RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 SNAP23O00161 211 aa21.46■■□□□ 1.03
USE1-208ENST00000600970 PPP1R12BO60237 982 aaPredicted RBP21.46■■□□□ 1.03
USE1-208ENST00000600970 SLC4A2P04920 1241 aa21.46■■□□□ 1.03
USE1-208ENST00000600970 PPP2R3BQ9Y5P8 575 aa21.46■■□□□ 1.03
USE1-208ENST00000600970 HTTP42858 3142 aa21.45■■□□□ 1.02
USE1-208ENST00000600970 TWISTNBQ3B726 338 aaPredicted RBP21.45■■□□□ 1.02
USE1-208ENST00000600970 GCC1Q96CN9 775 aa21.45■■□□□ 1.02
USE1-208ENST00000600970 RBBP6Q7Z6E9 1792 aaKnown RBP21.45■■□□□ 1.02
USE1-208ENST00000600970 CLRN2A0PK11 232 aa21.44■■□□□ 1.02
USE1-208ENST00000600970 POTEFA5A3E0 1075 aa21.44■■□□□ 1.02
USE1-208ENST00000600970 TAF5LO75529 589 aa21.44■■□□□ 1.02
USE1-208ENST00000600970 CFAP100Q494V2 611 aa21.44■■□□□ 1.02
USE1-208ENST00000600970 INTS3Q68E01 1043 aaKnown RBP21.44■■□□□ 1.02
USE1-208ENST00000600970 C15orf52Q6ZUT6 534 aaKnown RBP21.44■■□□□ 1.02
USE1-208ENST00000600970 MYH16Q9H6N6 1097 aa21.44■■□□□ 1.02
USE1-208ENST00000600970 MKI67P46013 3256 aaKnown RBP21.44■■□□□ 1.02
USE1-208ENST00000600970 ANKRD18BA2A2Z9 1011 aa21.43■■□□□ 1.02
USE1-208ENST00000600970 UNCXA6NJT0 531 aa21.43■■□□□ 1.02
USE1-208ENST00000600970 F8W031 263 aaPredicted RBP21.43■■□□□ 1.02
USE1-208ENST00000600970 HELBQ8NG08 1087 aaPredicted RBP21.43■■□□□ 1.02
USE1-208ENST00000600970 PRMT6Q96LA8 375 aaPredicted RBP21.43■■□□□ 1.02
USE1-208ENST00000600970 CENPFP49454 3210 aa21.42■■□□□ 1.02
USE1-208ENST00000600970 SPDYE2BA6NHP3 402 aa21.42■■□□□ 1.02
USE1-208ENST00000600970 MYO1BO43795 1136 aa21.42■■□□□ 1.02
USE1-208ENST00000600970 SPDYE6P0CI01 402 aa21.42■■□□□ 1.02
USE1-208ENST00000600970 IL1R1P14778 569 aa21.42■■□□□ 1.02
USE1-208ENST00000600970 GJA5P36382 358 aa21.42■■□□□ 1.02
USE1-208ENST00000600970 AOX1Q06278 1338 aa21.42■■□□□ 1.02
USE1-208ENST00000600970 FLIIQ13045 1269 aa21.42■■□□□ 1.02
USE1-208ENST00000600970 SUPT20HL1Q3ZLR7 823 aa21.42■■□□□ 1.02
USE1-208ENST00000600970 NBPF12Q5TAG4 269 aaPredicted RBP21.42■■□□□ 1.02
USE1-208ENST00000600970 DNAAF4Q8WXU2 420 aa21.42■■□□□ 1.02
USE1-208ENST00000600970 ERO1AQ96HE7 468 aa21.42■■□□□ 1.02
USE1-208ENST00000600970 USP2O75604 605 aaPredicted RBP21.41■■□□□ 1.02
USE1-208ENST00000600970 FKBP1AP62942 108 aaKnown RBP21.41■■□□□ 1.02
USE1-208ENST00000600970 CRHR2Q13324 411 aa21.41■■□□□ 1.02
USE1-208ENST00000600970 LINS1Q8NG48 757 aa21.41■■□□□ 1.02
USE1-208ENST00000600970 CD99L2Q8TCZ2 262 aa21.41■■□□□ 1.02
USE1-208ENST00000600970 VEZTQ9HBM0 779 aa21.41■■□□□ 1.02
USE1-208ENST00000600970 PTPN22Q9Y2R2 807 aa21.41■■□□□ 1.02
USE1-208ENST00000600970 OTOFQ9HC10 1997 aa21.41■■□□□ 1.02
USE1-208ENST00000600970 CACNA1FO60840 1977 aa21.4■■□□□ 1.02
USE1-208ENST00000600970 FKBP5Q13451 457 aaPredicted RBP21.4■■□□□ 1.02
USE1-208ENST00000600970 OTUD7BQ6GQQ9 843 aa21.4■■□□□ 1.02
USE1-208ENST00000600970 ZNF804AQ7Z570 1209 aa21.4■■□□□ 1.02
USE1-208ENST00000600970 IREB2P48200 963 aaKnown RBP21.39■■□□□ 1.01
USE1-208ENST00000600970 FOXO4P98177 505 aa21.39■■□□□ 1.01
USE1-208ENST00000600970 PTPN18Q99952 460 aa21.39■■□□□ 1.01
USE1-208ENST00000600970 JAG2Q9Y219 1238 aa21.39■■□□□ 1.01
USE1-208ENST00000600970 BRCA2P51587 3418 aa21.39■■□□□ 1.01
USE1-208ENST00000600970 TESPA1A2RU30 521 aaPredicted RBP21.38■■□□□ 1.01
USE1-208ENST00000600970 CAP1Q01518 475 aa21.38■■□□□ 1.01
USE1-208ENST00000600970 IFIT5Q13325 482 aaKnown RBP21.38■■□□□ 1.01
USE1-208ENST00000600970 RASA3Q14644 834 aa21.38■■□□□ 1.01
USE1-208ENST00000600970 CCDC27Q2M243 656 aa21.38■■□□□ 1.01
USE1-208ENST00000600970 HABP4Q5JVS0 413 aaKnown RBP21.38■■□□□ 1.01
USE1-208ENST00000600970 WWC1Q8IX03 1113 aa21.38■■□□□ 1.01
USE1-208ENST00000600970 ANKRD13AQ8IZ07 590 aa21.38■■□□□ 1.01
USE1-208ENST00000600970 RBM5P52756 815 aaKnown RBP eCLIP21.37■■□□□ 1.01
USE1-208ENST00000600970 EFCC1Q9HA90 598 aa21.37■■□□□ 1.01
USE1-208ENST00000600970 CHMP3Q9Y3E7 222 aa21.37■■□□□ 1.01
USE1-208ENST00000600970 SP3Q02447 781 aa21.36■■□□□ 1.01
USE1-208ENST00000600970 ARMC5Q96C12 935 aa21.36■■□□□ 1.01
USE1-208ENST00000600970 EN2P19622 333 aaPredicted RBP21.35■■□□□ 1.01
USE1-208ENST00000600970 OPTNQ96CV9 577 aa21.35■■□□□ 1.01
USE1-208ENST00000600970 ELP3Q9H9T3 547 aa21.35■■□□□ 1.01
USE1-208ENST00000600970 IL16Q14005 1332 aa21.34■■□□□ 1.01
USE1-208ENST00000600970 PLIN1O60240 522 aa21.34■■□□□ 1.01
USE1-208ENST00000600970 ZNF70Q9UC06 446 aaPredicted RBP21.34■■□□□ 1.01
USE1-208ENST00000600970 FAM205AQ6ZU69 1335 aa21.33■■□□□ 1.01
USE1-208ENST00000600970 ARAP2Q8WZ64 1704 aa21.33■■□□□ 1.01
USE1-208ENST00000600970 SPDYE2Q495Y8 402 aa21.33■■□□□ 1.01
USE1-208ENST00000600970 LMBR1LQ6UX01 489 aa21.33■■□□□ 1.01
USE1-208ENST00000600970 ZNF594Q96JF6 807 aaPredicted RBP21.33■■□□□ 1.01
USE1-208ENST00000600970 MS4A4AQ96JQ5 239 aa21.33■■□□□ 1.01
USE1-208ENST00000600970 TNFAIP1Q13829 316 aa21.32■■□□□ 1
USE1-208ENST00000600970 EPHA10Q5JZY3 1008 aa21.32■■□□□ 1
USE1-208ENST00000600970 LDHAL6AQ6ZMR3 332 aa21.32■■□□□ 1
USE1-208ENST00000600970 TEPSINQ96N21 525 aa21.32■■□□□ 1
USE1-208ENST00000600970 TDRD3Q9H7E2 651 aaKnown RBP21.32■■□□□ 1
USE1-208ENST00000600970 F6X3S4 739 aa21.31■■□□□ 1
USE1-208ENST00000600970 VAMP4O75379 141 aa21.31■■□□□ 1
USE1-208ENST00000600970 CCDC57Q2TAC2 916 aa21.31■■□□□ 1
USE1-208ENST00000600970 CCDC184Q52MB2 194 aa21.31■■□□□ 1
USE1-208ENST00000600970 BEND3Q5T5X7 828 aa21.31■■□□□ 1
USE1-208ENST00000600970 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.31■■□□□ 1
USE1-208ENST00000600970 CDAN1Q8IWY9 1227 aa21.31■■□□□ 1
USE1-208ENST00000600970 TDRD7Q8NHU6 1098 aaKnown RBP21.31■■□□□ 1
USE1-208ENST00000600970 CNKSR2Q8WXI2 1034 aa21.31■■□□□ 1
USE1-208ENST00000600970 CNNM1Q9NRU3 951 aa21.31■■□□□ 1
USE1-208ENST00000600970 SERPINA10Q9UK55 444 aa21.31■■□□□ 1
USE1-208ENST00000600970 TTF2Q9UNY4 1162 aaKnown RBP21.31■■□□□ 1
USE1-208ENST00000600970 FANCIQ9NVI1 1328 aa21.3■■□□□ 1
USE1-208ENST00000600970 TAF7LQ5H9L4 462 aa21.3■■□□□ 1
USE1-208ENST00000600970 MFSD14BQ5SR56 506 aa21.3■■□□□ 1
USE1-208ENST00000600970 BRI3BPQ8WY22 251 aa21.3■■□□□ 1
USE1-208ENST00000600970 ZNF333Q96JL9 665 aa21.3■■□□□ 1
USE1-208ENST00000600970 DZIP1LQ8IYY4 767 aaKnown RBP21.29■■□□□ 1
USE1-208ENST00000600970 TMEM106CQ9BVX2 250 aa21.29■■□□□ 1
USE1-208ENST00000600970 TCP10L2B9ZVM9 353 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms