RNA–Protein interactions for RNA: ENST00000599964.1

COPE-209, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 4

Gene COPE, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-209ENST00000599964 GTF2IP78347 998 aa23.22■■□□□ 1.31
COPE-209ENST00000599964 CXCL9Q07325 125 aa23.22■■□□□ 1.31
COPE-209ENST00000599964 C16orf71Q8IYS4 520 aaPredicted RBP23.22■■□□□ 1.31
COPE-209ENST00000599964 TBC1D22AQ8WUA7 517 aa23.22■■□□□ 1.31
COPE-209ENST00000599964 PDS5AQ29RF7 1337 aaKnown RBP23.22■■□□□ 1.31
COPE-209ENST00000599964 FAM205AQ6ZU69 1335 aa23.22■■□□□ 1.31
COPE-209ENST00000599964 ATP5JP18859 108 aa23.21■■□□□ 1.31
COPE-209ENST00000599964 CHAF1AQ13111 956 aaPredicted RBP23.21■■□□□ 1.31
COPE-209ENST00000599964 RASGRF1Q13972 1273 aa23.21■■□□□ 1.31
COPE-209ENST00000599964 SPATA5Q8NB90 893 aa23.21■■□□□ 1.31
COPE-209ENST00000599964 WDR66Q8TBY9 1149 aa23.21■■□□□ 1.31
COPE-209ENST00000599964 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.21■■□□□ 1.31
COPE-209ENST00000599964 MYO3BQ8WXR4 1341 aa23.2■■□□□ 1.3
COPE-209ENST00000599964 GPC2Q8N158 579 aa23.2■■□□□ 1.3
COPE-209ENST00000599964 ZGPATQ8N5A5 531 aaKnown RBP23.2■■□□□ 1.3
COPE-209ENST00000599964 GTF3C3Q9Y5Q9 886 aa23.2■■□□□ 1.3
COPE-209ENST00000599964 PSME4Q14997 1843 aa23.19■■□□□ 1.3
COPE-209ENST00000599964 FKBP1AP62942 108 aaKnown RBP23.19■■□□□ 1.3
COPE-209ENST00000599964 KCNQ5Q9NR82 932 aa23.19■■□□□ 1.3
COPE-209ENST00000599964 HMG20BQ9P0W2 317 aa23.19■■□□□ 1.3
COPE-209ENST00000599964 GJA3Q9Y6H8 435 aa23.19■■□□□ 1.3
COPE-209ENST00000599964 SALL3Q9BXA9 1300 aa23.18■■□□□ 1.3
COPE-209ENST00000599964 ZNF541Q9H0D2 1346 aa23.18■■□□□ 1.3
COPE-209ENST00000599964 PSMD14O00487 310 aa23.18■■□□□ 1.3
COPE-209ENST00000599964 GLRX3O76003 335 aaKnown RBP23.18■■□□□ 1.3
COPE-209ENST00000599964 VIL1P09327 827 aaKnown RBP23.18■■□□□ 1.3
COPE-209ENST00000599964 MCAMP43121 646 aa23.18■■□□□ 1.3
COPE-209ENST00000599964 OTUD7AQ8TE49 926 aaPredicted RBP23.18■■□□□ 1.3
COPE-209ENST00000599964 STAP2Q9UGK3 403 aa23.18■■□□□ 1.3
COPE-209ENST00000599964 SCN9AQ15858 1988 aa23.18■■□□□ 1.3
COPE-209ENST00000599964 AOX1Q06278 1338 aa23.17■■□□□ 1.3
COPE-209ENST00000599964 RPS12P25398 132 aaKnown RBP23.17■■□□□ 1.3
COPE-209ENST00000599964 PDE1AP54750 535 aa23.17■■□□□ 1.3
COPE-209ENST00000599964 DACT2Q5SW24 774 aa23.17■■□□□ 1.3
COPE-209ENST00000599964 RSBN1LQ6PCB5 846 aaPredicted RBP23.17■■□□□ 1.3
COPE-209ENST00000599964 SALL1Q9NSC2 1324 aa23.16■■□□□ 1.3
COPE-209ENST00000599964 GLTPD2A6NH11 291 aa23.16■■□□□ 1.3
COPE-209ENST00000599964 SCARF1Q14162 830 aa23.16■■□□□ 1.3
COPE-209ENST00000599964 MFSD14BQ5SR56 506 aa23.16■■□□□ 1.3
COPE-209ENST00000599964 SPTY2D1Q68D10 685 aaPredicted RBP23.16■■□□□ 1.3
COPE-209ENST00000599964 AGBL3Q8NEM8 1001 aa23.16■■□□□ 1.3
COPE-209ENST00000599964 BOLA2Q9H3K6 86 aa23.16■■□□□ 1.3
COPE-209ENST00000599964 JAG2Q9Y219 1238 aa23.16■■□□□ 1.3
COPE-209ENST00000599964 TTF1Q15361 905 aaPredicted RBP23.15■■□□□ 1.3
COPE-209ENST00000599964 HAUS7Q99871 368 aa23.15■■□□□ 1.3
COPE-209ENST00000599964 OSBPL3Q9H4L5 887 aa23.15■■□□□ 1.3
COPE-209ENST00000599964 SNRKQ9NRH2 765 aa23.15■■□□□ 1.3
COPE-209ENST00000599964 SUGT1Q9Y2Z0 365 aa23.15■■□□□ 1.3
COPE-209ENST00000599964 COL1A1P02452 1464 aaPredicted RBP23.14■■□□□ 1.29
COPE-209ENST00000599964 ZAP70P43403 619 aa23.14■■□□□ 1.29
COPE-209ENST00000599964 PLEKHM2Q8IWE5 1019 aa23.14■■□□□ 1.29
COPE-209ENST00000599964 DNAJC2Q99543 621 aaKnown RBP23.14■■□□□ 1.29
COPE-209ENST00000599964 IGSF3O75054 1194 aa23.13■■□□□ 1.29
COPE-209ENST00000599964 DDNO94850 711 aaPredicted RBP23.13■■□□□ 1.29
COPE-209ENST00000599964 PDE4AP27815 886 aa23.13■■□□□ 1.29
COPE-209ENST00000599964 MMP14P50281 582 aa23.13■■□□□ 1.29
COPE-209ENST00000599964 TSHZ3Q63HK5 1081 aa23.13■■□□□ 1.29
COPE-209ENST00000599964 PI16Q6UXB8 463 aa23.13■■□□□ 1.29
COPE-209ENST00000599964 PI4K2BQ8TCG2 481 aa23.13■■□□□ 1.29
COPE-209ENST00000599964 DPF2Q92785 391 aa23.13■■□□□ 1.29
COPE-209ENST00000599964 ABCF2Q9UG63 623 aa23.13■■□□□ 1.29
COPE-209ENST00000599964 MAST3O60307 1309 aa23.12■■□□□ 1.29
COPE-209ENST00000599964 AKAP11Q9UKA4 1901 aa23.12■■□□□ 1.29
COPE-209ENST00000599964 LDHBP07195 334 aaKnown RBP23.12■■□□□ 1.29
COPE-209ENST00000599964 LMOD1P29536 600 aaPredicted RBP23.12■■□□□ 1.29
COPE-209ENST00000599964 OGFOD1Q8N543 542 aa23.12■■□□□ 1.29
COPE-209ENST00000599964 PAG1Q9NWQ8 432 aa23.12■■□□□ 1.29
COPE-209ENST00000599964 LRP2BPQ9P2M1 347 aa23.12■■□□□ 1.29
COPE-209ENST00000599964 HDAC9Q9UKV0 1011 aa23.12■■□□□ 1.29
COPE-209ENST00000599964 ZBTB12Q9Y330 459 aaPredicted RBP23.12■■□□□ 1.29
COPE-209ENST00000599964 GMPSP49915 693 aaPredicted RBP23.11■■□□□ 1.29
COPE-209ENST00000599964 ERICH6Q7L0X2 663 aa23.11■■□□□ 1.29
COPE-209ENST00000599964 ZNF646O15015 1829 aaPredicted RBP23.1■■□□□ 1.29
COPE-209ENST00000599964 GOLIM4O00461 696 aa23.1■■□□□ 1.29
COPE-209ENST00000599964 CYP2E1P05181 493 aaPredicted RBP23.1■■□□□ 1.29
COPE-209ENST00000599964 USP17L8P0C7I0 530 aa23.1■■□□□ 1.29
COPE-209ENST00000599964 KIAA0825Q8IV33 1275 aa23.1■■□□□ 1.29
COPE-209ENST00000599964 CERS5Q8N5B7 392 aa23.1■■□□□ 1.29
COPE-209ENST00000599964 MXD3Q9BW11 206 aa23.1■■□□□ 1.29
COPE-209ENST00000599964 UTRNP46939 3433 aa23.1■■□□□ 1.29
COPE-209ENST00000599964 SLF2Q8IX21 1173 aa23.09■■□□□ 1.29
COPE-209ENST00000599964 L3MBTL3Q96JM7 780 aaPredicted RBP23.09■■□□□ 1.29
COPE-209ENST00000599964 GMLQ99445 158 aa23.09■■□□□ 1.29
COPE-209ENST00000599964 RAI14Q9P0K7 980 aa23.09■■□□□ 1.29
COPE-209ENST00000599964 TTF2Q9UNY4 1162 aaKnown RBP23.09■■□□□ 1.29
COPE-209ENST00000599964 IQCA1LA6NCM1 817 aa23.08■■□□□ 1.29
COPE-209ENST00000599964 H7C1D1 291 aa23.08■■□□□ 1.29
COPE-209ENST00000599964 MAP3K12Q12852 859 aa23.08■■□□□ 1.29
COPE-209ENST00000599964 TBC1D9Q6ZT07 1266 aa23.08■■□□□ 1.29
COPE-209ENST00000599964 DZIP1Q86YF9 867 aaKnown RBP23.08■■□□□ 1.29
COPE-209ENST00000599964 GPRC5DQ9NZD1 345 aa23.08■■□□□ 1.29
COPE-209ENST00000599964 CNOT7Q9UIV1 285 aaKnown RBP23.08■■□□□ 1.29
COPE-209ENST00000599964 F8W031 263 aaPredicted RBP23.07■■□□□ 1.28
COPE-209ENST00000599964 PRDX5P30044 214 aa23.07■■□□□ 1.28
COPE-209ENST00000599964 GSTO1P78417 241 aa23.07■■□□□ 1.28
COPE-209ENST00000599964 LRRFIP1Q32MZ4 808 aaKnown RBP23.07■■□□□ 1.28
COPE-209ENST00000599964 TMED8Q6PL24 325 aaPredicted RBP23.07■■□□□ 1.28
COPE-209ENST00000599964 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.07■■□□□ 1.28
COPE-209ENST00000599964 NDUFB9Q9Y6M9 179 aa23.07■■□□□ 1.28
COPE-209ENST00000599964 IDH1O75874 414 aaKnown RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms