RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 MPP4Q96JB8 637 aa6.45□□□□□ -1.38
PAF1-208ENST00000598594 TTC14Q96N46 770 aa6.45□□□□□ -1.38
PAF1-208ENST00000598594 ATG3Q9NT62 314 aa6.45□□□□□ -1.38
PAF1-208ENST00000598594 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.45□□□□□ -1.38
PAF1-208ENST00000598594 FAM13BQ9NYF5 915 aa6.45□□□□□ -1.38
PAF1-208ENST00000598594 STIM2Q9P246 746 aa6.45□□□□□ -1.38
PAF1-208ENST00000598594 SEPT9Q9UHD8 586 aaPredicted RBP6.45□□□□□ -1.38
PAF1-208ENST00000598594 POLIQ9UNA4 740 aa6.45□□□□□ -1.38
PAF1-208ENST00000598594 PTCH2Q9Y6C5 1203 aa6.45□□□□□ -1.38
PAF1-208ENST00000598594 PIP5K1CO60331 668 aa6.44□□□□□ -1.38
PAF1-208ENST00000598594 SOX5P35711 763 aa6.44□□□□□ -1.38
PAF1-208ENST00000598594 PTK2Q05397 1052 aa6.44□□□□□ -1.38
PAF1-208ENST00000598594 ORC1Q13415 861 aa6.44□□□□□ -1.38
PAF1-208ENST00000598594 PIN1Q13526 163 aaPredicted RBP6.44□□□□□ -1.38
PAF1-208ENST00000598594 PUM3Q15397 648 aaKnown RBP6.44□□□□□ -1.38
PAF1-208ENST00000598594 HYIQ5T013 277 aa6.44□□□□□ -1.38
PAF1-208ENST00000598594 WWC2Q6AWC2 1192 aa6.44□□□□□ -1.38
PAF1-208ENST00000598594 NXNQ6DKJ4 435 aa6.44□□□□□ -1.38
PAF1-208ENST00000598594 MMS22LQ6ZRQ5 1243 aa6.44□□□□□ -1.38
PAF1-208ENST00000598594 RETREG3Q86VR2 466 aa6.44□□□□□ -1.38
PAF1-208ENST00000598594 GJD3Q8N144 294 aa6.44□□□□□ -1.38
PAF1-208ENST00000598594 CLASRPQ8N2M8 674 aaKnown RBP6.44□□□□□ -1.38
PAF1-208ENST00000598594 VPS37AQ8NEZ2 397 aa6.44□□□□□ -1.38
PAF1-208ENST00000598594 EAF1Q96JC9 268 aaPredicted RBP6.44□□□□□ -1.38
PAF1-208ENST00000598594 SCLT1Q96NL6 688 aa6.44□□□□□ -1.38
PAF1-208ENST00000598594 SMAD5Q99717 465 aaKnown RBP6.44□□□□□ -1.38
PAF1-208ENST00000598594 HERPUD2Q9BSE4 406 aa6.44□□□□□ -1.38
PAF1-208ENST00000598594 C2orf49Q9BVC5 232 aaPredicted RBP6.44□□□□□ -1.38
PAF1-208ENST00000598594 RTFDC1Q9BY42 306 aaPredicted RBP6.44□□□□□ -1.38
PAF1-208ENST00000598594 RETREG1Q9H6L5 497 aa6.44□□□□□ -1.38
PAF1-208ENST00000598594 LGR6Q9HBX8 967 aa6.44□□□□□ -1.38
PAF1-208ENST00000598594 AASDHPPTQ9NRN7 309 aa6.44□□□□□ -1.38
PAF1-208ENST00000598594 ADAMTS1Q9UHI8 967 aa6.44□□□□□ -1.38
PAF1-208ENST00000598594 FEZ2Q9UHY8 353 aaPredicted RBP6.44□□□□□ -1.38
PAF1-208ENST00000598594 PNMA3Q9UL41 463 aa6.44□□□□□ -1.38
PAF1-208ENST00000598594 KDM2BQ8NHM5 1336 aa6.44□□□□□ -1.38
PAF1-208ENST00000598594 A0A087X0B3 334 aa6.43□□□□□ -1.38
PAF1-208ENST00000598594 RASSF10A6NK89 507 aa6.43□□□□□ -1.38
PAF1-208ENST00000598594 EIF1AYO14602 144 aaKnown RBP6.43□□□□□ -1.38
PAF1-208ENST00000598594 IRS4O14654 1257 aaPredicted RBP6.43□□□□□ -1.38
PAF1-208ENST00000598594 TRIM37O94972 964 aa6.43□□□□□ -1.38
PAF1-208ENST00000598594 HSP90AB1P08238 724 aaKnown RBP6.43□□□□□ -1.38
PAF1-208ENST00000598594 SLC10A3P09131 477 aa6.43□□□□□ -1.38
PAF1-208ENST00000598594 TGFB3P10600 412 aa6.43□□□□□ -1.38
PAF1-208ENST00000598594 TRIM27P14373 513 aa6.43□□□□□ -1.38
PAF1-208ENST00000598594 DDR2Q16832 855 aa6.43□□□□□ -1.38
PAF1-208ENST00000598594 MTERF2Q49AM1 385 aa6.43□□□□□ -1.38
PAF1-208ENST00000598594 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.43□□□□□ -1.38
PAF1-208ENST00000598594 ARMC3Q5W041 872 aa6.43□□□□□ -1.38
PAF1-208ENST00000598594 ANKRD23Q86SG2 305 aa6.43□□□□□ -1.38
PAF1-208ENST00000598594 ATCAYQ86WG3 371 aa6.43□□□□□ -1.38
PAF1-208ENST00000598594 NIM1KQ8IY84 436 aa6.43□□□□□ -1.38
PAF1-208ENST00000598594 MAGEB6Q8N7X4 407 aa6.43□□□□□ -1.38
PAF1-208ENST00000598594 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.43□□□□□ -1.38
PAF1-208ENST00000598594 SCG3Q8WXD2 468 aaKnown RBP6.43□□□□□ -1.38
PAF1-208ENST00000598594 TATDN2Q93075 761 aa6.43□□□□□ -1.38
PAF1-208ENST00000598594 HOOK2Q96ED9 719 aa6.43□□□□□ -1.38
PAF1-208ENST00000598594 TRMT2BQ96GJ1 504 aaKnown RBP6.43□□□□□ -1.38
PAF1-208ENST00000598594 OCSTAMPQ9BR26 566 aa6.43□□□□□ -1.38
PAF1-208ENST00000598594 OSBPL7Q9BZF2 842 aa6.43□□□□□ -1.38
PAF1-208ENST00000598594 TSKSQ9UJT2 592 aa6.43□□□□□ -1.38
PAF1-208ENST00000598594 HPS5Q9UPZ3 1129 aa6.43□□□□□ -1.38
PAF1-208ENST00000598594 CHMP3Q9Y3E7 222 aa6.43□□□□□ -1.38
PAF1-208ENST00000598594 SH3BP1Q9Y3L3 701 aa6.43□□□□□ -1.38
PAF1-208ENST00000598594 ORC4O43929 436 aa6.42□□□□□ -1.38
PAF1-208ENST00000598594 NBNO60934 754 aa6.42□□□□□ -1.38
PAF1-208ENST00000598594 SERPINB3P29508 390 aa6.42□□□□□ -1.38
PAF1-208ENST00000598594 FUT2Q10981 343 aa6.42□□□□□ -1.38
PAF1-208ENST00000598594 TNNI3KQ59H18 835 aa6.42□□□□□ -1.38
PAF1-208ENST00000598594 USPL1Q5W0Q7 1092 aa6.42□□□□□ -1.38
PAF1-208ENST00000598594 MSL1Q68DK7 614 aa6.42□□□□□ -1.38
PAF1-208ENST00000598594 PASD1Q8IV76 773 aa6.42□□□□□ -1.38
PAF1-208ENST00000598594 JMYQ8N9B5 988 aa6.42□□□□□ -1.38
PAF1-208ENST00000598594 NINJ1Q92982 152 aa6.42□□□□□ -1.38
PAF1-208ENST00000598594 MYCBPQ99417 103 aaPredicted RBP6.42□□□□□ -1.38
PAF1-208ENST00000598594 OBP2AQ9NY56 170 aa6.42□□□□□ -1.38
PAF1-208ENST00000598594 PFDN2Q9UHV9 154 aa6.42□□□□□ -1.38
PAF1-208ENST00000598594 ZNF180Q9UJW8 692 aa6.42□□□□□ -1.38
PAF1-208ENST00000598594 MAPK8IP1Q9UQF2 711 aa6.42□□□□□ -1.38
PAF1-208ENST00000598594 GPSM3Q9Y4H4 160 aa6.42□□□□□ -1.38
PAF1-208ENST00000598594 IPPQ9Y573 584 aa6.42□□□□□ -1.38
PAF1-208ENST00000598594 GJA3Q9Y6H8 435 aa6.42□□□□□ -1.38
PAF1-208ENST00000598594 A0A1W2PRQ8 180 aa6.41□□□□□ -1.38
PAF1-208ENST00000598594 E2F8A0AVK6 867 aa6.41□□□□□ -1.38
PAF1-208ENST00000598594 NBPF26B4DH59 902 aa6.41□□□□□ -1.38
PAF1-208ENST00000598594 hCG_1984214I3L0E3 225 aa6.41□□□□□ -1.38
PAF1-208ENST00000598594 ZBTB39O15060 712 aa6.41□□□□□ -1.38
PAF1-208ENST00000598594 DIAPH1O60610 1272 aaKnown RBP6.41□□□□□ -1.38
PAF1-208ENST00000598594 PDE8AO60658 829 aa6.41□□□□□ -1.38
PAF1-208ENST00000598594 DEKP35659 375 aaKnown RBP6.41□□□□□ -1.38
PAF1-208ENST00000598594 ERFEQ4G0M1 354 aa6.41□□□□□ -1.38
PAF1-208ENST00000598594 AKAP4Q5JQC9 854 aa6.41□□□□□ -1.38
PAF1-208ENST00000598594 PERM1Q5SV97 790 aa6.41□□□□□ -1.38
PAF1-208ENST00000598594 PPP4R3AQ6IN85 833 aa6.41□□□□□ -1.38
PAF1-208ENST00000598594 PJA1Q8NG27 643 aa6.41□□□□□ -1.38
PAF1-208ENST00000598594 CHMP7Q8WUX9 453 aaPredicted RBP6.41□□□□□ -1.38
PAF1-208ENST00000598594 TIFAQ96CG3 184 aa6.41□□□□□ -1.38
PAF1-208ENST00000598594 STRBPQ96SI9 672 aaKnown RBP6.41□□□□□ -1.38
PAF1-208ENST00000598594 MAP10Q9P2G4 905 aa6.41□□□□□ -1.38
PAF1-208ENST00000598594 KLRG2A4D1S0 409 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms