RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 COL18A1P39060 1754 aa13.53□□□□□ -0.24
ARHGEF1-220ENST00000600274 PDE8AO60658 829 aa13.53□□□□□ -0.24
ARHGEF1-220ENST00000600274 TPM2P07951 284 aa13.53□□□□□ -0.24
ARHGEF1-220ENST00000600274 SASS6Q6UVJ0 657 aa13.53□□□□□ -0.24
ARHGEF1-220ENST00000600274 GPR108Q9NPR9 543 aa13.53□□□□□ -0.24
ARHGEF1-220ENST00000600274 TUBGCP6Q96RT7 1819 aa13.53□□□□□ -0.24
ARHGEF1-220ENST00000600274 ATP2B1P20020 1258 aa13.52□□□□□ -0.24
ARHGEF1-220ENST00000600274 BCAMP50895 628 aa13.52□□□□□ -0.24
ARHGEF1-220ENST00000600274 ANO6Q4KMQ2 910 aa13.52□□□□□ -0.24
ARHGEF1-220ENST00000600274 ARMT1Q9H993 441 aa13.52□□□□□ -0.24
ARHGEF1-220ENST00000600274 LRP2BPQ9P2M1 347 aa13.52□□□□□ -0.24
ARHGEF1-220ENST00000600274 ORC3Q9UBD5 711 aaPredicted RBP13.52□□□□□ -0.24
ARHGEF1-220ENST00000600274 RIPOR2Q9Y4F9 1068 aa13.52□□□□□ -0.24
ARHGEF1-220ENST00000600274 WTIPA6NIX2 430 aaPredicted RBP13.52□□□□□ -0.25
ARHGEF1-220ENST00000600274 PDE8BO95263 885 aa13.52□□□□□ -0.25
ARHGEF1-220ENST00000600274 CTDSPL2Q05D32 466 aa13.52□□□□□ -0.25
ARHGEF1-220ENST00000600274 AIFM3Q96NN9 605 aa13.52□□□□□ -0.25
ARHGEF1-220ENST00000600274 DNAJC25Q9H1X3 360 aa13.52□□□□□ -0.25
ARHGEF1-220ENST00000600274 KIF3AQ9Y496 699 aa13.52□□□□□ -0.25
ARHGEF1-220ENST00000600274 GOLGB1Q14789 3259 aaKnown RBP13.52□□□□□ -0.25
ARHGEF1-220ENST00000600274 SIPA1L3O60292 1781 aaPredicted RBP13.52□□□□□ -0.25
ARHGEF1-220ENST00000600274 CTDNEP1O95476 244 aa13.52□□□□□ -0.25
ARHGEF1-220ENST00000600274 VPS37DQ86XT2 251 aa13.52□□□□□ -0.25
ARHGEF1-220ENST00000600274 TMEM87AQ8NBN3 555 aa13.52□□□□□ -0.25
ARHGEF1-220ENST00000600274 C8orf37Q96NL8 207 aa13.52□□□□□ -0.25
ARHGEF1-220ENST00000600274 USP28Q96RU2 1077 aa13.52□□□□□ -0.25
ARHGEF1-220ENST00000600274 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.52□□□□□ -0.25
ARHGEF1-220ENST00000600274 PFKFB2O60825 505 aa13.51□□□□□ -0.25
ARHGEF1-220ENST00000600274 MCM5P33992 734 aa13.51□□□□□ -0.25
ARHGEF1-220ENST00000600274 TYRO3Q06418 890 aa13.51□□□□□ -0.25
ARHGEF1-220ENST00000600274 KIAA2012Q0VF49 1180 aa13.51□□□□□ -0.25
ARHGEF1-220ENST00000600274 NCOA7Q8NI08 942 aa13.51□□□□□ -0.25
ARHGEF1-220ENST00000600274 PHKBQ93100 1093 aa13.51□□□□□ -0.25
ARHGEF1-220ENST00000600274 PGBD1Q96JS3 809 aa13.51□□□□□ -0.25
ARHGEF1-220ENST00000600274 C8orf76Q96K31 380 aa13.51□□□□□ -0.25
ARHGEF1-220ENST00000600274 LOC102724428A0A0B4J2F2 783 aa13.51□□□□□ -0.25
ARHGEF1-220ENST00000600274 MINDY4BA8MYZ0 360 aa13.51□□□□□ -0.25
ARHGEF1-220ENST00000600274 LETM1O95202 739 aaPredicted RBP13.51□□□□□ -0.25
ARHGEF1-220ENST00000600274 MBD4O95243 580 aa13.51□□□□□ -0.25
ARHGEF1-220ENST00000600274 ADD1P35611 737 aaKnown RBP13.51□□□□□ -0.25
ARHGEF1-220ENST00000600274 TDO2P48775 406 aa13.51□□□□□ -0.25
ARHGEF1-220ENST00000600274 SIK1P57059 783 aa13.51□□□□□ -0.25
ARHGEF1-220ENST00000600274 ISM2Q6H9L7 571 aa13.51□□□□□ -0.25
ARHGEF1-220ENST00000600274 CCAR1Q8IX12 1150 aaKnown RBP13.51□□□□□ -0.25
ARHGEF1-220ENST00000600274 TSGA10IPQ3SY00 556 aa13.51□□□□□ -0.25
ARHGEF1-220ENST00000600274 CCDC73Q6ZRK6 1079 aa13.51□□□□□ -0.25
ARHGEF1-220ENST00000600274 UTP14AQ9BVJ6 771 aaKnown RBP13.51□□□□□ -0.25
ARHGEF1-220ENST00000600274 NAPBQ9H115 298 aa13.51□□□□□ -0.25
ARHGEF1-220ENST00000600274 CCDC87Q9NVE4 849 aa13.51□□□□□ -0.25
ARHGEF1-220ENST00000600274 ZKSCAN5Q9Y2L8 839 aa13.51□□□□□ -0.25
ARHGEF1-220ENST00000600274 N4BP2Q86UW6 1770 aaPredicted RBP13.5□□□□□ -0.25
ARHGEF1-220ENST00000600274 MRC1P22897 1456 aa13.5□□□□□ -0.25
ARHGEF1-220ENST00000600274 PRKAB2O43741 272 aa13.5□□□□□ -0.25
ARHGEF1-220ENST00000600274 CSF1RP07333 972 aa13.5□□□□□ -0.25
ARHGEF1-220ENST00000600274 IGHMBP2P38935 993 aaKnown RBP13.5□□□□□ -0.25
ARHGEF1-220ENST00000600274 RESTQ13127 1097 aa13.5□□□□□ -0.25
ARHGEF1-220ENST00000600274 TRIM5Q9C035 493 aa13.5□□□□□ -0.25
ARHGEF1-220ENST00000600274 CFAP45Q9UL16 551 aa13.5□□□□□ -0.25
ARHGEF1-220ENST00000600274 KCPQ6ZWJ8 1503 aa13.5□□□□□ -0.25
ARHGEF1-220ENST00000600274 ZFYP08048 801 aaPredicted RBP13.5□□□□□ -0.25
ARHGEF1-220ENST00000600274 PDE6AP16499 860 aa13.5□□□□□ -0.25
ARHGEF1-220ENST00000600274 STK38Q15208 465 aa13.5□□□□□ -0.25
ARHGEF1-220ENST00000600274 CMTR1Q8N1G2 835 aaKnown RBP13.5□□□□□ -0.25
ARHGEF1-220ENST00000600274 SDF4Q9BRK5 362 aa13.5□□□□□ -0.25
ARHGEF1-220ENST00000600274 SENP2Q9HC62 589 aa13.5□□□□□ -0.25
ARHGEF1-220ENST00000600274 RAI14Q9P0K7 980 aa13.5□□□□□ -0.25
ARHGEF1-220ENST00000600274 PALLDQ8WX93 1383 aa13.5□□□□□ -0.25
ARHGEF1-220ENST00000600274 ARFGEF2Q9Y6D5 1785 aa13.5□□□□□ -0.25
ARHGEF1-220ENST00000600274 SLC5A1P13866 664 aa13.49□□□□□ -0.25
ARHGEF1-220ENST00000600274 ZRSR1Q15695 479 aaKnown RBP13.49□□□□□ -0.25
ARHGEF1-220ENST00000600274 FSIP1Q8NA03 581 aa13.49□□□□□ -0.25
ARHGEF1-220ENST00000600274 NKX2-3Q8TAU0 364 aa13.49□□□□□ -0.25
ARHGEF1-220ENST00000600274 A0A1B0GVL5 298 aa13.49□□□□□ -0.25
ARHGEF1-220ENST00000600274 BIN1O00499 593 aa13.49□□□□□ -0.25
ARHGEF1-220ENST00000600274 HMGN5P82970 282 aaKnown RBP13.49□□□□□ -0.25
ARHGEF1-220ENST00000600274 ITPK1Q13572 414 aa13.49□□□□□ -0.25
ARHGEF1-220ENST00000600274 MARCH10Q8NA82 808 aaPredicted RBP13.49□□□□□ -0.25
ARHGEF1-220ENST00000600274 NUP133Q8WUM0 1156 aa13.49□□□□□ -0.25
ARHGEF1-220ENST00000600274 PDLIM2Q96JY6 352 aa13.49□□□□□ -0.25
ARHGEF1-220ENST00000600274 NOL7Q9UMY1 257 aaKnown RBP13.49□□□□□ -0.25
ARHGEF1-220ENST00000600274 MARCKSP29966 332 aaPredicted RBP13.49□□□□□ -0.25
ARHGEF1-220ENST00000600274 EXOSC10Q01780 885 aaKnown RBP13.49□□□□□ -0.25
ARHGEF1-220ENST00000600274 TRIM28Q13263 835 aaKnown RBP13.49□□□□□ -0.25
ARHGEF1-220ENST00000600274 RASGRF1Q13972 1273 aa13.49□□□□□ -0.25
ARHGEF1-220ENST00000600274 TBC1D10CQ8IV04 446 aa13.49□□□□□ -0.25
ARHGEF1-220ENST00000600274 NGLY1Q96IV0 654 aa13.49□□□□□ -0.25
ARHGEF1-220ENST00000600274 KINO60870 393 aaKnown RBP13.48□□□□□ -0.25
ARHGEF1-220ENST00000600274 PUM3Q15397 648 aaKnown RBP13.48□□□□□ -0.25
ARHGEF1-220ENST00000600274 PIBF1Q8WXW3 757 aa13.48□□□□□ -0.25
ARHGEF1-220ENST00000600274 UBE2Q2LH0YL09 131 aa13.48□□□□□ -0.25
ARHGEF1-220ENST00000600274 IL6STP40189 918 aaPredicted RBP13.48□□□□□ -0.25
ARHGEF1-220ENST00000600274 GYG1P46976 350 aa13.48□□□□□ -0.25
ARHGEF1-220ENST00000600274 ZSCAN25Q6NSZ9 544 aa13.48□□□□□ -0.25
ARHGEF1-220ENST00000600274 SYNE3Q6ZMZ3 975 aa13.48□□□□□ -0.25
ARHGEF1-220ENST00000600274 SPATA5Q8NB90 893 aa13.48□□□□□ -0.25
ARHGEF1-220ENST00000600274 ADD2P35612 726 aa13.48□□□□□ -0.25
ARHGEF1-220ENST00000600274 MAP3K12Q12852 859 aa13.48□□□□□ -0.25
ARHGEF1-220ENST00000600274 CHAF1AQ13111 956 aaPredicted RBP13.48□□□□□ -0.25
ARHGEF1-220ENST00000600274 IFIT3O14879 490 aaKnown RBP13.47□□□□□ -0.25
ARHGEF1-220ENST00000600274 FOXP2O15409 715 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms