RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 CLIC4Q9Y696 253 aa14.59□□□□□ -0.07
ZNF558-205ENST00000597304 SIPA1L3O60292 1781 aaPredicted RBP14.59□□□□□ -0.07
ZNF558-205ENST00000597304 EFCAB8A8MWE9 144 aa14.59□□□□□ -0.07
ZNF558-205ENST00000597304 E7EWF7 191 aa14.59□□□□□ -0.07
ZNF558-205ENST00000597304 IKBKBO14920 756 aa14.59□□□□□ -0.07
ZNF558-205ENST00000597304 SPTLC2O15270 562 aa14.59□□□□□ -0.07
ZNF558-205ENST00000597304 TADA3O75528 432 aa14.59□□□□□ -0.07
ZNF558-205ENST00000597304 URI1O94763 535 aaPredicted RBP14.59□□□□□ -0.07
ZNF558-205ENST00000597304 POLR3EQ9NVU0 708 aa14.59□□□□□ -0.07
ZNF558-205ENST00000597304 ZNF202O95125 648 aa14.58□□□□□ -0.08
ZNF558-205ENST00000597304 HNRNPH2P55795 449 aaKnown RBP14.58□□□□□ -0.08
ZNF558-205ENST00000597304 PTPN12Q05209 780 aaKnown RBP14.58□□□□□ -0.08
ZNF558-205ENST00000597304 PDIA6Q15084 440 aa14.58□□□□□ -0.08
ZNF558-205ENST00000597304 TRIM65Q6PJ69 517 aa14.58□□□□□ -0.08
ZNF558-205ENST00000597304 MYD88Q99836 296 aa14.58□□□□□ -0.08
ZNF558-205ENST00000597304 HELLSQ9NRZ9 838 aa14.58□□□□□ -0.08
ZNF558-205ENST00000597304 PALLDQ8WX93 1383 aa14.58□□□□□ -0.08
ZNF558-205ENST00000597304 ATP8B1O43520 1251 aa14.58□□□□□ -0.08
ZNF558-205ENST00000597304 FDPSP14324 419 aaKnown RBP14.58□□□□□ -0.08
ZNF558-205ENST00000597304 RFX5P48382 616 aaPredicted RBP14.58□□□□□ -0.08
ZNF558-205ENST00000597304 PSME1Q06323 249 aa14.58□□□□□ -0.08
ZNF558-205ENST00000597304 SLC20A2Q08357 652 aa14.58□□□□□ -0.08
ZNF558-205ENST00000597304 LRRFIP1Q32MZ4 808 aaKnown RBP14.58□□□□□ -0.08
ZNF558-205ENST00000597304 CCDC158Q5M9N0 1113 aa14.58□□□□□ -0.08
ZNF558-205ENST00000597304 POLR3GO15318 223 aaPredicted RBP14.57□□□□□ -0.08
ZNF558-205ENST00000597304 CBFA2T2O43439 604 aa14.57□□□□□ -0.08
ZNF558-205ENST00000597304 POLR3DP05423 398 aaPredicted RBP14.57□□□□□ -0.08
ZNF558-205ENST00000597304 C8orf76Q96K31 380 aa14.57□□□□□ -0.08
ZNF558-205ENST00000597304 CARD6Q9BX69 1037 aa14.57□□□□□ -0.08
ZNF558-205ENST00000597304 CHST3Q7LGC8 479 aa14.57□□□□□ -0.08
ZNF558-205ENST00000597304 ATP1A3P13637 1013 aa14.56□□□□□ -0.08
ZNF558-205ENST00000597304 MYL6BP14649 208 aa14.56□□□□□ -0.08
ZNF558-205ENST00000597304 UBASH3AP57075 661 aa14.56□□□□□ -0.08
ZNF558-205ENST00000597304 MYSM1Q5VVJ2 828 aa14.56□□□□□ -0.08
ZNF558-205ENST00000597304 FCHSD1Q86WN1 690 aa14.56□□□□□ -0.08
ZNF558-205ENST00000597304 TXLNBQ8N3L3 684 aa14.56□□□□□ -0.08
ZNF558-205ENST00000597304 METTL22Q9BUU2 404 aaPredicted RBP14.56□□□□□ -0.08
ZNF558-205ENST00000597304 TSPYL1Q9H0U9 437 aa14.56□□□□□ -0.08
ZNF558-205ENST00000597304 PARP3Q9Y6F1 533 aa14.56□□□□□ -0.08
ZNF558-205ENST00000597304 ZSCAN12O43309 604 aa14.56□□□□□ -0.08
ZNF558-205ENST00000597304 SEC31AO94979 1220 aaKnown RBP14.56□□□□□ -0.08
ZNF558-205ENST00000597304 SERPINC1P01008 464 aa14.56□□□□□ -0.08
ZNF558-205ENST00000597304 EVCP57679 992 aa14.56□□□□□ -0.08
ZNF558-205ENST00000597304 OTUD7BQ6GQQ9 843 aa14.56□□□□□ -0.08
ZNF558-205ENST00000597304 BRAPQ7Z569 592 aa14.56□□□□□ -0.08
ZNF558-205ENST00000597304 UTP14AQ9BVJ6 771 aaKnown RBP14.56□□□□□ -0.08
ZNF558-205ENST00000597304 AFDNP55196 1824 aaKnown RBP14.55□□□□□ -0.08
ZNF558-205ENST00000597304 GOLIM4O00461 696 aa14.55□□□□□ -0.08
ZNF558-205ENST00000597304 HSPD1P10809 573 aaKnown RBP14.55□□□□□ -0.08
ZNF558-205ENST00000597304 PFKFB1P16118 471 aa14.55□□□□□ -0.08
ZNF558-205ENST00000597304 CAPN2P17655 700 aa14.55□□□□□ -0.08
ZNF558-205ENST00000597304 CFAP100Q494V2 611 aa14.55□□□□□ -0.08
ZNF558-205ENST00000597304 SYNE3Q6ZMZ3 975 aa14.55□□□□□ -0.08
ZNF558-205ENST00000597304 REXO1L1PQ8IX06 675 aa14.55□□□□□ -0.08
ZNF558-205ENST00000597304 XAGE3Q8WTP9 111 aa14.55□□□□□ -0.08
ZNF558-205ENST00000597304 TMX1Q9H3N1 280 aa14.55□□□□□ -0.08
ZNF558-205ENST00000597304 CCDC9Q9Y3X0 531 aaKnown RBP14.55□□□□□ -0.08
ZNF558-205ENST00000597304 PHRF1Q9P1Y6 1649 aaKnown RBP14.55□□□□□ -0.08
ZNF558-205ENST00000597304 C5P01031 1676 aa14.55□□□□□ -0.08
ZNF558-205ENST00000597304 A0A0G2JLW4 131 aa14.55□□□□□ -0.08
ZNF558-205ENST00000597304 ISM2Q6H9L7 571 aa14.55□□□□□ -0.08
ZNF558-205ENST00000597304 HSD3B7Q9H2F3 369 aa14.55□□□□□ -0.08
ZNF558-205ENST00000597304 PAG1Q9NWQ8 432 aa14.55□□□□□ -0.08
ZNF558-205ENST00000597304 VGLL3A8MV65 326 aa14.54□□□□□ -0.08
ZNF558-205ENST00000597304 FANCGO15287 622 aa14.54□□□□□ -0.08
ZNF558-205ENST00000597304 CMA1P23946 247 aa14.54□□□□□ -0.08
ZNF558-205ENST00000597304 MYL5Q02045 173 aa14.54□□□□□ -0.08
ZNF558-205ENST00000597304 ZMYM1Q5SVZ6 1142 aa14.54□□□□□ -0.08
ZNF558-205ENST00000597304 CYB5RLQ6IPT4 315 aa14.54□□□□□ -0.08
ZNF558-205ENST00000597304 NEK11Q8NG66 645 aa14.54□□□□□ -0.08
ZNF558-205ENST00000597304 MPHOSPH8Q99549 860 aa14.54□□□□□ -0.08
ZNF558-205ENST00000597304 TOP1P11387 765 aaKnown RBP14.54□□□□□ -0.08
ZNF558-205ENST00000597304 OAS2P29728 719 aaKnown RBP14.54□□□□□ -0.08
ZNF558-205ENST00000597304 GPS2Q13227 327 aa14.54□□□□□ -0.08
ZNF558-205ENST00000597304 RABL6Q3YEC7 729 aaPredicted RBP14.54□□□□□ -0.08
ZNF558-205ENST00000597304 ANO1Q5XXA6 986 aa14.54□□□□□ -0.08
ZNF558-205ENST00000597304 COPS6Q7L5N1 327 aa14.54□□□□□ -0.08
ZNF558-205ENST00000597304 KCNH5Q8NCM2 988 aa14.54□□□□□ -0.08
ZNF558-205ENST00000597304 FBXO18Q8NFZ0 1043 aa14.54□□□□□ -0.08
ZNF558-205ENST00000597304 DPF2Q92785 391 aa14.54□□□□□ -0.08
ZNF558-205ENST00000597304 UBXN6Q9BZV1 441 aa14.54□□□□□ -0.08
ZNF558-205ENST00000597304 DHX16O60231 1041 aaKnown RBP14.53□□□□□ -0.08
ZNF558-205ENST00000597304 TBC1D8O95759 1140 aa14.53□□□□□ -0.08
ZNF558-205ENST00000597304 RAD51AP2Q09MP3 1159 aa14.53□□□□□ -0.08
ZNF558-205ENST00000597304 AXDND1Q5T1B0 1012 aaPredicted RBP14.53□□□□□ -0.08
ZNF558-205ENST00000597304 CC2D1AQ6P1N0 951 aaPredicted RBP14.53□□□□□ -0.08
ZNF558-205ENST00000597304 UBE3BQ7Z3V4 1068 aa14.53□□□□□ -0.08
ZNF558-205ENST00000597304 VSTM4Q8IW00 320 aa14.53□□□□□ -0.08
ZNF558-205ENST00000597304 GPR161Q8N6U8 529 aaKnown RBP14.53□□□□□ -0.08
ZNF558-205ENST00000597304 TRERF1Q96PN7 1200 aa14.53□□□□□ -0.08
ZNF558-205ENST00000597304 MROH7-TTC4A0A0A0MT08 1334 aa14.53□□□□□ -0.08
ZNF558-205ENST00000597304 VWA3AA6NCI4 1184 aa14.53□□□□□ -0.08
ZNF558-205ENST00000597304 ARHGAP6O43182 974 aa14.53□□□□□ -0.08
ZNF558-205ENST00000597304 FAM177A1Q8N128 213 aaPredicted RBP14.53□□□□□ -0.08
ZNF558-205ENST00000597304 FBXL16Q8N461 479 aa14.53□□□□□ -0.08
ZNF558-205ENST00000597304 TUBE1Q9UJT0 475 aa14.53□□□□□ -0.08
ZNF558-205ENST00000597304 PHF8Q9UPP1 1060 aa14.53□□□□□ -0.08
ZNF558-205ENST00000597304 MAST3O60307 1309 aa14.53□□□□□ -0.08
ZNF558-205ENST00000597304 GOLGA6L9A6NEM1 432 aa14.52□□□□□ -0.08
ZNF558-205ENST00000597304 SASH3O75995 380 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms