RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 IRS2Q9Y4H2 1338 aa13□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 NEURL1BA8MQ27 555 aa13□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 DACT2Q5SW24 774 aa13□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 CCDC30Q5VVM6 783 aa13□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 SULF1Q8IWU6 871 aa13□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 USP17L3A6NCW0 530 aa12.99□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 USP17L4A6NCW7 530 aa12.99□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 H7C1W4 665 aa12.99□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 SNAP23O00161 211 aa12.99□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 ATP2B4P23634 1241 aa12.99□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 CCT4P50991 539 aaKnown RBP12.99□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 USP17L1Q7RTZ2 530 aa12.99□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 STAP2Q9UGK3 403 aa12.99□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 OTOFQ9HC10 1997 aa12.99□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 SSC5DA1L4H1 1573 aa12.98□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 USP17L8P0C7I0 530 aa12.98□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 UBE3BQ7Z3V4 1068 aa12.98□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 PODNQ7Z5L7 613 aa12.98□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 WWC1Q8IX03 1113 aa12.98□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 GUCD1Q96NT3 240 aa12.98□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 HTATIP2Q9BUP3 242 aa12.98□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 BSDC1Q9NW68 430 aaPredicted RBP12.98□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 ARAP2Q8WZ64 1704 aa12.97□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 AOX1Q06278 1338 aa12.97□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 WNT10BO00744 389 aa12.97□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 SASH1O94885 1247 aa12.97□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 DDX58O95786 925 aaKnown RBP12.97□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 CALD1Q05682 793 aaKnown RBP12.97□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 TWISTNBQ3B726 338 aaPredicted RBP12.97□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 SHISA4Q96DD7 197 aa12.97□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 FZD1Q9UP38 647 aa12.97□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 PCDHAC2Q9Y5I4 1007 aa12.97□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 G3V3G9 751 aa12.96□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 UBE2Q2LH0YL09 131 aa12.96□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 MYCP01106 439 aaPredicted RBP12.96□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 SREBF2Q12772 1141 aa12.96□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 GCKRQ14397 625 aa12.96□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 LRIT3Q3SXY7 679 aa12.96□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 SLC9C1Q4G0N8 1177 aa12.96□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 DCAF8Q5TAQ9 597 aa12.96□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 CD99L2Q8TCZ2 262 aa12.96□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 ERO1AQ96HE7 468 aa12.96□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 ZBED3Q96IU2 234 aaPredicted RBP12.96□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 CDC5LQ99459 802 aaKnown RBP12.96□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 PLA2G12BQ9BX93 195 aa12.96□□□□□ -0.33
MIA-RAB4B-201ENST00000600729 FANCIQ9NVI1 1328 aa12.95□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 PKD1L2Q7Z442 2459 aa12.95□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 SLC4A2P04920 1241 aa12.95□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 CSF1RP07333 972 aa12.95□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 HSP90B1P14625 803 aaKnown RBP12.95□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 ITGA6P23229 1130 aa12.95□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 FLIIQ13045 1269 aa12.95□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 CCDC27Q2M243 656 aa12.95□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 NBPF11Q86T75 865 aa12.95□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 CERS5Q8N5B7 392 aa12.95□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 EFCC1Q9HA90 598 aa12.95□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 SPINK5Q9NQ38 1064 aaPredicted RBP12.95□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 ARIH1Q9Y4X5 557 aaPredicted RBP12.95□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 STRIP1Q5VSL9 837 aa12.94□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 FBXW7Q969H0 707 aa12.94□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 ZNF804BA4D1E1 1349 aa12.93□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 BCAMP50895 628 aa12.93□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 FKBP1BP68106 108 aa12.93□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 FOXO4P98177 505 aa12.93□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 CHRNDQ07001 517 aa12.93□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 MKRN3Q13064 507 aaKnown RBP12.93□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 EPHA10Q5JZY3 1008 aa12.93□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 UBE2Q1Q7Z7E8 422 aa12.93□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 KIAA0825Q8IV33 1275 aa12.93□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 COA1Q9GZY4 146 aa12.93□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 F6X3S4 739 aa12.92□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 VAMP4O75379 141 aa12.92□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 TAF5LO75529 589 aa12.92□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 BMP8BP34820 402 aa12.92□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 GTF2IP78347 998 aa12.92□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 CAP1Q01518 475 aa12.92□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 PTPN12Q05209 780 aaKnown RBP12.92□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 NEXNQ0ZGT2 675 aa12.92□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 HELBQ8NG08 1087 aaPredicted RBP12.92□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 DNAAF4Q8WXU2 420 aa12.92□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 STK31Q9BXU1 1019 aa12.92□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 LEMD3Q9Y2U8 911 aa12.92□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 IL16Q14005 1332 aa12.91□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 ALDH1A1P00352 501 aa12.91□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 PRKG1Q13976 671 aa12.91□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 ALYREFQ86V81 257 aaKnown RBP12.91□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 GDF15Q99988 308 aa12.91□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 CD209Q9NNX6 404 aa12.91□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 PTCH2Q9Y6C5 1203 aa12.91□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 MYO3BQ8WXR4 1341 aa12.9□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 ZDBF2Q9HCK1 2354 aa12.9□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 IGHMBP2P38935 993 aaKnown RBP12.9□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 EXOSC9Q06265 439 aaKnown RBP12.9□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 FKBP5Q13451 457 aaPredicted RBP12.9□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 TTLL5Q6EMB2 1281 aa12.9□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 LINS1Q8NG48 757 aa12.9□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 MAFAQ8NHW3 353 aaPredicted RBP12.9□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 ZNF594Q96JF6 807 aaPredicted RBP12.9□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 JAG2Q9Y219 1238 aa12.9□□□□□ -0.34
MIA-RAB4B-201ENST00000600729 SALL2Q9Y467 1007 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms