RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 FAM43AQ8N2R8 423 aa22.93■■□□□ 1.26
SSBP4-207ENST00000600244 NKX2-3Q8TAU0 364 aa22.93■■□□□ 1.26
SSBP4-207ENST00000600244 PNNQ9H307 717 aaKnown RBP22.93■■□□□ 1.26
SSBP4-207ENST00000600244 ELP3Q9H9T3 547 aa22.93■■□□□ 1.26
SSBP4-207ENST00000600244 HYPKQ9NX55 129 aa22.93■■□□□ 1.26
SSBP4-207ENST00000600244 PCDHAC2Q9Y5I4 1007 aa22.93■■□□□ 1.26
SSBP4-207ENST00000600244 GNRH1P01148 92 aa22.92■■□□□ 1.26
SSBP4-207ENST00000600244 GJA8P48165 433 aa22.92■■□□□ 1.26
SSBP4-207ENST00000600244 PRMT2P55345 433 aa22.92■■□□□ 1.26
SSBP4-207ENST00000600244 GTF2IP78347 998 aa22.92■■□□□ 1.26
SSBP4-207ENST00000600244 LACTBP83111 547 aaPredicted RBP22.92■■□□□ 1.26
SSBP4-207ENST00000600244 JARID2Q92833 1246 aaPredicted RBP22.92■■□□□ 1.26
SSBP4-207ENST00000600244 CCDC191Q8NCU4 936 aa22.91■■□□□ 1.26
SSBP4-207ENST00000600244 CDC5LQ99459 802 aaKnown RBP22.91■■□□□ 1.26
SSBP4-207ENST00000600244 LEMD3Q9Y2U8 911 aa22.91■■□□□ 1.26
SSBP4-207ENST00000600244 ZSWIM8A7E2V4 1837 aa22.9■■□□□ 1.26
SSBP4-207ENST00000600244 CCL15-CCL14A0A0B4J2E2 113 aa22.9■■□□□ 1.26
SSBP4-207ENST00000600244 TLR2O60603 784 aa22.9■■□□□ 1.26
SSBP4-207ENST00000600244 GJB1P08034 283 aa22.9■■□□□ 1.26
SSBP4-207ENST00000600244 HOXB7P09629 217 aa22.9■■□□□ 1.26
SSBP4-207ENST00000600244 CCL15Q16663 113 aa22.9■■□□□ 1.26
SSBP4-207ENST00000600244 CNKSR2Q8WXI2 1034 aa22.9■■□□□ 1.26
SSBP4-207ENST00000600244 PRMT6Q96LA8 375 aaPredicted RBP22.9■■□□□ 1.26
SSBP4-207ENST00000600244 COL25A1Q9BXS0 654 aaPredicted RBP22.9■■□□□ 1.26
SSBP4-207ENST00000600244 CLRN2A0PK11 232 aa22.89■■□□□ 1.25
SSBP4-207ENST00000600244 GTF2A2P52657 109 aa22.89■■□□□ 1.25
SSBP4-207ENST00000600244 KIF22Q14807 665 aa22.89■■□□□ 1.25
SSBP4-207ENST00000600244 GPR153Q6NV75 609 aa22.89■■□□□ 1.25
SSBP4-207ENST00000600244 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.89■■□□□ 1.25
SSBP4-207ENST00000600244 RIC3Q7Z5B4 369 aa22.89■■□□□ 1.25
SSBP4-207ENST00000600244 CERS5Q8N5B7 392 aa22.89■■□□□ 1.25
SSBP4-207ENST00000600244 AOX1Q06278 1338 aa22.88■■□□□ 1.25
SSBP4-207ENST00000600244 SPDYE2BA6NHP3 402 aa22.88■■□□□ 1.25
SSBP4-207ENST00000600244 SPDYE6P0CI01 402 aa22.88■■□□□ 1.25
SSBP4-207ENST00000600244 KLRK1P26718 216 aa22.88■■□□□ 1.25
SSBP4-207ENST00000600244 RASA3Q14644 834 aa22.88■■□□□ 1.25
SSBP4-207ENST00000600244 ECM29Q5VYK3 1845 aa22.87■■□□□ 1.25
SSBP4-207ENST00000600244 TTLL11Q8NHH1 800 aa22.87■■□□□ 1.25
SSBP4-207ENST00000600244 MYD88Q99836 296 aa22.87■■□□□ 1.25
SSBP4-207ENST00000600244 STXBP5LQ9Y2K9 1186 aa22.87■■□□□ 1.25
SSBP4-207ENST00000600244 OTOFQ9HC10 1997 aa22.87■■□□□ 1.25
SSBP4-207ENST00000600244 MYO1BO43795 1136 aa22.86■■□□□ 1.25
SSBP4-207ENST00000600244 CTSWP56202 376 aa22.86■■□□□ 1.25
SSBP4-207ENST00000600244 CFAP100Q494V2 611 aa22.86■■□□□ 1.25
SSBP4-207ENST00000600244 VEZTQ9HBM0 779 aa22.86■■□□□ 1.25
SSBP4-207ENST00000600244 CWC25Q9NXE8 425 aaPredicted RBP22.86■■□□□ 1.25
SSBP4-207ENST00000600244 STAP2Q9UGK3 403 aa22.86■■□□□ 1.25
SSBP4-207ENST00000600244 CCL5P13501 91 aa22.85■■□□□ 1.25
SSBP4-207ENST00000600244 CTGFP29279 349 aa22.85■■□□□ 1.25
SSBP4-207ENST00000600244 TMPOP42166 694 aaKnown RBP22.85■■□□□ 1.25
SSBP4-207ENST00000600244 GREM2Q9H772 168 aa22.85■■□□□ 1.25
SSBP4-207ENST00000600244 ZCCHC17Q9NP64 241 aaKnown RBP22.85■■□□□ 1.25
SSBP4-207ENST00000600244 GRK4P32298 578 aa22.84■■□□□ 1.25
SSBP4-207ENST00000600244 GOLGA2Q08379 1002 aa22.84■■□□□ 1.25
SSBP4-207ENST00000600244 LMOD3Q0VAK6 560 aa22.84■■□□□ 1.25
SSBP4-207ENST00000600244 CD209Q9NNX6 404 aa22.84■■□□□ 1.25
SSBP4-207ENST00000600244 SRRDQ9UH36 339 aa22.84■■□□□ 1.25
SSBP4-207ENST00000600244 WDHD1O75717 1129 aaPredicted RBP22.83■■□□□ 1.25
SSBP4-207ENST00000600244 VGLL4Q14135 290 aa22.83■■□□□ 1.25
SSBP4-207ENST00000600244 DEFB123Q8N688 67 aa22.83■■□□□ 1.25
SSBP4-207ENST00000600244 FARP2O94887 1054 aaPredicted RBP22.82■■□□□ 1.24
SSBP4-207ENST00000600244 MAP3K9P80192 1104 aa22.82■■□□□ 1.24
SSBP4-207ENST00000600244 C17orf99Q6UX52 265 aa22.82■■□□□ 1.24
SSBP4-207ENST00000600244 TEPSINQ96N21 525 aa22.82■■□□□ 1.24
SSBP4-207ENST00000600244 RNF208Q9H0X6 261 aa22.82■■□□□ 1.24
SSBP4-207ENST00000600244 PHAXQ9H814 394 aaKnown RBP22.82■■□□□ 1.24
SSBP4-207ENST00000600244 RIPOR2Q9Y4F9 1068 aa22.82■■□□□ 1.24
SSBP4-207ENST00000600244 EVI5O60447 810 aa22.81■■□□□ 1.24
SSBP4-207ENST00000600244 TRIM47Q96LD4 638 aa22.81■■□□□ 1.24
SSBP4-207ENST00000600244 UNC80Q8N2C7 3258 aa22.81■■□□□ 1.24
SSBP4-207ENST00000600244 BTBD19C9JJ37 291 aa22.8■■□□□ 1.24
SSBP4-207ENST00000600244 F8W031 263 aaPredicted RBP22.8■■□□□ 1.24
SSBP4-207ENST00000600244 OSBPP22059 807 aa22.8■■□□□ 1.24
SSBP4-207ENST00000600244 BMP8BP34820 402 aa22.8■■□□□ 1.24
SSBP4-207ENST00000600244 DUSP27Q5VZP5 1158 aa22.8■■□□□ 1.24
SSBP4-207ENST00000600244 Q7L0L9 218 aa22.8■■□□□ 1.24
SSBP4-207ENST00000600244 CDAN1Q8IWY9 1227 aa22.8■■□□□ 1.24
SSBP4-207ENST00000600244 HELBQ8NG08 1087 aaPredicted RBP22.8■■□□□ 1.24
SSBP4-207ENST00000600244 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.8■■□□□ 1.24
SSBP4-207ENST00000600244 U2AF1L4Q8WU68 220 aaKnown RBP22.8■■□□□ 1.24
SSBP4-207ENST00000600244 ANKRD2Q9GZV1 360 aa22.8■■□□□ 1.24
SSBP4-207ENST00000600244 MTMR10Q9NXD2 777 aa22.8■■□□□ 1.24
SSBP4-207ENST00000600244 SPEF2Q9C093 1822 aa22.8■■□□□ 1.24
SSBP4-207ENST00000600244 IRS2Q9Y4H2 1338 aa22.8■■□□□ 1.24
SSBP4-207ENST00000600244 CETPP11597 493 aa22.79■■□□□ 1.24
SSBP4-207ENST00000600244 PSMC4P43686 418 aa22.79■■□□□ 1.24
SSBP4-207ENST00000600244 FKBP1AP62942 108 aaKnown RBP22.79■■□□□ 1.24
SSBP4-207ENST00000600244 GDF15Q99988 308 aa22.79■■□□□ 1.24
SSBP4-207ENST00000600244 METTL22Q9BUU2 404 aaPredicted RBP22.79■■□□□ 1.24
SSBP4-207ENST00000600244 LAS1LQ9Y4W2 734 aaKnown RBP22.79■■□□□ 1.24
SSBP4-207ENST00000600244 SPDYE5A6NIY4 337 aa22.78■■□□□ 1.24
SSBP4-207ENST00000600244 HOXD10P28358 340 aa22.78■■□□□ 1.24
SSBP4-207ENST00000600244 RAET1EQ8TD07 263 aa22.78■■□□□ 1.24
SSBP4-207ENST00000600244 ECM2O94769 699 aaPredicted RBP22.77■■□□□ 1.24
SSBP4-207ENST00000600244 SGPL1O95470 568 aa22.77■■□□□ 1.24
SSBP4-207ENST00000600244 TNFAIP1Q13829 316 aa22.77■■□□□ 1.24
SSBP4-207ENST00000600244 SPDYE2Q495Y8 402 aa22.77■■□□□ 1.24
SSBP4-207ENST00000600244 IGHMBP2P38935 993 aaKnown RBP22.76■■□□□ 1.23
SSBP4-207ENST00000600244 UBXN2AP68543 259 aa22.76■■□□□ 1.23
SSBP4-207ENST00000600244 C15orf52Q6ZUT6 534 aaKnown RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms