RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	JAKMIP1	Q96N16	626 aa	Known RBP	13.24	□□□□□ -0.29
SUPT5H-216	ENST00000599335	SASH1	O94885	1247 aa		13.24	□□□□□ -0.29
SUPT5H-216	ENST00000599335	ZKSCAN1	P17029	563 aa	Predicted RBP	13.24	□□□□□ -0.29
SUPT5H-216	ENST00000599335	IFIT5	Q13325	482 aa	Known RBP	13.24	□□□□□ -0.29
SUPT5H-216	ENST00000599335	CCDC125	Q86Z20	511 aa		13.24	□□□□□ -0.29
SUPT5H-216	ENST00000599335	PLBD2	Q8NHP8	589 aa		13.24	□□□□□ -0.29
SUPT5H-216	ENST00000599335	CAMKK2	Q96RR4	588 aa		13.24	□□□□□ -0.29
SUPT5H-216	ENST00000599335	NDUFB9	Q9Y6M9	179 aa		13.24	□□□□□ -0.29
SUPT5H-216	ENST00000599335	MFSD4B	Q5TF39	518 aa		13.24	□□□□□ -0.29
SUPT5H-216	ENST00000599335	EVI5L	Q96CN4	794 aa		13.24	□□□□□ -0.29
SUPT5H-216	ENST00000599335	ABCA3	Q99758	1704 aa		13.23	□□□□□ -0.29
SUPT5H-216	ENST00000599335	IGHMBP2	P38935	993 aa	Known RBP	13.23	□□□□□ -0.29
SUPT5H-216	ENST00000599335	DNAJC21	Q5F1R6	531 aa	Known RBP	13.23	□□□□□ -0.29
SUPT5H-216	ENST00000599335	FLAD1	Q8NFF5	587 aa		13.23	□□□□□ -0.29
SUPT5H-216	ENST00000599335	EDC3	Q96F86	508 aa	Known RBP	13.23	□□□□□ -0.29
SUPT5H-216	ENST00000599335	LRRC37A3	O60309	1634 aa		13.23	□□□□□ -0.29
SUPT5H-216	ENST00000599335	SH3TC1	Q8TE82	1336 aa		13.23	□□□□□ -0.29
SUPT5H-216	ENST00000599335	PLSCR1	O15162	318 aa		13.23	□□□□□ -0.29
SUPT5H-216	ENST00000599335	RBM26	Q5T8P6	1007 aa	Known RBP	13.23	□□□□□ -0.29
SUPT5H-216	ENST00000599335	ICE2	Q659A1	982 aa		13.23	□□□□□ -0.29
SUPT5H-216	ENST00000599335	FAM227B	Q96M60	508 aa		13.23	□□□□□ -0.29
SUPT5H-216	ENST00000599335	MTX1	Q13505	466 aa		13.23	□□□□□ -0.29
SUPT5H-216	ENST00000599335	SUSD4	Q5VX71	490 aa		13.23	□□□□□ -0.29
SUPT5H-216	ENST00000599335	INTS5	Q6P9B9	1019 aa	Known RBP	13.23	□□□□□ -0.29
SUPT5H-216	ENST00000599335		F8W031	263 aa	Predicted RBP	13.22	□□□□□ -0.29
SUPT5H-216	ENST00000599335	HSPA4	P34932	840 aa		13.22	□□□□□ -0.29
SUPT5H-216	ENST00000599335	GRM1	Q13255	1194 aa		13.22	□□□□□ -0.29
SUPT5H-216	ENST00000599335	METTL24	Q5JXM2	366 aa		13.22	□□□□□ -0.29
SUPT5H-216	ENST00000599335	RASEF	Q8IZ41	740 aa		13.22	□□□□□ -0.29
SUPT5H-216	ENST00000599335	COL15A1	P39059	1388 aa		13.22	□□□□□ -0.29
SUPT5H-216	ENST00000599335	SNAP23	O00161	211 aa		13.22	□□□□□ -0.29
SUPT5H-216	ENST00000599335	TFCP2	Q12800	502 aa		13.22	□□□□□ -0.29
SUPT5H-216	ENST00000599335	ATP2B3	Q16720	1220 aa		13.22	□□□□□ -0.29
SUPT5H-216	ENST00000599335	RPAIN	Q86UA6	219 aa		13.22	□□□□□ -0.29
SUPT5H-216	ENST00000599335	GPR101	Q96P66	508 aa	Predicted RBP	13.22	□□□□□ -0.29
SUPT5H-216	ENST00000599335	SNX14	Q9Y5W7	946 aa		13.22	□□□□□ -0.29
SUPT5H-216	ENST00000599335	DISP2	A7MBM2	1401 aa		13.22	□□□□□ -0.29
SUPT5H-216	ENST00000599335	RAD50	Q92878	1312 aa		13.22	□□□□□ -0.29
SUPT5H-216	ENST00000599335	PES1	O00541	588 aa	Known RBP	13.22	□□□□□ -0.29
SUPT5H-216	ENST00000599335	C21orf2	O43822	256 aa		13.22	□□□□□ -0.29
SUPT5H-216	ENST00000599335	TAF5L	O75529	589 aa		13.22	□□□□□ -0.29
SUPT5H-216	ENST00000599335	LIG1	P18858	919 aa		13.22	□□□□□ -0.29
SUPT5H-216	ENST00000599335	PTH1R	Q03431	593 aa		13.22	□□□□□ -0.29
SUPT5H-216	ENST00000599335	TCIRG1	Q13488	830 aa		13.22	□□□□□ -0.29
SUPT5H-216	ENST00000599335	BCL9	O00512	1426 aa		13.22	□□□□□ -0.29
SUPT5H-216	ENST00000599335	MAP3K15	Q6ZN16	1313 aa		13.21	□□□□□ -0.29
SUPT5H-216	ENST00000599335	DHX16	O60231	1041 aa	Known RBP	13.21	□□□□□ -0.29
SUPT5H-216	ENST00000599335	NMI	Q13287	307 aa	Predicted RBP	13.21	□□□□□ -0.29
SUPT5H-216	ENST00000599335	RNF214	Q8ND24	703 aa		13.21	□□□□□ -0.29
SUPT5H-216	ENST00000599335	SEC31B	Q9NQW1	1179 aa		13.21	□□□□□ -0.29
SUPT5H-216	ENST00000599335	GJA3	Q9Y6H8	435 aa		13.21	□□□□□ -0.29
SUPT5H-216	ENST00000599335	RBM5	P52756	815 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
SUPT5H-216	ENST00000599335	NUCKS1	Q9H1E3	243 aa	Known RBP	13.21	□□□□□ -0.29
SUPT5H-216	ENST00000599335	GDPD2	Q9HCC8	539 aa		13.21	□□□□□ -0.29
SUPT5H-216	ENST00000599335	NARF	Q9UHQ1	456 aa		13.21	□□□□□ -0.29
SUPT5H-216	ENST00000599335	SMC3	Q9UQE7	1217 aa		13.21	□□□□□ -0.29
SUPT5H-216	ENST00000599335	TCEANC2	Q96MN5	208 aa		13.21	□□□□□ -0.3
SUPT5H-216	ENST00000599335	NRDC	O43847	1150 aa		13.2	□□□□□ -0.3
SUPT5H-216	ENST00000599335	AK2	P54819	239 aa		13.2	□□□□□ -0.3
SUPT5H-216	ENST00000599335	OLFM4	Q6UX06	510 aa		13.2	□□□□□ -0.3
SUPT5H-216	ENST00000599335	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.2	□□□□□ -0.3
SUPT5H-216	ENST00000599335	CCDC91	Q7Z6B0	441 aa		13.2	□□□□□ -0.3
SUPT5H-216	ENST00000599335	LSG1	Q9H089	658 aa	Known RBP	13.2	□□□□□ -0.3
SUPT5H-216	ENST00000599335	SUFU	Q9UMX1	484 aa		13.2	□□□□□ -0.3
SUPT5H-216	ENST00000599335	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.2	□□□□□ -0.3
SUPT5H-216	ENST00000599335	PDRG1	Q9NUG6	133 aa		13.2	□□□□□ -0.3
SUPT5H-216	ENST00000599335	CYP46A1	Q9Y6A2	500 aa		13.2	□□□□□ -0.3
SUPT5H-216	ENST00000599335	HMGN5	P82970	282 aa	Known RBP	13.2	□□□□□ -0.3
SUPT5H-216	ENST00000599335	ZKSCAN8	Q15776	578 aa	Predicted RBP	13.2	□□□□□ -0.3
SUPT5H-216	ENST00000599335	CREBRF	Q8IUR6	639 aa		13.2	□□□□□ -0.3
SUPT5H-216	ENST00000599335	CCDC83	Q8IWF9	413 aa		13.2	□□□□□ -0.3
SUPT5H-216	ENST00000599335	KCTD17	Q8N5Z5	321 aa		13.2	□□□□□ -0.3
SUPT5H-216	ENST00000599335	RBM27	Q9P2N5	1060 aa	Known RBP	13.2	□□□□□ -0.3
SUPT5H-216	ENST00000599335	ISY1	Q9ULR0	285 aa	Known RBP	13.2	□□□□□ -0.3
SUPT5H-216	ENST00000599335	SCN11A	Q9UI33	1791 aa		13.19	□□□□□ -0.3
SUPT5H-216	ENST00000599335	CAPN2	P17655	700 aa		13.19	□□□□□ -0.3
SUPT5H-216	ENST00000599335	EIF5	P55010	431 aa	Known RBP	13.19	□□□□□ -0.3
SUPT5H-216	ENST00000599335	ABCF2	Q9UG63	623 aa		13.19	□□□□□ -0.3
SUPT5H-216	ENST00000599335	RBM8A	Q9Y5S9	174 aa	Known RBP	13.19	□□□□□ -0.3
SUPT5H-216	ENST00000599335	HIP1	O00291	1037 aa		13.19	□□□□□ -0.3
SUPT5H-216	ENST00000599335	GYS1	P13807	737 aa		13.19	□□□□□ -0.3
SUPT5H-216	ENST00000599335	SNRK	Q9NRH2	765 aa		13.19	□□□□□ -0.3
SUPT5H-216	ENST00000599335	COL14A1	Q05707	1796 aa	Known RBP	13.19	□□□□□ -0.3
SUPT5H-216	ENST00000599335	PUS3	Q9BZE2	481 aa	Known RBP	13.19	□□□□□ -0.3
SUPT5H-216	ENST00000599335	KDM3B	Q7LBC6	1761 aa		13.18	□□□□□ -0.3
SUPT5H-216	ENST00000599335	ANKRD18B	A2A2Z9	1011 aa		13.18	□□□□□ -0.3
SUPT5H-216	ENST00000599335	KLHL40	Q2TBA0	621 aa		13.18	□□□□□ -0.3
SUPT5H-216	ENST00000599335	STK11IP	Q8N1F8	1099 aa		13.18	□□□□□ -0.3
SUPT5H-216	ENST00000599335	DBNDD2	Q9BQY9	259 aa		13.18	□□□□□ -0.3
SUPT5H-216	ENST00000599335	AK9	Q5TCS8	1911 aa		13.18	□□□□□ -0.3
SUPT5H-216	ENST00000599335	KIF1C	O43896	1103 aa	Known RBP	13.18	□□□□□ -0.3
SUPT5H-216	ENST00000599335	ANKRD18A	Q8IVF6	992 aa		13.18	□□□□□ -0.3
SUPT5H-216	ENST00000599335	NYX	Q9GZU5	481 aa		13.18	□□□□□ -0.3
SUPT5H-216	ENST00000599335	IRAK4	Q9NWZ3	460 aa		13.18	□□□□□ -0.3
SUPT5H-216	ENST00000599335	LIMCH1	Q9UPQ0	1083 aa		13.18	□□□□□ -0.3
SUPT5H-216	ENST00000599335	CACNA1F	O60840	1977 aa		13.18	□□□□□ -0.3
SUPT5H-216	ENST00000599335	VPS37C	A5D8V6	355 aa	Predicted RBP	13.18	□□□□□ -0.3
SUPT5H-216	ENST00000599335	U2AF2	P26368	475 aa	Known RBP eCLIP	13.18	□□□□□ -0.3	1e-7	■■■□□ 18.2
SUPT5H-216	ENST00000599335	HMGB2	P26583	209 aa	Known RBP	13.18	□□□□□ -0.3
SUPT5H-216	ENST00000599335	GABPB1	Q06547	395 aa	Predicted RBP	13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms