RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 ABHD8Q96I13 439 aa28.87■■■□□ 2.21
CCDC61-207ENST00000599044 F8W031 263 aaPredicted RBP28.86■■■□□ 2.21
CCDC61-207ENST00000599044 SLC10A3P09131 477 aa28.86■■■□□ 2.21
CCDC61-207ENST00000599044 HDAC9Q9UKV0 1011 aa28.86■■■□□ 2.21
CCDC61-207ENST00000599044 UBE2Q2LH0YL09 131 aa28.85■■■□□ 2.21
CCDC61-207ENST00000599044 CA12O43570 354 aa28.85■■■□□ 2.21
CCDC61-207ENST00000599044 GYG1P46976 350 aa28.85■■■□□ 2.21
CCDC61-207ENST00000599044 MMP14P50281 582 aa28.85■■■□□ 2.21
CCDC61-207ENST00000599044 ALDH1L2Q3SY69 923 aa28.85■■■□□ 2.21
CCDC61-207ENST00000599044 LRRC24Q50LG9 513 aa28.85■■■□□ 2.21
CCDC61-207ENST00000599044 CCER2I3L3R5 266 aa28.84■■■□□ 2.21
CCDC61-207ENST00000599044 RASAL3Q86YV0 1011 aa28.84■■■□□ 2.21
CCDC61-207ENST00000599044 KLHDC4Q8TBB5 520 aa28.84■■■□□ 2.21
CCDC61-207ENST00000599044 SMC4Q9NTJ3 1288 aa28.84■■■□□ 2.21
CCDC61-207ENST00000599044 FKBP1BP68106 108 aa28.83■■■□□ 2.21
CCDC61-207ENST00000599044 UBE4AQ14139 1066 aa28.83■■■□□ 2.21
CCDC61-207ENST00000599044 FAM84BQ96KN1 310 aaPredicted RBP28.83■■■□□ 2.21
CCDC61-207ENST00000599044 AOX1Q06278 1338 aa28.83■■■□□ 2.21
CCDC61-207ENST00000599044 CSRNP1Q96S65 589 aa28.82■■■□□ 2.2
CCDC61-207ENST00000599044 PAPPA2Q9BXP8 1791 aa28.82■■■□□ 2.2
CCDC61-207ENST00000599044 DLGAP5Q15398 846 aa28.81■■■□□ 2.2
CCDC61-207ENST00000599044 TDRD7Q8NHU6 1098 aaKnown RBP28.81■■■□□ 2.2
CCDC61-207ENST00000599044 MROH5Q6ZUA9 1318 aa28.8■■■□□ 2.2
CCDC61-207ENST00000599044 HIBADHP31937 336 aaKnown RBP28.8■■■□□ 2.2
CCDC61-207ENST00000599044 FKBP1AP62942 108 aaKnown RBP28.8■■■□□ 2.2
CCDC61-207ENST00000599044 MTMR14Q8NCE2 650 aa28.8■■■□□ 2.2
CCDC61-207ENST00000599044 PRMT6Q96LA8 375 aaPredicted RBP28.8■■■□□ 2.2
CCDC61-207ENST00000599044 FAM205AQ6ZU69 1335 aa28.79■■■□□ 2.2
CCDC61-207ENST00000599044 CFAP100Q494V2 611 aa28.79■■■□□ 2.2
CCDC61-207ENST00000599044 APOBEC3FQ8IUX4 373 aaKnown RBP28.79■■■□□ 2.2
CCDC61-207ENST00000599044 MIER1Q8N108 512 aa28.79■■■□□ 2.2
CCDC61-207ENST00000599044 PRKG1Q13976 671 aa28.78■■■□□ 2.2
CCDC61-207ENST00000599044 TTLL12Q14166 644 aaPredicted RBP28.78■■■□□ 2.2
CCDC61-207ENST00000599044 VGLL2Q8N8G2 317 aa28.78■■■□□ 2.2
CCDC61-207ENST00000599044 RNF186Q9NXI6 227 aa28.78■■■□□ 2.2
CCDC61-207ENST00000599044 NOB1Q9ULX3 412 aaKnown RBP28.78■■■□□ 2.2
CCDC61-207ENST00000599044 FZD1Q9UP38 647 aa28.78■■■□□ 2.2
CCDC61-207ENST00000599044 METTL24Q5JXM2 366 aa28.77■■■□□ 2.2
CCDC61-207ENST00000599044 CLRN2A0PK11 232 aa28.76■■■□□ 2.19
CCDC61-207ENST00000599044 SPDYE2BA6NHP3 402 aa28.76■■■□□ 2.19
CCDC61-207ENST00000599044 TRPA1O75762 1119 aa28.76■■■□□ 2.19
CCDC61-207ENST00000599044 SPDYE6P0CI01 402 aa28.76■■■□□ 2.19
CCDC61-207ENST00000599044 FBXO33Q7Z6M2 555 aa28.76■■■□□ 2.19
CCDC61-207ENST00000599044 DEFB129Q9H1M3 183 aa28.76■■■□□ 2.19
CCDC61-207ENST00000599044 IQSEC3Q9UPP2 1182 aaPredicted RBP28.76■■■□□ 2.19
CCDC61-207ENST00000599044 RFX5P48382 616 aaPredicted RBP28.75■■■□□ 2.19
CCDC61-207ENST00000599044 GRIK5Q16478 980 aa28.75■■■□□ 2.19
CCDC61-207ENST00000599044 MFSD14BQ5SR56 506 aa28.75■■■□□ 2.19
CCDC61-207ENST00000599044 PDE8BO95263 885 aa28.74■■■□□ 2.19
CCDC61-207ENST00000599044 PTPN12Q05209 780 aaKnown RBP28.74■■■□□ 2.19
CCDC61-207ENST00000599044 NF2P35240 595 aa28.73■■■□□ 2.19
CCDC61-207ENST00000599044 SAGE1Q9NXZ1 904 aa28.73■■■□□ 2.19
CCDC61-207ENST00000599044 CT47B1P0C2W7 299 aaPredicted RBP28.72■■■□□ 2.19
CCDC61-207ENST00000599044 RBM5P52756 815 aaKnown RBP eCLIP28.72■■■□□ 2.19
CCDC61-207ENST00000599044 TTF2Q9UNY4 1162 aaKnown RBP28.72■■■□□ 2.19
CCDC61-207ENST00000599044 BCAMP50895 628 aa28.71■■■□□ 2.19
CCDC61-207ENST00000599044 RARSP54136 660 aaKnown RBP28.71■■■□□ 2.19
CCDC61-207ENST00000599044 MKRN3Q13064 507 aaKnown RBP28.71■■■□□ 2.19
CCDC61-207ENST00000599044 ECM29Q5VYK3 1845 aa28.71■■■□□ 2.19
CCDC61-207ENST00000599044 SSC5DA1L4H1 1573 aa28.71■■■□□ 2.19
CCDC61-207ENST00000599044 LDLRAD1Q5T700 205 aa28.7■■■□□ 2.18
CCDC61-207ENST00000599044 MCOLN1Q9GZU1 580 aa28.7■■■□□ 2.18
CCDC61-207ENST00000599044 VEZTQ9HBM0 779 aa28.7■■■□□ 2.18
CCDC61-207ENST00000599044 ANGEL1Q9UNK9 670 aaKnown RBP28.7■■■□□ 2.18
CCDC61-207ENST00000599044 FGFR2P21802 821 aa28.69■■■□□ 2.18
CCDC61-207ENST00000599044 CHAF1AQ13111 956 aaPredicted RBP28.69■■■□□ 2.18
CCDC61-207ENST00000599044 ARMC9Q7Z3E5 817 aa28.69■■■□□ 2.18
CCDC61-207ENST00000599044 COL1A1P02452 1464 aaPredicted RBP28.68■■■□□ 2.18
CCDC61-207ENST00000599044 EYA2O00167 538 aa28.68■■■□□ 2.18
CCDC61-207ENST00000599044 MYO1BO43795 1136 aa28.68■■■□□ 2.18
CCDC61-207ENST00000599044 NBPF12Q5TAG4 269 aaPredicted RBP28.68■■■□□ 2.18
CCDC61-207ENST00000599044 ATG9AQ7Z3C6 839 aa28.68■■■□□ 2.18
CCDC61-207ENST00000599044 VPS37DQ86XT2 251 aa28.68■■■□□ 2.18
CCDC61-207ENST00000599044 UBTFL1P0CB47 393 aaPredicted RBP28.67■■■□□ 2.18
CCDC61-207ENST00000599044 CAVIN4Q5BKX8 364 aa28.67■■■□□ 2.18
CCDC61-207ENST00000599044 TDRD3Q9H7E2 651 aaKnown RBP28.67■■■□□ 2.18
CCDC61-207ENST00000599044 SERPINA10Q9UK55 444 aa28.67■■■□□ 2.18
CCDC61-207ENST00000599044 DGKZQ13574 1117 aa28.66■■■□□ 2.18
CCDC61-207ENST00000599044 RASA3Q14644 834 aa28.66■■■□□ 2.18
CCDC61-207ENST00000599044 REM2Q8IYK8 340 aaPredicted RBP28.66■■■□□ 2.18
CCDC61-207ENST00000599044 API5Q9BZZ5 524 aaKnown RBP28.66■■■□□ 2.18
CCDC61-207ENST00000599044 ZNF70Q9UC06 446 aaPredicted RBP28.66■■■□□ 2.18
CCDC61-207ENST00000599044 CCDC85CA6NKD9 419 aa28.65■■■□□ 2.18
CCDC61-207ENST00000599044 CRKP46108 304 aa28.65■■■□□ 2.18
CCDC61-207ENST00000599044 PUM3Q15397 648 aaKnown RBP28.65■■■□□ 2.18
CCDC61-207ENST00000599044 DZIP1LQ8IYY4 767 aaKnown RBP28.65■■■□□ 2.18
CCDC61-207ENST00000599044 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.65■■■□□ 2.18
CCDC61-207ENST00000599044 PPP2R3BQ9Y5P8 575 aa28.65■■■□□ 2.18
CCDC61-207ENST00000599044 LRRFIP2Q9Y608 721 aaKnown RBP28.65■■■□□ 2.18
CCDC61-207ENST00000599044 SPDYE2Q495Y8 402 aa28.64■■■□□ 2.18
CCDC61-207ENST00000599044 CLMNQ96JQ2 1002 aa28.64■■■□□ 2.18
CCDC61-207ENST00000599044 MEIS3Q99687 375 aa28.64■■■□□ 2.18
CCDC61-207ENST00000599044 SIL1Q9H173 461 aa28.64■■■□□ 2.18
CCDC61-207ENST00000599044 FRAT2O75474 233 aaPredicted RBP28.63■■■□□ 2.17
CCDC61-207ENST00000599044 TM4SF4P48230 202 aa28.63■■■□□ 2.17
CCDC61-207ENST00000599044 MAP3K11Q16584 847 aa28.63■■■□□ 2.17
CCDC61-207ENST00000599044 CDAN1Q8IWY9 1227 aa28.63■■■□□ 2.17
CCDC61-207ENST00000599044 TBC1D8O95759 1140 aa28.62■■■□□ 2.17
CCDC61-207ENST00000599044 IFIT1P09914 478 aaKnown RBP28.62■■■□□ 2.17
CCDC61-207ENST00000599044 SPRYD7Q5W111 196 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms