RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 PIH1D3Q9NQM4 214 aaKnown RBP27.25■■□□□ 1.95
IRF3-228ENST00000601291 COL1A1P02452 1464 aaPredicted RBP27.24■■□□□ 1.95
IRF3-228ENST00000601291 RNF113AO15541 343 aaKnown RBP27.24■■□□□ 1.95
IRF3-228ENST00000601291 FAM227BQ96M60 508 aa27.24■■□□□ 1.95
IRF3-228ENST00000601291 ZC3H12CQ9C0D7 883 aaKnown RBP27.24■■□□□ 1.95
IRF3-228ENST00000601291 IDH1O75874 414 aaKnown RBP27.23■■□□□ 1.95
IRF3-228ENST00000601291 C22orf23Q9BZE7 217 aa27.23■■□□□ 1.95
IRF3-228ENST00000601291 ANO2Q9NQ90 1003 aa27.23■■□□□ 1.95
IRF3-228ENST00000601291 A0A0D9SFI3 127 aa27.22■■□□□ 1.95
IRF3-228ENST00000601291 C21orf2O43822 256 aa27.22■■□□□ 1.95
IRF3-228ENST00000601291 MAP3K12Q12852 859 aa27.22■■□□□ 1.95
IRF3-228ENST00000601291 CCDC93Q567U6 631 aa27.22■■□□□ 1.95
IRF3-228ENST00000601291 SOGA3Q5TF21 947 aa27.22■■□□□ 1.95
IRF3-228ENST00000601291 KIAA1211Q6ZU35 1233 aa27.22■■□□□ 1.95
IRF3-228ENST00000601291 TDRD7Q8NHU6 1098 aaKnown RBP27.22■■□□□ 1.95
IRF3-228ENST00000601291 TBC1D32Q96NH3 1257 aa27.22■■□□□ 1.95
IRF3-228ENST00000601291 MYH13Q9UKX3 1938 aa27.22■■□□□ 1.95
IRF3-228ENST00000601291 SUPT20HQ8NEM7 779 aa27.22■■□□□ 1.95
IRF3-228ENST00000601291 CD209Q9NNX6 404 aa27.22■■□□□ 1.95
IRF3-228ENST00000601291 HELLSQ9NRZ9 838 aa27.22■■□□□ 1.95
IRF3-228ENST00000601291 EPB41L2O43491 1005 aaKnown RBP27.21■■□□□ 1.95
IRF3-228ENST00000601291 RTFDC1Q9BY42 306 aaPredicted RBP27.21■■□□□ 1.95
IRF3-228ENST00000601291 COA1Q9GZY4 146 aa27.21■■□□□ 1.95
IRF3-228ENST00000601291 IL25Q9H293 177 aa27.21■■□□□ 1.95
IRF3-228ENST00000601291 DOCK2Q92608 1830 aa27.2■■□□□ 1.95
IRF3-228ENST00000601291 RIMBP2O15034 1052 aa27.2■■□□□ 1.94
IRF3-228ENST00000601291 IL1R1P14778 569 aa27.2■■□□□ 1.94
IRF3-228ENST00000601291 CHAF1AQ13111 956 aaPredicted RBP27.2■■□□□ 1.94
IRF3-228ENST00000601291 MCMDC2Q4G0Z9 681 aa27.2■■□□□ 1.94
IRF3-228ENST00000601291 DALRD3Q5D0E6 543 aaKnown RBP27.2■■□□□ 1.94
IRF3-228ENST00000601291 ZMYM1Q5SVZ6 1142 aa27.2■■□□□ 1.94
IRF3-228ENST00000601291 RTKN2Q8IZC4 609 aa27.2■■□□□ 1.94
IRF3-228ENST00000601291 LRP2BPQ9P2M1 347 aa27.2■■□□□ 1.94
IRF3-228ENST00000601291 SLC9C2Q5TAH2 1124 aa27.19■■□□□ 1.94
IRF3-228ENST00000601291 USP26Q9BXU7 913 aa27.19■■□□□ 1.94
IRF3-228ENST00000601291 ABCF2Q9UG63 623 aa27.19■■□□□ 1.94
IRF3-228ENST00000601291 SNED1Q8TER0 1413 aa27.19■■□□□ 1.94
IRF3-228ENST00000601291 ADD2P35612 726 aa27.18■■□□□ 1.94
IRF3-228ENST00000601291 ZGPATQ8N5A5 531 aaKnown RBP27.18■■□□□ 1.94
IRF3-228ENST00000601291 WDR66Q8TBY9 1149 aa27.18■■□□□ 1.94
IRF3-228ENST00000601291 G3V3G9 751 aa27.18■■□□□ 1.94
IRF3-228ENST00000601291 UBE3CQ15386 1083 aa27.18■■□□□ 1.94
IRF3-228ENST00000601291 DCAF8Q5TAQ9 597 aa27.18■■□□□ 1.94
IRF3-228ENST00000601291 APPBP2Q92624 585 aa27.18■■□□□ 1.94
IRF3-228ENST00000601291 MYH7P12883 1935 aa27.17■■□□□ 1.94
IRF3-228ENST00000601291 PDE6AP16499 860 aa27.17■■□□□ 1.94
IRF3-228ENST00000601291 RBM25P49756 843 aaKnown RBP27.17■■□□□ 1.94
IRF3-228ENST00000601291 SALL1Q9NSC2 1324 aa27.16■■□□□ 1.94
IRF3-228ENST00000601291 CHGBP05060 677 aa27.16■■□□□ 1.94
IRF3-228ENST00000601291 MCCP23508 829 aa27.16■■□□□ 1.94
IRF3-228ENST00000601291 RAI14Q9P0K7 980 aa27.16■■□□□ 1.94
IRF3-228ENST00000601291 WWC3Q9ULE0 1092 aa27.16■■□□□ 1.94
IRF3-228ENST00000601291 IGSF3O75054 1194 aa27.15■■□□□ 1.94
IRF3-228ENST00000601291 BRCA1P38398 1863 aaKnown RBP27.15■■□□□ 1.94
IRF3-228ENST00000601291 CCDC171Q6TFL3 1326 aa27.15■■□□□ 1.94
IRF3-228ENST00000601291 ZNF532Q9HCE3 1301 aa27.15■■□□□ 1.94
IRF3-228ENST00000601291 ANP32AP39687 249 aaKnown RBP27.14■■□□□ 1.94
IRF3-228ENST00000601291 SPTY2D1Q68D10 685 aaPredicted RBP27.14■■□□□ 1.94
IRF3-228ENST00000601291 MAGEB6Q8N7X4 407 aa27.14■■□□□ 1.94
IRF3-228ENST00000601291 SEC62Q99442 399 aaKnown RBP27.14■■□□□ 1.94
IRF3-228ENST00000601291 PSMD1Q99460 953 aa27.14■■□□□ 1.94
IRF3-228ENST00000601291 LSG1Q9H089 658 aaKnown RBP27.14■■□□□ 1.94
IRF3-228ENST00000601291 MAST3O60307 1309 aa27.14■■□□□ 1.94
IRF3-228ENST00000601291 SLFNL1Q499Z3 407 aa27.14■■□□□ 1.93
IRF3-228ENST00000601291 ERICH6Q7L0X2 663 aa27.14■■□□□ 1.93
IRF3-228ENST00000601291 ZNF589Q86UQ0 364 aaPredicted RBP27.14■■□□□ 1.93
IRF3-228ENST00000601291 TMED8Q6PL24 325 aaPredicted RBP27.13■■□□□ 1.93
IRF3-228ENST00000601291 OSBP2Q969R2 916 aa27.13■■□□□ 1.93
IRF3-228ENST00000601291 KIAA2012Q0VF49 1180 aa27.12■■□□□ 1.93
IRF3-228ENST00000601291 TBC1D22AQ8WUA7 517 aa27.12■■□□□ 1.93
IRF3-228ENST00000601291 JAG2Q9Y219 1238 aa27.12■■□□□ 1.93
IRF3-228ENST00000601291 TCRBV5S4A2TA0A5A2 114 aa27.11■■□□□ 1.93
IRF3-228ENST00000601291 DOK7Q18PE1 504 aa27.11■■□□□ 1.93
IRF3-228ENST00000601291 PODNQ7Z5L7 613 aa27.11■■□□□ 1.93
IRF3-228ENST00000601291 MYO5AQ9Y4I1 1855 aaKnown RBP27.11■■□□□ 1.93
IRF3-228ENST00000601291 FAM205AQ6ZU69 1335 aa27.11■■□□□ 1.93
IRF3-228ENST00000601291 MAST2Q6P0Q8 1798 aa27.1■■□□□ 1.93
IRF3-228ENST00000601291 M0R2C6 588 aa27.1■■□□□ 1.93
IRF3-228ENST00000601291 CCDC129Q6ZRS4 1044 aa27.1■■□□□ 1.93
IRF3-228ENST00000601291 PPIP5K2O43314 1243 aa27.09■■□□□ 1.93
IRF3-228ENST00000601291 AOC3Q16853 763 aa27.09■■□□□ 1.93
IRF3-228ENST00000601291 NLGN2Q8NFZ4 835 aa27.09■■□□□ 1.93
IRF3-228ENST00000601291 PUS7LQ9H0K6 701 aaKnown RBP27.09■■□□□ 1.93
IRF3-228ENST00000601291 VPS33BQ9H267 617 aa27.09■■□□□ 1.93
IRF3-228ENST00000601291 BCS1LQ9Y276 419 aa27.09■■□□□ 1.93
IRF3-228ENST00000601291 LDHBP07195 334 aaKnown RBP27.09■■□□□ 1.93
IRF3-228ENST00000601291 PTH1RQ03431 593 aa27.09■■□□□ 1.93
IRF3-228ENST00000601291 NAA16Q6N069 864 aaPredicted RBP27.09■■□□□ 1.93
IRF3-228ENST00000601291 CYP7A1P22680 504 aa27.08■■□□□ 1.93
IRF3-228ENST00000601291 PRDX5P30044 214 aa27.08■■□□□ 1.93
IRF3-228ENST00000601291 GTF2IP78347 998 aa27.08■■□□□ 1.93
IRF3-228ENST00000601291 DZIP1Q86YF9 867 aaKnown RBP27.08■■□□□ 1.93
IRF3-228ENST00000601291 DBNDD1Q9H9R9 158 aa27.08■■□□□ 1.93
IRF3-228ENST00000601291 GPAA1O43292 621 aa27.07■■□□□ 1.92
IRF3-228ENST00000601291 ECE2O60344 883 aa27.07■■□□□ 1.92
IRF3-228ENST00000601291 MAP4K1Q92918 833 aa27.07■■□□□ 1.92
IRF3-228ENST00000601291 AIDAQ96BJ3 306 aa27.07■■□□□ 1.92
IRF3-228ENST00000601291 NSUN4Q96CB9 384 aaKnown RBP27.07■■□□□ 1.92
IRF3-228ENST00000601291 MECOMQ03112 1051 aa27.06■■□□□ 1.92
IRF3-228ENST00000601291 MFSD14BQ5SR56 506 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms