RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 TNNI3KQ59H18 835 aa17.02■□□□□ 0.32
SNRPA-208ENST00000600456 SMC1BQ8NDV3 1235 aa17.02■□□□□ 0.32
SNRPA-208ENST00000600456 XAGE2Q96GT9 111 aa17.02■□□□□ 0.32
SNRPA-208ENST00000600456 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.02■□□□□ 0.32
SNRPA-208ENST00000600456 FPGT-TNNI3KV9GXZ4 949 aa17.02■□□□□ 0.32
SNRPA-208ENST00000600456 ADORA1P30542 326 aa17.01■□□□□ 0.31
SNRPA-208ENST00000600456 EAPPQ56P03 285 aaPredicted RBP17.01■□□□□ 0.31
SNRPA-208ENST00000600456 CCDC102BQ68D86 513 aa17.01■□□□□ 0.31
SNRPA-208ENST00000600456 CHADLQ6NUI6 762 aa17.01■□□□□ 0.31
SNRPA-208ENST00000600456 OGFOD1Q8N543 542 aa17.01■□□□□ 0.31
SNRPA-208ENST00000600456 TBC1D22AQ8WUA7 517 aa17.01■□□□□ 0.31
SNRPA-208ENST00000600456 KIF1BPQ96EK5 621 aa17.01■□□□□ 0.31
SNRPA-208ENST00000600456 NEUROD6Q96NK8 337 aa17.01■□□□□ 0.31
SNRPA-208ENST00000600456 ZNF646O15015 1829 aaPredicted RBP17■□□□□ 0.31
SNRPA-208ENST00000600456 C1QTNF8P60827 252 aa17■□□□□ 0.31
SNRPA-208ENST00000600456 GORABQ5T7V8 394 aa17■□□□□ 0.31
SNRPA-208ENST00000600456 CERS5Q8N5B7 392 aa17■□□□□ 0.31
SNRPA-208ENST00000600456 RHPN1Q8TCX5 695 aa17■□□□□ 0.31
SNRPA-208ENST00000600456 ZC3H15Q8WU90 426 aaKnown RBP17■□□□□ 0.31
SNRPA-208ENST00000600456 MXD3Q9BW11 206 aa17■□□□□ 0.31
SNRPA-208ENST00000600456 HDAC9Q9UKV0 1011 aa17■□□□□ 0.31
SNRPA-208ENST00000600456 IQSEC3Q9UPP2 1182 aaPredicted RBP17■□□□□ 0.31
SNRPA-208ENST00000600456 PCDHB15Q9Y5E8 787 aa17■□□□□ 0.31
SNRPA-208ENST00000600456 PDS5AQ29RF7 1337 aaKnown RBP16.99■□□□□ 0.31
SNRPA-208ENST00000600456 SHTN1A0MZ66 631 aa16.99■□□□□ 0.31
SNRPA-208ENST00000600456 PHKA1P46020 1223 aa16.99■□□□□ 0.31
SNRPA-208ENST00000600456 MFSD14BQ5SR56 506 aa16.99■□□□□ 0.31
SNRPA-208ENST00000600456 WDR66Q8TBY9 1149 aa16.99■□□□□ 0.31
SNRPA-208ENST00000600456 DENND2AQ9ULE3 1009 aa16.99■□□□□ 0.31
SNRPA-208ENST00000600456 ADAMTSL1Q8N6G6 1762 aa16.99■□□□□ 0.31
SNRPA-208ENST00000600456 POTEIP0CG38 1075 aa16.98■□□□□ 0.31
SNRPA-208ENST00000600456 POTEJP0CG39 1038 aa16.98■□□□□ 0.31
SNRPA-208ENST00000600456 CHAF1AQ13111 956 aaPredicted RBP16.98■□□□□ 0.31
SNRPA-208ENST00000600456 KIF4BQ2VIQ3 1234 aa16.98■□□□□ 0.31
SNRPA-208ENST00000600456 KIAA0825Q8IV33 1275 aa16.98■□□□□ 0.31
SNRPA-208ENST00000600456 CLASRPQ8N2M8 674 aaKnown RBP16.98■□□□□ 0.31
SNRPA-208ENST00000600456 TRPM4Q8TD43 1214 aa16.98■□□□□ 0.31
SNRPA-208ENST00000600456 DCTPP1Q9H773 170 aa16.98■□□□□ 0.31
SNRPA-208ENST00000600456 MYOZ2Q9NPC6 264 aa16.98■□□□□ 0.31
SNRPA-208ENST00000600456 JAG2Q9Y219 1238 aa16.98■□□□□ 0.31
SNRPA-208ENST00000600456 CLEC11AQ9Y240 323 aa16.98■□□□□ 0.31
SNRPA-208ENST00000600456 SUGT1Q9Y2Z0 365 aa16.98■□□□□ 0.31
SNRPA-208ENST00000600456 UQCRFS1P1P0C7P4 283 aa16.97■□□□□ 0.31
SNRPA-208ENST00000600456 HIRAP54198 1017 aaPredicted RBP16.97■□□□□ 0.31
SNRPA-208ENST00000600456 TBC1D10BQ4KMP7 808 aaPredicted RBP16.97■□□□□ 0.31
SNRPA-208ENST00000600456 SAMD7Q7Z3H4 446 aa16.97■□□□□ 0.31
SNRPA-208ENST00000600456 EAF2Q96CJ1 260 aaPredicted RBP16.97■□□□□ 0.31
SNRPA-208ENST00000600456 PGAP2Q9UHJ9 254 aa16.97■□□□□ 0.31
SNRPA-208ENST00000600456 SALL1Q9NSC2 1324 aa16.96■□□□□ 0.31
SNRPA-208ENST00000600456 ARID4AP29374 1257 aaPredicted RBP16.96■□□□□ 0.31
SNRPA-208ENST00000600456 HDAC1Q13547 482 aaPredicted RBP16.96■□□□□ 0.31
SNRPA-208ENST00000600456 RASGRF1Q13972 1273 aa16.96■□□□□ 0.31
SNRPA-208ENST00000600456 CCDC158Q5M9N0 1113 aa16.96■□□□□ 0.31
SNRPA-208ENST00000600456 AACSQ86V21 672 aa16.96■□□□□ 0.31
SNRPA-208ENST00000600456 EXOC6Q8TAG9 804 aa16.96■□□□□ 0.31
SNRPA-208ENST00000600456 ZNF512BQ96KM6 892 aaPredicted RBP16.96■□□□□ 0.31
SNRPA-208ENST00000600456 DBNDD2Q9BQY9 259 aa16.96■□□□□ 0.31
SNRPA-208ENST00000600456 LRRCC1Q9C099 1032 aa16.96■□□□□ 0.31
SNRPA-208ENST00000600456 DBNLQ9UJU6 430 aaKnown RBP16.96■□□□□ 0.31
SNRPA-208ENST00000600456 COL1A1P02452 1464 aaPredicted RBP16.96■□□□□ 0.31
SNRPA-208ENST00000600456 APBB1O00213 710 aa16.95■□□□□ 0.3
SNRPA-208ENST00000600456 EGFRP00533 1210 aa16.95■□□□□ 0.3
SNRPA-208ENST00000600456 RBM26Q5T8P6 1007 aaKnown RBP16.95■□□□□ 0.3
SNRPA-208ENST00000600456 ZGPATQ8N5A5 531 aaKnown RBP16.95■□□□□ 0.3
SNRPA-208ENST00000600456 IL1RAPL2Q9NP60 686 aa16.95■□□□□ 0.3
SNRPA-208ENST00000600456 MAST3O60307 1309 aa16.95■□□□□ 0.3
SNRPA-208ENST00000600456 HDLBPQ00341 1268 aaKnown RBP16.94■□□□□ 0.3
SNRPA-208ENST00000600456 TTC39AQ5SRH9 613 aa16.94■□□□□ 0.3
SNRPA-208ENST00000600456 MTMR14Q8NCE2 650 aa16.94■□□□□ 0.3
SNRPA-208ENST00000600456 CCDC8Q9H0W5 538 aaPredicted RBP16.94■□□□□ 0.3
SNRPA-208ENST00000600456 SERPINA10Q9UK55 444 aa16.94■□□□□ 0.3
SNRPA-208ENST00000600456 TTF2Q9UNY4 1162 aaKnown RBP16.94■□□□□ 0.3
SNRPA-208ENST00000600456 F8W031 263 aaPredicted RBP16.93■□□□□ 0.3
SNRPA-208ENST00000600456 IFIT2P09913 472 aaKnown RBP16.93■□□□□ 0.3
SNRPA-208ENST00000600456 DLGAP5Q15398 846 aa16.93■□□□□ 0.3
SNRPA-208ENST00000600456 MAP1SQ66K74 1059 aaPredicted RBP16.93■□□□□ 0.3
SNRPA-208ENST00000600456 CNTROBQ8N137 903 aa16.93■□□□□ 0.3
SNRPA-208ENST00000600456 SPATA5Q8NB90 893 aa16.93■□□□□ 0.3
SNRPA-208ENST00000600456 MRIQ9BWK5 157 aa16.93■□□□□ 0.3
SNRPA-208ENST00000600456 TLR7Q9NYK1 1049 aaKnown RBP16.93■□□□□ 0.3
SNRPA-208ENST00000600456 HMG20BQ9P0W2 317 aa16.93■□□□□ 0.3
SNRPA-208ENST00000600456 ITGBL1O95965 494 aaPredicted RBP16.92■□□□□ 0.3
SNRPA-208ENST00000600456 SCARF1Q14162 830 aa16.92■□□□□ 0.3
SNRPA-208ENST00000600456 ZBED3Q96IU2 234 aaPredicted RBP16.92■□□□□ 0.3
SNRPA-208ENST00000600456 PITPNM2Q9BZ72 1349 aa16.92■□□□□ 0.3
SNRPA-208ENST00000600456 WNT10BO00744 389 aa16.91■□□□□ 0.3
SNRPA-208ENST00000600456 LDHBP07195 334 aaKnown RBP16.91■□□□□ 0.3
SNRPA-208ENST00000600456 GRIK5Q16478 980 aa16.91■□□□□ 0.3
SNRPA-208ENST00000600456 CFAP100Q494V2 611 aa16.91■□□□□ 0.3
SNRPA-208ENST00000600456 SPTY2D1Q68D10 685 aaPredicted RBP16.91■□□□□ 0.3
SNRPA-208ENST00000600456 CDC37L1Q7L3B6 337 aa16.91■□□□□ 0.3
SNRPA-208ENST00000600456 DCPSQ96C86 337 aaKnown RBP16.91■□□□□ 0.3
SNRPA-208ENST00000600456 GCC1Q96CN9 775 aa16.91■□□□□ 0.3
SNRPA-208ENST00000600456 RWDD1Q9H446 243 aaPredicted RBP16.91■□□□□ 0.3
SNRPA-208ENST00000600456 GGA3Q9NZ52 723 aa16.91■□□□□ 0.3
SNRPA-208ENST00000600456 MYH13Q9UKX3 1938 aa16.9■□□□□ 0.3
SNRPA-208ENST00000600456 SPDYE2BA6NHP3 402 aa16.9■□□□□ 0.3
SNRPA-208ENST00000600456 MYO1BO43795 1136 aa16.9■□□□□ 0.3
SNRPA-208ENST00000600456 IGSF3O75054 1194 aa16.9■□□□□ 0.3
SNRPA-208ENST00000600456 SPDYE6P0CI01 402 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms