANK2-218ENST00000601538 PDCD7Q8N8D1 485 aaKnown RBP13.69□□□□□ -0.22
SHANK2-218ENST00000601538 RHOXF2Q9BQY4 288 aa13.69□□□□□ -0.22
SHANK2-218ENST00000601538 DYNC1I2Q13409 638 aaKnown RBP13.69□□□□□ -0.22
SHANK2-218ENST00000601538 VSIG1Q86XK7 387 aa13.69□□□□□ -0.22
SHANK2-218ENST00000601538 NUTM2AQ8IVF1 878 aaPredicted RBP13.69□□□□□ -0.22
SHANK2-218ENST00000601538 GUCA1BQ9UMX6 200 aa13.69□□□□□ -0.22
SHANK2-218ENST00000601538 WDHD1O75717 1129 aaPredicted RBP13.69□□□□□ -0.22
SHANK2-218ENST00000601538 CABP4P57796 275 aa13.69□□□□□ -0.22
SHANK2-218ENST00000601538 PPP2R5EQ16537 467 aa13.69□□□□□ -0.22
SHANK2-218ENST00000601538 FAF1Q9UNN5 650 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms