RNA–Protein interactions for RNA: ENST00000596365.5

LINC00649-208, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 682 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-208	ENST00000596365	AIMP1	Q12904	312 aa	Known RBP	11.15	□□□□□ -0.62
LINC00649-208	ENST00000596365	PRKG1	Q13976	671 aa		11.15	□□□□□ -0.62
LINC00649-208	ENST00000596365	ARHGEF6	Q15052	776 aa		11.15	□□□□□ -0.62
LINC00649-208	ENST00000596365	SLC9C1	Q4G0N8	1177 aa		11.15	□□□□□ -0.62
LINC00649-208	ENST00000596365	COPS6	Q7L5N1	327 aa		11.15	□□□□□ -0.62
LINC00649-208	ENST00000596365	USP17L1	Q7RTZ2	530 aa		11.15	□□□□□ -0.62
LINC00649-208	ENST00000596365	SLC10A4	Q96EP9	437 aa		11.15	□□□□□ -0.62
LINC00649-208	ENST00000596365	RYDEN	Q9NUL5	291 aa	Known RBP	11.15	□□□□□ -0.62
LINC00649-208	ENST00000596365	ANKIB1	Q9P2G1	1089 aa		11.15	□□□□□ -0.62
LINC00649-208	ENST00000596365	RBM27	Q9P2N5	1060 aa	Known RBP	11.15	□□□□□ -0.62
LINC00649-208	ENST00000596365	ANGEL1	Q9UNK9	670 aa	Known RBP	11.15	□□□□□ -0.62
LINC00649-208	ENST00000596365	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
LINC00649-208	ENST00000596365	ANXA1	P04083	346 aa		11.14	□□□□□ -0.63
LINC00649-208	ENST00000596365	SP3	Q02447	781 aa		11.14	□□□□□ -0.63
LINC00649-208	ENST00000596365	PROSER3	Q2NL68	480 aa		11.14	□□□□□ -0.63
LINC00649-208	ENST00000596365	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.14	□□□□□ -0.63
LINC00649-208	ENST00000596365	OGFOD1	Q8N543	542 aa		11.14	□□□□□ -0.63
LINC00649-208	ENST00000596365	XAGE3	Q8WTP9	111 aa		11.14	□□□□□ -0.63
LINC00649-208	ENST00000596365	ZNF646	O15015	1829 aa	Predicted RBP	11.14	□□□□□ -0.63
LINC00649-208	ENST00000596365	POTEM	A6NI47	508 aa		11.13	□□□□□ -0.63
LINC00649-208	ENST00000596365	WNT10B	O00744	389 aa		11.13	□□□□□ -0.63
LINC00649-208	ENST00000596365	GTPBP6	O43824	516 aa	Predicted RBP	11.13	□□□□□ -0.63
LINC00649-208	ENST00000596365	MMP14	P50281	582 aa		11.13	□□□□□ -0.63
LINC00649-208	ENST00000596365	CRHR2	Q13324	411 aa		11.13	□□□□□ -0.63
LINC00649-208	ENST00000596365	PODN	Q7Z5L7	613 aa		11.13	□□□□□ -0.63
LINC00649-208	ENST00000596365	FAM89A	Q96GI7	184 aa		11.13	□□□□□ -0.63
LINC00649-208	ENST00000596365	WNK4	Q96J92	1243 aa		11.13	□□□□□ -0.63
LINC00649-208	ENST00000596365	ECM29	Q5VYK3	1845 aa		11.12	□□□□□ -0.63
LINC00649-208	ENST00000596365	POTEG	Q6S5H5	508 aa		11.12	□□□□□ -0.63
LINC00649-208	ENST00000596365	DPF3	Q92784	378 aa		11.12	□□□□□ -0.63
LINC00649-208	ENST00000596365	COL1A1	P02452	1464 aa	Predicted RBP	11.12	□□□□□ -0.63
LINC00649-208	ENST00000596365	MYO3B	Q8WXR4	1341 aa		11.11	□□□□□ -0.63
LINC00649-208	ENST00000596365	CLSPN	Q9HAW4	1339 aa		11.11	□□□□□ -0.63
LINC00649-208	ENST00000596365	UNCX	A6NJT0	531 aa		11.11	□□□□□ -0.63
LINC00649-208	ENST00000596365	MAP3K11	Q16584	847 aa		11.11	□□□□□ -0.63
LINC00649-208	ENST00000596365	ZNF428	Q96B54	188 aa		11.11	□□□□□ -0.63
LINC00649-208	ENST00000596365	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.11	□□□□□ -0.63
LINC00649-208	ENST00000596365	TSPYL4	Q9UJ04	414 aa		11.11	□□□□□ -0.63
LINC00649-208	ENST00000596365	PTCH2	Q9Y6C5	1203 aa		11.11	□□□□□ -0.63
LINC00649-208	ENST00000596365	XDH	P47989	1333 aa		11.1	□□□□□ -0.63
LINC00649-208	ENST00000596365	IRS4	O14654	1257 aa	Predicted RBP	11.1	□□□□□ -0.63
LINC00649-208	ENST00000596365	PPP1R12B	O60237	982 aa	Predicted RBP	11.1	□□□□□ -0.63
LINC00649-208	ENST00000596365	SASH1	O94885	1247 aa		11.1	□□□□□ -0.63
LINC00649-208	ENST00000596365	HOXB3	P14651	431 aa	Predicted RBP	11.1	□□□□□ -0.63
LINC00649-208	ENST00000596365	ATP2B4	P23634	1241 aa		11.1	□□□□□ -0.63
LINC00649-208	ENST00000596365	CLMN	Q96JQ2	1002 aa		11.1	□□□□□ -0.63
LINC00649-208	ENST00000596365	ISCA1	Q9BUE6	129 aa		11.1	□□□□□ -0.63
LINC00649-208	ENST00000596365	UNC80	Q8N2C7	3258 aa		11.09	□□□□□ -0.63
LINC00649-208	ENST00000596365		A0A1W2PPC1	479 aa		11.09	□□□□□ -0.63
LINC00649-208	ENST00000596365	HSP90B1	P14625	803 aa	Known RBP	11.09	□□□□□ -0.63
LINC00649-208	ENST00000596365	CAP1	Q01518	475 aa		11.09	□□□□□ -0.63
LINC00649-208	ENST00000596365	NFE2L2	Q16236	605 aa		11.09	□□□□□ -0.63
LINC00649-208	ENST00000596365	RTL5	Q5HYW3	569 aa	Predicted RBP	11.09	□□□□□ -0.63
LINC00649-208	ENST00000596365	DACT2	Q5SW24	774 aa		11.09	□□□□□ -0.63
LINC00649-208	ENST00000596365	PLBD2	Q8NHP8	589 aa		11.09	□□□□□ -0.63
LINC00649-208	ENST00000596365	PRO3102	Q9H379	93 aa		11.09	□□□□□ -0.63
LINC00649-208	ENST00000596365	SEC31B	Q9NQW1	1179 aa		11.09	□□□□□ -0.63
LINC00649-208	ENST00000596365	FZD1	Q9UP38	647 aa		11.09	□□□□□ -0.63
LINC00649-208	ENST00000596365	LAMA3	Q16787	3333 aa		11.08	□□□□□ -0.64
LINC00649-208	ENST00000596365	TESPA1	A2RU30	521 aa	Predicted RBP	11.08	□□□□□ -0.64
LINC00649-208	ENST00000596365	C2orf72	A6NCS6	295 aa		11.08	□□□□□ -0.64
LINC00649-208	ENST00000596365	WTIP	A6NIX2	430 aa	Predicted RBP	11.08	□□□□□ -0.64
LINC00649-208	ENST00000596365	ATP5J2-PTCD1	G3V325	749 aa		11.08	□□□□□ -0.64
LINC00649-208	ENST00000596365	MYC	P01106	439 aa	Predicted RBP	11.08	□□□□□ -0.64
LINC00649-208	ENST00000596365	STRIP1	Q5VSL9	837 aa		11.08	□□□□□ -0.64
LINC00649-208	ENST00000596365	FBXW7	Q969H0	707 aa		11.08	□□□□□ -0.64
LINC00649-208	ENST00000596365	HTATIP2	Q9BUP3	242 aa		11.08	□□□□□ -0.64
LINC00649-208	ENST00000596365	MXD3	Q9BW11	206 aa		11.08	□□□□□ -0.64
LINC00649-208	ENST00000596365	DEFB129	Q9H1M3	183 aa		11.08	□□□□□ -0.64
LINC00649-208	ENST00000596365	PPP2R3B	Q9Y5P8	575 aa		11.08	□□□□□ -0.64
LINC00649-208	ENST00000596365	NR2E3	Q9Y5X4	410 aa		11.08	□□□□□ -0.64
LINC00649-208	ENST00000596365	SPEF2	Q9C093	1822 aa		11.07	□□□□□ -0.64
LINC00649-208	ENST00000596365	MED23	Q9ULK4	1368 aa		11.07	□□□□□ -0.64
LINC00649-208	ENST00000596365	OTOF	Q9HC10	1997 aa		11.07	□□□□□ -0.64
LINC00649-208	ENST00000596365	IREB2	P48200	963 aa	Known RBP	11.07	□□□□□ -0.64
LINC00649-208	ENST00000596365	SUPT20HL1	Q3ZLR7	823 aa		11.07	□□□□□ -0.64
LINC00649-208	ENST00000596365	CCDC152	Q4G0S7	254 aa		11.07	□□□□□ -0.64
LINC00649-208	ENST00000596365	ANKRD13D	Q6ZTN6	518 aa		11.07	□□□□□ -0.64
LINC00649-208	ENST00000596365	BBX	Q8WY36	941 aa	Predicted RBP	11.07	□□□□□ -0.64
LINC00649-208	ENST00000596365	PTPN18	Q99952	460 aa		11.07	□□□□□ -0.64
LINC00649-208	ENST00000596365	BABAM1	Q9NWV8	329 aa		11.07	□□□□□ -0.64
LINC00649-208	ENST00000596365	SSC5D	A1L4H1	1573 aa		11.07	□□□□□ -0.64
LINC00649-208	ENST00000596365	PPP2R1A	P30153	589 aa		11.06	□□□□□ -0.64
LINC00649-208	ENST00000596365	GJA5	P36382	358 aa		11.06	□□□□□ -0.64
LINC00649-208	ENST00000596365	TRIM28	Q13263	835 aa	Known RBP	11.06	□□□□□ -0.64
LINC00649-208	ENST00000596365	KIF22	Q14807	665 aa		11.06	□□□□□ -0.64
LINC00649-208	ENST00000596365	ANKRD18A	Q8IVF6	992 aa		11.06	□□□□□ -0.64
LINC00649-208	ENST00000596365	NKX2-3	Q8TAU0	364 aa		11.06	□□□□□ -0.64
LINC00649-208	ENST00000596365	SH3TC2	Q8TF17	1288 aa		11.06	□□□□□ -0.64
LINC00649-208	ENST00000596365	ZBED3	Q96IU2	234 aa	Predicted RBP	11.06	□□□□□ -0.64
LINC00649-208	ENST00000596365	ZFYVE28	Q9HCC9	887 aa		11.06	□□□□□ -0.64
LINC00649-208	ENST00000596365	ZSWIM8	A7E2V4	1837 aa		11.06	□□□□□ -0.64
LINC00649-208	ENST00000596365	GNRH1	P01148	92 aa		11.05	□□□□□ -0.64
LINC00649-208	ENST00000596365	PRMT2	P55345	433 aa		11.05	□□□□□ -0.64
LINC00649-208	ENST00000596365	TAF1C	Q15572	869 aa	Predicted RBP	11.05	□□□□□ -0.64
LINC00649-208	ENST00000596365	ANKRD13A	Q8IZ07	590 aa		11.05	□□□□□ -0.64
LINC00649-208	ENST00000596365	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.05	□□□□□ -0.64
LINC00649-208	ENST00000596365	TMC2	Q8TDI7	906 aa		11.05	□□□□□ -0.64
LINC00649-208	ENST00000596365	SHISA4	Q96DD7	197 aa		11.05	□□□□□ -0.64
LINC00649-208	ENST00000596365	PLEKHF1	Q96S99	279 aa		11.05	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms