RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 SLC5A1P13866 664 aa21.89■■□□□ 1.09
USHBP1-209ENST00000598570 BCAMP50895 628 aa21.89■■□□□ 1.09
USHBP1-209ENST00000598570 ATP2B3Q16720 1220 aa21.89■■□□□ 1.09
USHBP1-209ENST00000598570 RPAP2Q8IXW5 612 aaPredicted RBP21.89■■□□□ 1.09
USHBP1-209ENST00000598570 MYOZ2Q9NPC6 264 aa21.89■■□□□ 1.09
USHBP1-209ENST00000598570 GPR108Q9NPR9 543 aa21.89■■□□□ 1.09
USHBP1-209ENST00000598570 SIRT2Q8IXJ6 389 aa21.88■■□□□ 1.09
USHBP1-209ENST00000598570 MRIQ9BWK5 157 aa21.88■■□□□ 1.09
USHBP1-209ENST00000598570 CLEC11AQ9Y240 323 aa21.88■■□□□ 1.09
USHBP1-209ENST00000598570 TFCP2Q12800 502 aa21.87■■□□□ 1.09
USHBP1-209ENST00000598570 KIF4BQ2VIQ3 1234 aa21.87■■□□□ 1.09
USHBP1-209ENST00000598570 TBC1D10BQ4KMP7 808 aaPredicted RBP21.87■■□□□ 1.09
USHBP1-209ENST00000598570 C1orf115Q9H7X2 142 aa21.87■■□□□ 1.09
USHBP1-209ENST00000598570 AKAP2Q9Y2D5 859 aa21.87■■□□□ 1.09
USHBP1-209ENST00000598570 PITPNM2Q9BZ72 1349 aa21.86■■□□□ 1.09
USHBP1-209ENST00000598570 OGFOD1Q8N543 542 aa21.86■■□□□ 1.09
USHBP1-209ENST00000598570 CREBZFQ9NS37 354 aa21.86■■□□□ 1.09
USHBP1-209ENST00000598570 SUGT1Q9Y2Z0 365 aa21.86■■□□□ 1.09
USHBP1-209ENST00000598570 PDS5AQ29RF7 1337 aaKnown RBP21.85■■□□□ 1.09
USHBP1-209ENST00000598570 SEMA3EO15041 775 aa21.85■■□□□ 1.09
USHBP1-209ENST00000598570 G3BP1Q13283 466 aaKnown RBP eCLIP21.85■■□□□ 1.09
USHBP1-209ENST00000598570 CDC37L1Q7L3B6 337 aa21.85■■□□□ 1.09
USHBP1-209ENST00000598570 TRPM7Q96QT4 1865 aa21.84■■□□□ 1.09
USHBP1-209ENST00000598570 TIMM10P62072 90 aa21.84■■□□□ 1.09
USHBP1-209ENST00000598570 SCARF1Q14162 830 aa21.84■■□□□ 1.09
USHBP1-209ENST00000598570 TBC1D22AQ8WUA7 517 aa21.84■■□□□ 1.09
USHBP1-209ENST00000598570 YTHDC1Q96MU7 727 aaKnown RBP21.84■■□□□ 1.09
USHBP1-209ENST00000598570 A0A1B0GUL7 405 aa21.83■■□□□ 1.09
USHBP1-209ENST00000598570 WNT10BO00744 389 aa21.83■■□□□ 1.09
USHBP1-209ENST00000598570 RRP1P56182 461 aaKnown RBP21.83■■□□□ 1.09
USHBP1-209ENST00000598570 HDLBPQ00341 1268 aaKnown RBP21.83■■□□□ 1.09
USHBP1-209ENST00000598570 MFSD14BQ5SR56 506 aa21.83■■□□□ 1.09
USHBP1-209ENST00000598570 CST9Q5W186 159 aa21.83■■□□□ 1.09
USHBP1-209ENST00000598570 VPS37DQ86XT2 251 aa21.83■■□□□ 1.09
USHBP1-209ENST00000598570 KIAA0825Q8IV33 1275 aa21.83■■□□□ 1.09
USHBP1-209ENST00000598570 SALL1Q9NSC2 1324 aa21.82■■□□□ 1.08
USHBP1-209ENST00000598570 ADORA1P30542 326 aa21.82■■□□□ 1.08
USHBP1-209ENST00000598570 HDAC9Q9UKV0 1011 aa21.82■■□□□ 1.08
USHBP1-209ENST00000598570 ASTN2O75129 1339 aaPredicted RBP21.81■■□□□ 1.08
USHBP1-209ENST00000598570 TMEM88BA6NKF7 163 aa21.81■■□□□ 1.08
USHBP1-209ENST00000598570 SURF6O75683 361 aaKnown RBP21.81■■□□□ 1.08
USHBP1-209ENST00000598570 PHKA1P46020 1223 aa21.81■■□□□ 1.08
USHBP1-209ENST00000598570 NBPF9Q3BBW0 867 aa21.81■■□□□ 1.08
USHBP1-209ENST00000598570 CCDC102BQ68D86 513 aa21.81■■□□□ 1.08
USHBP1-209ENST00000598570 XAGE2Q96GT9 111 aa21.81■■□□□ 1.08
USHBP1-209ENST00000598570 SERPINA10Q9UK55 444 aa21.81■■□□□ 1.08
USHBP1-209ENST00000598570 COL1A1P02452 1464 aaPredicted RBP21.81■■□□□ 1.08
USHBP1-209ENST00000598570 TRAF5O00463 557 aa21.8■■□□□ 1.08
USHBP1-209ENST00000598570 RBM26Q5T8P6 1007 aaKnown RBP21.8■■□□□ 1.08
USHBP1-209ENST00000598570 WDR66Q8TBY9 1149 aa21.8■■□□□ 1.08
USHBP1-209ENST00000598570 ZNF512BQ96KM6 892 aaPredicted RBP21.8■■□□□ 1.08
USHBP1-209ENST00000598570 GLIS2Q9BZE0 524 aaPredicted RBP21.8■■□□□ 1.08
USHBP1-209ENST00000598570 GNL3LQ9NVN8 582 aaKnown RBP21.8■■□□□ 1.08
USHBP1-209ENST00000598570 GRIK5Q16478 980 aa21.79■■□□□ 1.08
USHBP1-209ENST00000598570 FBXW7Q969H0 707 aa21.79■■□□□ 1.08
USHBP1-209ENST00000598570 DCPSQ96C86 337 aaKnown RBP21.79■■□□□ 1.08
USHBP1-209ENST00000598570 MYH13Q9UKX3 1938 aa21.78■■□□□ 1.08
USHBP1-209ENST00000598570 SPDYE2BA6NHP3 402 aa21.78■■□□□ 1.08
USHBP1-209ENST00000598570 SPDYE6P0CI01 402 aa21.78■■□□□ 1.08
USHBP1-209ENST00000598570 FMR1Q06787 632 aaKnown RBP eCLIP21.78■■□□□ 1.08
USHBP1-209ENST00000598570 TNNI3KQ59H18 835 aa21.78■■□□□ 1.08
USHBP1-209ENST00000598570 ANGEL2Q5VTE6 544 aaKnown RBP21.78■■□□□ 1.08
USHBP1-209ENST00000598570 KRT26Q7Z3Y9 468 aa21.78■■□□□ 1.08
USHBP1-209ENST00000598570 USP48Q86UV5 1035 aa21.78■■□□□ 1.08
USHBP1-209ENST00000598570 GGA3Q9NZ52 723 aa21.78■■□□□ 1.08
USHBP1-209ENST00000598570 DENND2AQ9ULE3 1009 aa21.78■■□□□ 1.08
USHBP1-209ENST00000598570 IQSEC3Q9UPP2 1182 aaPredicted RBP21.78■■□□□ 1.08
USHBP1-209ENST00000598570 FPGT-TNNI3KV9GXZ4 949 aa21.78■■□□□ 1.08
USHBP1-209ENST00000598570 ECM29Q5VYK3 1845 aa21.78■■□□□ 1.08
USHBP1-209ENST00000598570 ARID4AP29374 1257 aaPredicted RBP21.77■■□□□ 1.08
USHBP1-209ENST00000598570 HTRA3P83110 453 aa21.77■■□□□ 1.08
USHBP1-209ENST00000598570 HSP90AB4PQ58FF6 505 aa21.77■■□□□ 1.08
USHBP1-209ENST00000598570 PRMT6Q96LA8 375 aaPredicted RBP21.77■■□□□ 1.08
USHBP1-209ENST00000598570 JAG2Q9Y219 1238 aa21.77■■□□□ 1.08
USHBP1-209ENST00000598570 RASSF10A6NK89 507 aa21.76■■□□□ 1.07
USHBP1-209ENST00000598570 HMMRO75330 724 aa21.76■■□□□ 1.07
USHBP1-209ENST00000598570 RASGRF1Q13972 1273 aa21.76■■□□□ 1.07
USHBP1-209ENST00000598570 DLGAP5Q15398 846 aa21.76■■□□□ 1.07
USHBP1-209ENST00000598570 ERC1Q8IUD2 1116 aa21.76■■□□□ 1.07
USHBP1-209ENST00000598570 JMYQ8N9B5 988 aa21.76■■□□□ 1.07
USHBP1-209ENST00000598570 KLRG1Q96E93 195 aa21.76■■□□□ 1.07
USHBP1-209ENST00000598570 CFAP100Q494V2 611 aa21.75■■□□□ 1.07
USHBP1-209ENST00000598570 HHIPL2Q6UWX4 724 aa21.75■■□□□ 1.07
USHBP1-209ENST00000598570 HHIPL1Q96JK4 782 aa21.75■■□□□ 1.07
USHBP1-209ENST00000598570 TTF2Q9UNY4 1162 aaKnown RBP21.75■■□□□ 1.07
USHBP1-209ENST00000598570 AKAP11Q9UKA4 1901 aa21.74■■□□□ 1.07
USHBP1-209ENST00000598570 FRAT2O75474 233 aaPredicted RBP21.74■■□□□ 1.07
USHBP1-209ENST00000598570 SULF1Q8IWU6 871 aa21.74■■□□□ 1.07
USHBP1-209ENST00000598570 EAF2Q96CJ1 260 aaPredicted RBP21.74■■□□□ 1.07
USHBP1-209ENST00000598570 ZDHHC15Q96MV8 337 aa21.74■■□□□ 1.07
USHBP1-209ENST00000598570 PCDHAC2Q9Y5I4 1007 aa21.74■■□□□ 1.07
USHBP1-209ENST00000598570 IGSF3O75054 1194 aa21.73■■□□□ 1.07
USHBP1-209ENST00000598570 RAB11FIP3O75154 756 aa21.73■■□□□ 1.07
USHBP1-209ENST00000598570 CHAF1AQ13111 956 aaPredicted RBP21.73■■□□□ 1.07
USHBP1-209ENST00000598570 DLK2Q6UY11 383 aa21.73■■□□□ 1.07
USHBP1-209ENST00000598570 FAM163AQ96GL9 167 aaPredicted RBP21.73■■□□□ 1.07
USHBP1-209ENST00000598570 EXOC6BQ9Y2D4 811 aa21.73■■□□□ 1.07
USHBP1-209ENST00000598570 TLL2Q9Y6L7 1015 aa21.73■■□□□ 1.07
USHBP1-209ENST00000598570 AOX1Q06278 1338 aa21.73■■□□□ 1.07
USHBP1-209ENST00000598570 CNTNAP1P78357 1384 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms