RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 FAM205AQ6ZU69 1335 aa23.75■■□□□ 1.39
PNKP-207ENST00000596014 VEGFAP15692 232 aaPredicted RBP23.74■■□□□ 1.39
PNKP-207ENST00000596014 AACSQ86V21 672 aa23.74■■□□□ 1.39
PNKP-207ENST00000596014 DBNLQ9UJU6 430 aaKnown RBP23.74■■□□□ 1.39
PNKP-207ENST00000596014 RPS12P25398 132 aaKnown RBP23.73■■□□□ 1.39
PNKP-207ENST00000596014 GPRC5DQ9NZD1 345 aa23.73■■□□□ 1.39
PNKP-207ENST00000596014 IGHDP01880 384 aa23.73■■□□□ 1.39
PNKP-207ENST00000596014 AGBL3Q8NEM8 1001 aa23.73■■□□□ 1.39
PNKP-207ENST00000596014 DPF2Q92785 391 aa23.73■■□□□ 1.39
PNKP-207ENST00000596014 GMLQ99445 158 aa23.73■■□□□ 1.39
PNKP-207ENST00000596014 BCL11AQ9H165 835 aa23.73■■□□□ 1.39
PNKP-207ENST00000596014 TLR7Q9NYK1 1049 aaKnown RBP23.73■■□□□ 1.39
PNKP-207ENST00000596014 IQCA1LA6NCM1 817 aa23.72■■□□□ 1.39
PNKP-207ENST00000596014 SMARCA5O60264 1052 aaPredicted RBP23.72■■□□□ 1.39
PNKP-207ENST00000596014 LMOD1P29536 600 aaPredicted RBP23.72■■□□□ 1.39
PNKP-207ENST00000596014 GCC1Q96CN9 775 aa23.72■■□□□ 1.39
PNKP-207ENST00000596014 HACL1Q9UJ83 578 aa23.72■■□□□ 1.39
PNKP-207ENST00000596014 SEMA3EO15041 775 aa23.71■■□□□ 1.39
PNKP-207ENST00000596014 ZBTB22O15209 634 aa23.71■■□□□ 1.39
PNKP-207ENST00000596014 EPS15P42566 896 aa23.71■■□□□ 1.39
PNKP-207ENST00000596014 CHAF1AQ13111 956 aaPredicted RBP23.71■■□□□ 1.39
PNKP-207ENST00000596014 CNOT7Q9UIV1 285 aaKnown RBP23.71■■□□□ 1.39
PNKP-207ENST00000596014 MYO3BQ8WXR4 1341 aa23.71■■□□□ 1.39
PNKP-207ENST00000596014 CCDC158Q5M9N0 1113 aa23.7■■□□□ 1.39
PNKP-207ENST00000596014 CERS5Q8N5B7 392 aa23.7■■□□□ 1.39
PNKP-207ENST00000596014 FKBP1AP62942 108 aaKnown RBP23.7■■□□□ 1.38
PNKP-207ENST00000596014 DENND2AQ9ULE3 1009 aa23.7■■□□□ 1.38
PNKP-207ENST00000596014 SHTN1A0MZ66 631 aa23.69■■□□□ 1.38
PNKP-207ENST00000596014 IFIT2P09913 472 aaKnown RBP23.69■■□□□ 1.38
PNKP-207ENST00000596014 ARID4AP29374 1257 aaPredicted RBP23.69■■□□□ 1.38
PNKP-207ENST00000596014 RASGRF1Q13972 1273 aa23.69■■□□□ 1.38
PNKP-207ENST00000596014 MFSD14BQ5SR56 506 aa23.69■■□□□ 1.38
PNKP-207ENST00000596014 MICALL2Q8IY33 904 aa23.69■■□□□ 1.38
PNKP-207ENST00000596014 TAF1DQ9H5J8 278 aaPredicted RBP23.69■■□□□ 1.38
PNKP-207ENST00000596014 COL1A1P02452 1464 aaPredicted RBP23.69■■□□□ 1.38
PNKP-207ENST00000596014 H7C1D1 291 aa23.68■■□□□ 1.38
PNKP-207ENST00000596014 KIF3CO14782 793 aa23.68■■□□□ 1.38
PNKP-207ENST00000596014 UQCRFS1P1P0C7P4 283 aa23.68■■□□□ 1.38
PNKP-207ENST00000596014 EPHX2P34913 555 aa23.68■■□□□ 1.38
PNKP-207ENST00000596014 TTC39AQ5SRH9 613 aa23.68■■□□□ 1.38
PNKP-207ENST00000596014 SMC5Q8IY18 1101 aa23.68■■□□□ 1.38
PNKP-207ENST00000596014 USP17L8P0C7I0 530 aa23.67■■□□□ 1.38
PNKP-207ENST00000596014 KIAA0825Q8IV33 1275 aa23.67■■□□□ 1.38
PNKP-207ENST00000596014 TBC1D22AQ8WUA7 517 aa23.67■■□□□ 1.38
PNKP-207ENST00000596014 ZNF512BQ96KM6 892 aaPredicted RBP23.67■■□□□ 1.38
PNKP-207ENST00000596014 ERICH6BQ5W0A0 696 aa23.67■■□□□ 1.38
PNKP-207ENST00000596014 WDR66Q8TBY9 1149 aa23.67■■□□□ 1.38
PNKP-207ENST00000596014 HMG20BQ9P0W2 317 aa23.67■■□□□ 1.38
PNKP-207ENST00000596014 AKAP11Q9UKA4 1901 aa23.66■■□□□ 1.38
PNKP-207ENST00000596014 SCARF1Q14162 830 aa23.66■■□□□ 1.38
PNKP-207ENST00000596014 ANKRD45Q5TZF3 282 aa23.66■■□□□ 1.38
PNKP-207ENST00000596014 ADARB2Q9NS39 739 aaKnown RBP23.66■■□□□ 1.38
PNKP-207ENST00000596014 PDS5AQ29RF7 1337 aaKnown RBP23.65■■□□□ 1.38
PNKP-207ENST00000596014 MCAMP43121 646 aa23.65■■□□□ 1.38
PNKP-207ENST00000596014 ZNF280AP59817 542 aaPredicted RBP23.65■■□□□ 1.38
PNKP-207ENST00000596014 SPATA5Q8NB90 893 aa23.65■■□□□ 1.38
PNKP-207ENST00000596014 GRIK5Q16478 980 aa23.64■■□□□ 1.38
PNKP-207ENST00000596014 PNMA8AQ86V59 439 aaPredicted RBP23.64■■□□□ 1.38
PNKP-207ENST00000596014 OGFOD1Q8N543 542 aa23.64■■□□□ 1.38
PNKP-207ENST00000596014 F8W031 263 aaPredicted RBP23.64■■□□□ 1.37
PNKP-207ENST00000596014 PI16Q6UXB8 463 aa23.64■■□□□ 1.37
PNKP-207ENST00000596014 SAMD7Q7Z3H4 446 aa23.64■■□□□ 1.37
PNKP-207ENST00000596014 MMP14P50281 582 aa23.63■■□□□ 1.37
PNKP-207ENST00000596014 B4GALNT3Q6L9W6 998 aa23.63■■□□□ 1.37
PNKP-207ENST00000596014 USP50Q70EL3 339 aaPredicted RBP23.63■■□□□ 1.37
PNKP-207ENST00000596014 C16orf71Q8IYS4 520 aaPredicted RBP23.63■■□□□ 1.37
PNKP-207ENST00000596014 ZBTB47Q9UFB7 747 aaPredicted RBP23.63■■□□□ 1.37
PNKP-207ENST00000596014 SALL1Q9NSC2 1324 aa23.62■■□□□ 1.37
PNKP-207ENST00000596014 EGFRP00533 1210 aa23.62■■□□□ 1.37
PNKP-207ENST00000596014 TBC1D10BQ4KMP7 808 aaPredicted RBP23.62■■□□□ 1.37
PNKP-207ENST00000596014 EAPPQ56P03 285 aaPredicted RBP23.62■■□□□ 1.37
PNKP-207ENST00000596014 SNRKQ9NRH2 765 aa23.62■■□□□ 1.37
PNKP-207ENST00000596014 HDAC9Q9UKV0 1011 aa23.62■■□□□ 1.37
PNKP-207ENST00000596014 TTF2Q9UNY4 1162 aaKnown RBP23.62■■□□□ 1.37
PNKP-207ENST00000596014 RBM26Q5T8P6 1007 aaKnown RBP23.61■■□□□ 1.37
PNKP-207ENST00000596014 TRPM4Q8TD43 1214 aa23.61■■□□□ 1.37
PNKP-207ENST00000596014 MYOZ2Q9NPC6 264 aa23.61■■□□□ 1.37
PNKP-207ENST00000596014 SUGT1Q9Y2Z0 365 aa23.61■■□□□ 1.37
PNKP-207ENST00000596014 POTEIP0CG38 1075 aa23.6■■□□□ 1.37
PNKP-207ENST00000596014 POTEJP0CG39 1038 aa23.6■■□□□ 1.37
PNKP-207ENST00000596014 HIRAP54198 1017 aaPredicted RBP23.6■■□□□ 1.37
PNKP-207ENST00000596014 ZGPATQ8N5A5 531 aaKnown RBP23.6■■□□□ 1.37
PNKP-207ENST00000596014 ABCF2Q9UG63 623 aa23.6■■□□□ 1.37
PNKP-207ENST00000596014 TOMM70O94826 608 aa23.58■■□□□ 1.37
PNKP-207ENST00000596014 LDHBP07195 334 aaKnown RBP23.58■■□□□ 1.37
PNKP-207ENST00000596014 PRDX5P30044 214 aa23.58■■□□□ 1.37
PNKP-207ENST00000596014 ZAP70P43403 619 aa23.58■■□□□ 1.37
PNKP-207ENST00000596014 NUCB1Q02818 461 aa23.58■■□□□ 1.37
PNKP-207ENST00000596014 KIF4BQ2VIQ3 1234 aa23.58■■□□□ 1.37
PNKP-207ENST00000596014 TBC1D9Q6ZT07 1266 aa23.58■■□□□ 1.37
PNKP-207ENST00000596014 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.58■■□□□ 1.37
PNKP-207ENST00000596014 LNPKQ9C0E8 428 aa23.58■■□□□ 1.37
PNKP-207ENST00000596014 CYP2E1P05181 493 aaPredicted RBP23.57■■□□□ 1.36
PNKP-207ENST00000596014 ATP5JP18859 108 aa23.57■■□□□ 1.36
PNKP-207ENST00000596014 LDHDQ86WU2 507 aa23.57■■□□□ 1.36
PNKP-207ENST00000596014 OTUD7AQ8TE49 926 aaPredicted RBP23.57■■□□□ 1.36
PNKP-207ENST00000596014 ECHDC1Q9NTX5 307 aa23.57■■□□□ 1.36
PNKP-207ENST00000596014 ADAMTSL1Q8N6G6 1762 aa23.57■■□□□ 1.36
PNKP-207ENST00000596014 SPTY2D1Q68D10 685 aaPredicted RBP23.57■■□□□ 1.36
PNKP-207ENST00000596014 CHD1LQ86WJ1 897 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms