RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 PDIA3P30101 505 aaKnown RBP14.41□□□□□ -0.1
USHBP1-207ENST00000597928 CCDC144BQ3MJ40 725 aa14.41□□□□□ -0.1
USHBP1-207ENST00000597928 OLFM4Q6UX06 510 aa14.41□□□□□ -0.1
USHBP1-207ENST00000597928 GOLPH3LQ9H4A5 285 aa14.41□□□□□ -0.1
USHBP1-207ENST00000597928 ZSCAN16Q9H4T2 348 aaPredicted RBP14.41□□□□□ -0.1
USHBP1-207ENST00000597928 ARMT1Q9H993 441 aa14.41□□□□□ -0.1
USHBP1-207ENST00000597928 COPRSQ9NQ92 184 aa14.41□□□□□ -0.1
USHBP1-207ENST00000597928 UBE2Q2LH0YL09 131 aa14.4□□□□□ -0.1
USHBP1-207ENST00000597928 STARD3NLO95772 234 aa14.4□□□□□ -0.1
USHBP1-207ENST00000597928 SFPQP23246 707 aaKnown RBP eCLIP14.4□□□□□ -0.1
USHBP1-207ENST00000597928 ZSCAN25Q6NSZ9 544 aa14.4□□□□□ -0.1
USHBP1-207ENST00000597928 MAGEB6Q8N7X4 407 aa14.4□□□□□ -0.1
USHBP1-207ENST00000597928 NEURL4Q96JN8 1562 aa14.4□□□□□ -0.1
USHBP1-207ENST00000597928 ANKRD18BA2A2Z9 1011 aa14.4□□□□□ -0.1
USHBP1-207ENST00000597928 URI1O94763 535 aaPredicted RBP14.4□□□□□ -0.1
USHBP1-207ENST00000597928 IARSP41252 1262 aaKnown RBP14.4□□□□□ -0.1
USHBP1-207ENST00000597928 MYRIPQ8NFW9 859 aa14.4□□□□□ -0.1
USHBP1-207ENST00000597928 PCDHA7Q9UN72 937 aa14.4□□□□□ -0.1
USHBP1-207ENST00000597928 DLG5Q8TDM6 1919 aa14.4□□□□□ -0.1
USHBP1-207ENST00000597928 HMGB1P09429 215 aaKnown RBP14.4□□□□□ -0.1
USHBP1-207ENST00000597928 DHX8Q14562 1220 aaKnown RBP14.4□□□□□ -0.1
USHBP1-207ENST00000597928 CNNM3Q8NE01 707 aa14.4□□□□□ -0.1
USHBP1-207ENST00000597928 MNS1Q8NEH6 495 aa14.4□□□□□ -0.1
USHBP1-207ENST00000597928 MAP7D2Q96T17 732 aa14.4□□□□□ -0.1
USHBP1-207ENST00000597928 GREM2Q9H772 168 aa14.4□□□□□ -0.1
USHBP1-207ENST00000597928 SLC12A7Q9Y666 1083 aa14.4□□□□□ -0.1
USHBP1-207ENST00000597928 IRS4O14654 1257 aaPredicted RBP14.39□□□□□ -0.11
USHBP1-207ENST00000597928 USP27XA6NNY8 438 aa14.39□□□□□ -0.11
USHBP1-207ENST00000597928 SYKP43405 635 aa14.39□□□□□ -0.11
USHBP1-207ENST00000597928 AKAP2Q9Y2D5 859 aa14.39□□□□□ -0.11
USHBP1-207ENST00000597928 PXDNQ92626 1479 aa14.39□□□□□ -0.11
USHBP1-207ENST00000597928 DPCR1Q3MIW9 517 aa14.39□□□□□ -0.11
USHBP1-207ENST00000597928 SYT10Q6XYQ8 523 aa14.39□□□□□ -0.11
USHBP1-207ENST00000597928 TRMT44Q8IYL2 757 aaKnown RBP14.39□□□□□ -0.11
USHBP1-207ENST00000597928 TPM3P06753 285 aa14.38□□□□□ -0.11
USHBP1-207ENST00000597928 RESTQ13127 1097 aa14.38□□□□□ -0.11
USHBP1-207ENST00000597928 MTX1Q13505 466 aa14.38□□□□□ -0.11
USHBP1-207ENST00000597928 HLFQ16534 295 aa14.38□□□□□ -0.11
USHBP1-207ENST00000597928 ZFP91Q96JP5 570 aaPredicted RBP14.38□□□□□ -0.11
USHBP1-207ENST00000597928 MBD4O95243 580 aa14.38□□□□□ -0.11
USHBP1-207ENST00000597928 KIAA1524Q8TCG1 905 aa14.38□□□□□ -0.11
USHBP1-207ENST00000597928 BTG4Q9NY30 223 aa14.38□□□□□ -0.11
USHBP1-207ENST00000597928 DNAI1Q9UI46 699 aa14.38□□□□□ -0.11
USHBP1-207ENST00000597928 VIRMAQ69YN4 1812 aaKnown RBP14.37□□□□□ -0.11
USHBP1-207ENST00000597928 IL2RBP14784 551 aa14.37□□□□□ -0.11
USHBP1-207ENST00000597928 PHKA1P46020 1223 aa14.37□□□□□ -0.11
USHBP1-207ENST00000597928 PNOCQ13519 176 aa14.37□□□□□ -0.11
USHBP1-207ENST00000597928 EEF2KMTQ96G04 330 aa14.37□□□□□ -0.11
USHBP1-207ENST00000597928 UBAC1Q9BSL1 405 aa14.37□□□□□ -0.11
USHBP1-207ENST00000597928 ZBTB43O43298 467 aa14.37□□□□□ -0.11
USHBP1-207ENST00000597928 TCHHQ07283 1943 aa14.37□□□□□ -0.11
USHBP1-207ENST00000597928 POLR3GO15318 223 aaPredicted RBP14.37□□□□□ -0.11
USHBP1-207ENST00000597928 PRKAB2O43741 272 aa14.37□□□□□ -0.11
USHBP1-207ENST00000597928 PRIMPOLQ96LW4 560 aa14.37□□□□□ -0.11
USHBP1-207ENST00000597928 PLIN2Q99541 437 aa14.37□□□□□ -0.11
USHBP1-207ENST00000597928 XPO4Q9C0E2 1151 aaKnown RBP14.37□□□□□ -0.11
USHBP1-207ENST00000597928 ZNF532Q9HCE3 1301 aa14.36□□□□□ -0.11
USHBP1-207ENST00000597928 FAM160A1Q05DH4 1040 aa14.36□□□□□ -0.11
USHBP1-207ENST00000597928 GRAMD1CQ8IYS0 662 aa14.36□□□□□ -0.11
USHBP1-207ENST00000597928 RNF216Q9NWF9 866 aaPredicted RBP14.36□□□□□ -0.11
USHBP1-207ENST00000597928 ZNF609O15014 1411 aa14.36□□□□□ -0.11
USHBP1-207ENST00000597928 ZNF202O95125 648 aa14.36□□□□□ -0.11
USHBP1-207ENST00000597928 SAMD1Q6SPF0 538 aaPredicted RBP14.36□□□□□ -0.11
USHBP1-207ENST00000597928 SENP2Q9HC62 589 aa14.36□□□□□ -0.11
USHBP1-207ENST00000597928 MAPK8IP1Q9UQF2 711 aa14.36□□□□□ -0.11
USHBP1-207ENST00000597928 SLC4A4Q9Y6R1 1079 aa14.36□□□□□ -0.11
USHBP1-207ENST00000597928 RICTORQ6R327 1708 aa14.36□□□□□ -0.11
USHBP1-207ENST00000597928 UBASH3AP57075 661 aa14.35□□□□□ -0.11
USHBP1-207ENST00000597928 ATP1A3P13637 1013 aa14.35□□□□□ -0.11
USHBP1-207ENST00000597928 PIP4K2BP78356 416 aa14.35□□□□□ -0.11
USHBP1-207ENST00000597928 CADPS2Q86UW7 1296 aa14.35□□□□□ -0.11
USHBP1-207ENST00000597928 TRIM22Q8IYM9 498 aa14.35□□□□□ -0.11
USHBP1-207ENST00000597928 CEMIPQ8WUJ3 1361 aa14.35□□□□□ -0.11
USHBP1-207ENST00000597928 PFKFB2O60825 505 aa14.35□□□□□ -0.11
USHBP1-207ENST00000597928 SNW1Q13573 536 aaKnown RBP14.35□□□□□ -0.11
USHBP1-207ENST00000597928 PCMTD1Q96MG8 357 aaPredicted RBP14.35□□□□□ -0.11
USHBP1-207ENST00000597928 UIMC1Q96RL1 719 aa14.35□□□□□ -0.11
USHBP1-207ENST00000597928 UTP14AQ9BVJ6 771 aaKnown RBP14.35□□□□□ -0.11
USHBP1-207ENST00000597928 SEC31BQ9NQW1 1179 aa14.35□□□□□ -0.11
USHBP1-207ENST00000597928 WWC3Q9ULE0 1092 aa14.35□□□□□ -0.11
USHBP1-207ENST00000597928 KARSQ15046 597 aaKnown RBP14.34□□□□□ -0.11
USHBP1-207ENST00000597928 DZIP3Q86Y13 1208 aaKnown RBP14.34□□□□□ -0.11
USHBP1-207ENST00000597928 SDR42E1Q8WUS8 393 aa14.34□□□□□ -0.11
USHBP1-207ENST00000597928 SART3Q15020 963 aaKnown RBP14.34□□□□□ -0.11
USHBP1-207ENST00000597928 ELF2Q15723 593 aa14.34□□□□□ -0.11
USHBP1-207ENST00000597928 KIF18AQ8NI77 898 aa14.34□□□□□ -0.11
USHBP1-207ENST00000597928 TMEM94Q12767 1356 aa14.34□□□□□ -0.11
USHBP1-207ENST00000597928 ATG9AQ7Z3C6 839 aa14.34□□□□□ -0.11
USHBP1-207ENST00000597928 HELLSQ9NRZ9 838 aa14.34□□□□□ -0.11
USHBP1-207ENST00000597928 CTDNEP1O95476 244 aa14.33□□□□□ -0.11
USHBP1-207ENST00000597928 TOP1P11387 765 aaKnown RBP14.33□□□□□ -0.11
USHBP1-207ENST00000597928 ERCC3P19447 782 aa14.33□□□□□ -0.11
USHBP1-207ENST00000597928 BCAMP50895 628 aa14.33□□□□□ -0.11
USHBP1-207ENST00000597928 SSRP1Q08945 709 aaKnown RBP14.33□□□□□ -0.11
USHBP1-207ENST00000597928 KRT40Q6A162 431 aa14.33□□□□□ -0.11
USHBP1-207ENST00000597928 MFSD6Q6ZSS7 791 aa14.33□□□□□ -0.11
USHBP1-207ENST00000597928 ZNF215Q9UL58 517 aaPredicted RBP14.33□□□□□ -0.11
USHBP1-207ENST00000597928 CYP7A1P22680 504 aa14.33□□□□□ -0.12
USHBP1-207ENST00000597928 CASP1P29466 404 aa14.33□□□□□ -0.12
USHBP1-207ENST00000597928 ZMYM1Q5SVZ6 1142 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms