RNA–Protein interactions for RNA: ENST00000599138.5

VRK3-215, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 503 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-215ENST00000599138 PA2G4Q9UQ80 394 aaKnown RBP12.09□□□□□ -0.47
VRK3-215ENST00000599138 PITPNM2Q9BZ72 1349 aa12.09□□□□□ -0.47
VRK3-215ENST00000599138 WNT10BO00744 389 aa12.08□□□□□ -0.48
VRK3-215ENST00000599138 ZBTB7BO15156 539 aaPredicted RBP12.08□□□□□ -0.48
VRK3-215ENST00000599138 IFIT1P09914 478 aaKnown RBP12.08□□□□□ -0.48
VRK3-215ENST00000599138 NBPF9Q3BBW0 867 aa12.08□□□□□ -0.48
VRK3-215ENST00000599138 DLK2Q6UY11 383 aa12.08□□□□□ -0.48
VRK3-215ENST00000599138 MTMR14Q8NCE2 650 aa12.08□□□□□ -0.48
VRK3-215ENST00000599138 LPIN2Q92539 896 aa12.08□□□□□ -0.48
VRK3-215ENST00000599138 CEP126Q9P2H0 1117 aa12.08□□□□□ -0.48
VRK3-215ENST00000599138 MKRN1Q9UHC7 482 aaKnown RBP12.08□□□□□ -0.48
VRK3-215ENST00000599138 PNMA6EA0A0J9YXQ4 647 aa12.07□□□□□ -0.48
VRK3-215ENST00000599138 ADM5C9JUS6 153 aa12.07□□□□□ -0.48
VRK3-215ENST00000599138 ZBTB22O15209 634 aa12.07□□□□□ -0.48
VRK3-215ENST00000599138 CELF2O95319 508 aaKnown RBP12.07□□□□□ -0.48
VRK3-215ENST00000599138 SLC5A1P13866 664 aa12.07□□□□□ -0.48
VRK3-215ENST00000599138 BCAMP50895 628 aa12.07□□□□□ -0.48
VRK3-215ENST00000599138 CAVIN4Q5BKX8 364 aa12.07□□□□□ -0.48
VRK3-215ENST00000599138 ANGEL2Q5VTE6 544 aaKnown RBP12.07□□□□□ -0.48
VRK3-215ENST00000599138 RCAN3Q9UKA8 241 aa12.07□□□□□ -0.48
VRK3-215ENST00000599138 HDAC9Q9UKV0 1011 aa12.07□□□□□ -0.48
VRK3-215ENST00000599138 JAG2Q9Y219 1238 aa12.07□□□□□ -0.48
VRK3-215ENST00000599138 TLL2Q9Y6L7 1015 aa12.07□□□□□ -0.48
VRK3-215ENST00000599138 ARAP2Q8WZ64 1704 aa12.06□□□□□ -0.48
VRK3-215ENST00000599138 VEGFBP49765 207 aa12.06□□□□□ -0.48
VRK3-215ENST00000599138 ATP8B2P98198 1209 aa12.06□□□□□ -0.48
VRK3-215ENST00000599138 POLA2Q14181 598 aa12.06□□□□□ -0.48
VRK3-215ENST00000599138 ATP2B3Q16720 1220 aa12.06□□□□□ -0.48
VRK3-215ENST00000599138 DEFB115Q30KQ5 88 aa12.06□□□□□ -0.48
VRK3-215ENST00000599138 MFSD14BQ5SR56 506 aa12.06□□□□□ -0.48
VRK3-215ENST00000599138 SAPCD2Q86UD0 394 aa12.06□□□□□ -0.48
VRK3-215ENST00000599138 VPS37DQ86XT2 251 aa12.06□□□□□ -0.48
VRK3-215ENST00000599138 ITPRIPQ8IWB1 547 aa12.06□□□□□ -0.48
VRK3-215ENST00000599138 SULF1Q8IWU6 871 aa12.06□□□□□ -0.48
VRK3-215ENST00000599138 PANK1Q8TE04 598 aa12.06□□□□□ -0.48
VRK3-215ENST00000599138 SSH3Q8TE77 659 aa12.06□□□□□ -0.48
VRK3-215ENST00000599138 ABT1Q9ULW3 272 aaKnown RBP12.06□□□□□ -0.48
VRK3-215ENST00000599138 MS4A1P11836 297 aa12.05□□□□□ -0.48
VRK3-215ENST00000599138 HHIPL1Q96JK4 782 aa12.05□□□□□ -0.48
VRK3-215ENST00000599138 IQSEC3Q9UPP2 1182 aaPredicted RBP12.05□□□□□ -0.48
VRK3-215ENST00000599138 ECM29Q5VYK3 1845 aa12.04□□□□□ -0.48
VRK3-215ENST00000599138 MYH13Q9UKX3 1938 aa12.04□□□□□ -0.48
VRK3-215ENST00000599138 SPDYE2BA6NHP3 402 aa12.04□□□□□ -0.48
VRK3-215ENST00000599138 SPDYE6P0CI01 402 aa12.04□□□□□ -0.48
VRK3-215ENST00000599138 DLGAP5Q15398 846 aa12.04□□□□□ -0.48
VRK3-215ENST00000599138 GRIK5Q16478 980 aa12.04□□□□□ -0.48
VRK3-215ENST00000599138 CFAP100Q494V2 611 aa12.04□□□□□ -0.48
VRK3-215ENST00000599138 TBC1D22AQ8WUA7 517 aa12.04□□□□□ -0.48
VRK3-215ENST00000599138 CDCA5Q96FF9 252 aa12.04□□□□□ -0.48
VRK3-215ENST00000599138 PCDHAC2Q9Y5I4 1007 aa12.04□□□□□ -0.48
VRK3-215ENST00000599138 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.04□□□□□ -0.48
VRK3-215ENST00000599138 COL1A1P02452 1464 aaPredicted RBP12.03□□□□□ -0.48
VRK3-215ENST00000599138 F8W031 263 aaPredicted RBP12.03□□□□□ -0.48
VRK3-215ENST00000599138 TFCP2Q12800 502 aa12.03□□□□□ -0.48
VRK3-215ENST00000599138 PRMT6Q96LA8 375 aaPredicted RBP12.03□□□□□ -0.48
VRK3-215ENST00000599138 MRIQ9BWK5 157 aa12.03□□□□□ -0.48
VRK3-215ENST00000599138 C1orf115Q9H7X2 142 aa12.03□□□□□ -0.48
VRK3-215ENST00000599138 ZNF408Q9H9D4 720 aa12.03□□□□□ -0.48
VRK3-215ENST00000599138 GBA2Q9HCG7 927 aaPredicted RBP12.03□□□□□ -0.48
VRK3-215ENST00000599138 SERPINA10Q9UK55 444 aa12.03□□□□□ -0.48
VRK3-215ENST00000599138 TTF2Q9UNY4 1162 aaKnown RBP12.03□□□□□ -0.48
VRK3-215ENST00000599138 SUGT1Q9Y2Z0 365 aa12.03□□□□□ -0.48
VRK3-215ENST00000599138 AOX1Q06278 1338 aa12.03□□□□□ -0.48
VRK3-215ENST00000599138 WDR33Q9C0J8 1336 aaKnown RBP12.03□□□□□ -0.48
VRK3-215ENST00000599138 THSD7BQ9C0I4 1608 aa12.02□□□□□ -0.49
VRK3-215ENST00000599138 A0A1B0GUL7 405 aa12.02□□□□□ -0.49
VRK3-215ENST00000599138 SEMA3EO15041 775 aa12.02□□□□□ -0.49
VRK3-215ENST00000599138 FRAT2O75474 233 aaPredicted RBP12.02□□□□□ -0.49
VRK3-215ENST00000599138 ADORA1P30542 326 aa12.02□□□□□ -0.49
VRK3-215ENST00000599138 PHKA1P46020 1223 aa12.02□□□□□ -0.49
VRK3-215ENST00000599138 TIMM10P62072 90 aa12.02□□□□□ -0.49
VRK3-215ENST00000599138 HDLBPQ00341 1268 aaKnown RBP12.02□□□□□ -0.49
VRK3-215ENST00000599138 CHAF1AQ13111 956 aaPredicted RBP12.02□□□□□ -0.49
VRK3-215ENST00000599138 MVPQ14764 893 aaKnown RBP12.02□□□□□ -0.49
VRK3-215ENST00000599138 CEP85Q6P2H3 762 aa12.02□□□□□ -0.49
VRK3-215ENST00000599138 APOBEC3FQ8IUX4 373 aaKnown RBP12.02□□□□□ -0.49
VRK3-215ENST00000599138 CAPNS2Q96L46 248 aa12.02□□□□□ -0.49
VRK3-215ENST00000599138 SCAF8Q9UPN6 1271 aaKnown RBP12.02□□□□□ -0.49
VRK3-215ENST00000599138 AKAP2Q9Y2D5 859 aa12.02□□□□□ -0.49
VRK3-215ENST00000599138 NOP58Q9Y2X3 529 aaKnown RBP12.02□□□□□ -0.49
VRK3-215ENST00000599138 ECE1P42892 770 aa12.01□□□□□ -0.49
VRK3-215ENST00000599138 HUNKP57058 714 aa12.01□□□□□ -0.49
VRK3-215ENST00000599138 FKBP1BP68106 108 aa12.01□□□□□ -0.49
VRK3-215ENST00000599138 G3BP1Q13283 466 aaKnown RBP eCLIP12.01□□□□□ -0.49
VRK3-215ENST00000599138 PDE3AQ14432 1141 aa12.01□□□□□ -0.49
VRK3-215ENST00000599138 CCDC102BQ68D86 513 aa12.01□□□□□ -0.49
VRK3-215ENST00000599138 CYP4F22Q6NT55 531 aa12.01□□□□□ -0.49
VRK3-215ENST00000599138 C2orf69Q8N8R5 385 aa12.01□□□□□ -0.49
VRK3-215ENST00000599138 WDR66Q8TBY9 1149 aa12.01□□□□□ -0.49
VRK3-215ENST00000599138 XAGE2Q96GT9 111 aa12.01□□□□□ -0.49
VRK3-215ENST00000599138 GNL3LQ9NVN8 582 aaKnown RBP12.01□□□□□ -0.49
VRK3-215ENST00000599138 DDX19BQ9UMR2 479 aa12.01□□□□□ -0.49
VRK3-215ENST00000599138 PAPPA2Q9BXP8 1791 aa12□□□□□ -0.49
VRK3-215ENST00000599138 CRKP46108 304 aa12□□□□□ -0.49
VRK3-215ENST00000599138 SPDYE2Q495Y8 402 aa12□□□□□ -0.49
VRK3-215ENST00000599138 PRAMEF18Q5VWM3 479 aa12□□□□□ -0.49
VRK3-215ENST00000599138 DEFB129Q9H1M3 183 aa12□□□□□ -0.49
VRK3-215ENST00000599138 GPR108Q9NPR9 543 aa12□□□□□ -0.49
VRK3-215ENST00000599138 ZBTB40Q9NUA8 1239 aa12□□□□□ -0.49
VRK3-215ENST00000599138 WBP1LQ9NX94 342 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms