RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 ANKRD44Q8N8A2 993 aa21.47■■□□□ 1.03
CCDC9-202ENST00000595659 RNF186Q9NXI6 227 aa21.47■■□□□ 1.03
CCDC9-202ENST00000595659 UTYO14607 1347 aa21.47■■□□□ 1.03
CCDC9-202ENST00000595659 PSME4Q14997 1843 aa21.46■■□□□ 1.03
CCDC9-202ENST00000595659 MMP14P50281 582 aa21.46■■□□□ 1.03
CCDC9-202ENST00000595659 MKRN3Q13064 507 aaKnown RBP21.46■■□□□ 1.03
CCDC9-202ENST00000595659 FZD1Q9UP38 647 aa21.46■■□□□ 1.03
CCDC9-202ENST00000595659 RIPOR2Q9Y4F9 1068 aa21.46■■□□□ 1.03
CCDC9-202ENST00000595659 PTPRCP08575 1304 aa21.46■■□□□ 1.03
CCDC9-202ENST00000595659 CLRN2A0PK11 232 aa21.45■■□□□ 1.02
CCDC9-202ENST00000595659 NF2P35240 595 aa21.45■■□□□ 1.02
CCDC9-202ENST00000595659 UBE4AQ14139 1066 aa21.45■■□□□ 1.02
CCDC9-202ENST00000595659 CFAP100Q494V2 611 aa21.45■■□□□ 1.02
CCDC9-202ENST00000595659 LRRC24Q50LG9 513 aa21.45■■□□□ 1.02
CCDC9-202ENST00000595659 APOBEC3FQ8IUX4 373 aaKnown RBP21.45■■□□□ 1.02
CCDC9-202ENST00000595659 KLHDC4Q8TBB5 520 aa21.45■■□□□ 1.02
CCDC9-202ENST00000595659 MCOLN1Q9GZU1 580 aa21.45■■□□□ 1.02
CCDC9-202ENST00000595659 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.45■■□□□ 1.02
CCDC9-202ENST00000595659 AOX1Q06278 1338 aa21.45■■□□□ 1.02
CCDC9-202ENST00000595659 CCDC85CA6NKD9 419 aa21.44■■□□□ 1.02
CCDC9-202ENST00000595659 HIBADHP31937 336 aaKnown RBP21.44■■□□□ 1.02
CCDC9-202ENST00000595659 RBM5P52756 815 aaKnown RBP eCLIP21.44■■□□□ 1.02
CCDC9-202ENST00000595659 RABL6Q3YEC7 729 aaPredicted RBP21.44■■□□□ 1.02
CCDC9-202ENST00000595659 FAM84BQ96KN1 310 aaPredicted RBP21.44■■□□□ 1.02
CCDC9-202ENST00000595659 PRMT6Q96LA8 375 aaPredicted RBP21.44■■□□□ 1.02
CCDC9-202ENST00000595659 USP44Q9H0E7 712 aa21.44■■□□□ 1.02
CCDC9-202ENST00000595659 SMC4Q9NTJ3 1288 aa21.44■■□□□ 1.02
CCDC9-202ENST00000595659 CACNA1FO60840 1977 aa21.44■■□□□ 1.02
CCDC9-202ENST00000595659 PTPN12Q05209 780 aaKnown RBP21.43■■□□□ 1.02
CCDC9-202ENST00000595659 METTL24Q5JXM2 366 aa21.43■■□□□ 1.02
CCDC9-202ENST00000595659 TDRD7Q8NHU6 1098 aaKnown RBP21.43■■□□□ 1.02
CCDC9-202ENST00000595659 DEFB129Q9H1M3 183 aa21.43■■□□□ 1.02
CCDC9-202ENST00000595659 IQSEC3Q9UPP2 1182 aaPredicted RBP21.43■■□□□ 1.02
CCDC9-202ENST00000595659 ZNF646O15015 1829 aaPredicted RBP21.42■■□□□ 1.02
CCDC9-202ENST00000595659 FKBP1AP62942 108 aaKnown RBP21.42■■□□□ 1.02
CCDC9-202ENST00000595659 DGKZQ13574 1117 aa21.42■■□□□ 1.02
CCDC9-202ENST00000595659 MTMR14Q8NCE2 650 aa21.42■■□□□ 1.02
CCDC9-202ENST00000595659 VEZTQ9HBM0 779 aa21.42■■□□□ 1.02
CCDC9-202ENST00000595659 SAGE1Q9NXZ1 904 aa21.42■■□□□ 1.02
CCDC9-202ENST00000595659 MROH5Q6ZUA9 1318 aa21.41■■□□□ 1.02
CCDC9-202ENST00000595659 SPDYE2BA6NHP3 402 aa21.41■■□□□ 1.02
CCDC9-202ENST00000595659 SPDYE6P0CI01 402 aa21.41■■□□□ 1.02
CCDC9-202ENST00000595659 MFSD14BQ5SR56 506 aa21.41■■□□□ 1.02
CCDC9-202ENST00000595659 ANGEL1Q9UNK9 670 aaKnown RBP21.41■■□□□ 1.02
CCDC9-202ENST00000595659 FAM205AQ6ZU69 1335 aa21.4■■□□□ 1.02
CCDC9-202ENST00000595659 CHAF1AQ13111 956 aaPredicted RBP21.4■■□□□ 1.02
CCDC9-202ENST00000595659 ALDH1L2Q3SY69 923 aa21.4■■□□□ 1.02
CCDC9-202ENST00000595659 ARMC9Q7Z3E5 817 aa21.4■■□□□ 1.02
CCDC9-202ENST00000595659 TRMT2AQ8IZ69 625 aaKnown RBP21.4■■□□□ 1.02
CCDC9-202ENST00000595659 PAPPA2Q9BXP8 1791 aa21.4■■□□□ 1.02
CCDC9-202ENST00000595659 MYO1BO43795 1136 aa21.39■■□□□ 1.01
CCDC9-202ENST00000595659 VPS37DQ86XT2 251 aa21.39■■□□□ 1.01
CCDC9-202ENST00000595659 TTF2Q9UNY4 1162 aaKnown RBP21.39■■□□□ 1.01
CCDC9-202ENST00000595659 GRIK5Q16478 980 aa21.38■■□□□ 1.01
CCDC9-202ENST00000595659 FBXO33Q7Z6M2 555 aa21.38■■□□□ 1.01
CCDC9-202ENST00000595659 NOB1Q9ULX3 412 aaKnown RBP21.38■■□□□ 1.01
CCDC9-202ENST00000595659 PDE8BO95263 885 aa21.37■■□□□ 1.01
CCDC9-202ENST00000595659 REM2Q8IYK8 340 aaPredicted RBP21.37■■□□□ 1.01
CCDC9-202ENST00000595659 FRAT2O75474 233 aaPredicted RBP21.36■■□□□ 1.01
CCDC9-202ENST00000595659 TBC1D8O95759 1140 aa21.36■■□□□ 1.01
CCDC9-202ENST00000595659 BCAMP50895 628 aa21.36■■□□□ 1.01
CCDC9-202ENST00000595659 LDLRAD1Q5T700 205 aa21.36■■□□□ 1.01
CCDC9-202ENST00000595659 NBPF12Q5TAG4 269 aaPredicted RBP21.36■■□□□ 1.01
CCDC9-202ENST00000595659 VGLL2Q8N8G2 317 aa21.36■■□□□ 1.01
CCDC9-202ENST00000595659 RASA3Q14644 834 aa21.35■■□□□ 1.01
CCDC9-202ENST00000595659 CAVIN4Q5BKX8 364 aa21.35■■□□□ 1.01
CCDC9-202ENST00000595659 TDRD3Q9H7E2 651 aaKnown RBP21.35■■□□□ 1.01
CCDC9-202ENST00000595659 CCER2I3L3R5 266 aa21.34■■□□□ 1.01
CCDC9-202ENST00000595659 RFX5P48382 616 aaPredicted RBP21.34■■□□□ 1.01
CCDC9-202ENST00000595659 SLC10A4Q96EP9 437 aa21.34■■□□□ 1.01
CCDC9-202ENST00000595659 CLMNQ96JQ2 1002 aa21.34■■□□□ 1.01
CCDC9-202ENST00000595659 ZNF70Q9UC06 446 aaPredicted RBP21.34■■□□□ 1.01
CCDC9-202ENST00000595659 PPP2R3BQ9Y5P8 575 aa21.34■■□□□ 1.01
CCDC9-202ENST00000595659 A0A1B0GUL6 1792 aa21.33■■□□□ 1.01
CCDC9-202ENST00000595659 PPP1R12BO60237 982 aaPredicted RBP21.33■■□□□ 1.01
CCDC9-202ENST00000595659 CRKP46108 304 aa21.33■■□□□ 1.01
CCDC9-202ENST00000595659 TM4SF4P48230 202 aa21.33■■□□□ 1.01
CCDC9-202ENST00000595659 SUPT20HL1Q3ZLR7 823 aa21.33■■□□□ 1.01
CCDC9-202ENST00000595659 SPRYD7Q5W111 196 aa21.33■■□□□ 1.01
CCDC9-202ENST00000595659 DZIP1LQ8IYY4 767 aaKnown RBP21.33■■□□□ 1.01
CCDC9-202ENST00000595659 SIL1Q9H173 461 aa21.33■■□□□ 1.01
CCDC9-202ENST00000595659 SERPINA10Q9UK55 444 aa21.33■■□□□ 1.01
CCDC9-202ENST00000595659 CASP8AP2Q9UKL3 1982 aa21.32■■□□□ 1
CCDC9-202ENST00000595659 SSC5DA1L4H1 1573 aa21.32■■□□□ 1
CCDC9-202ENST00000595659 TCP10L2B9ZVM9 353 aa21.32■■□□□ 1
CCDC9-202ENST00000595659 EYA2O00167 538 aa21.32■■□□□ 1
CCDC9-202ENST00000595659 UBTFL1P0CB47 393 aaPredicted RBP21.32■■□□□ 1
CCDC9-202ENST00000595659 SPDYE2Q495Y8 402 aa21.32■■□□□ 1
CCDC9-202ENST00000595659 CDAN1Q8IWY9 1227 aa21.32■■□□□ 1
CCDC9-202ENST00000595659 PUM3Q15397 648 aaKnown RBP21.31■■□□□ 1
CCDC9-202ENST00000595659 COL1A1P02452 1464 aaPredicted RBP21.31■■□□□ 1
CCDC9-202ENST00000595659 USP2O75604 605 aaPredicted RBP21.3■■□□□ 1
CCDC9-202ENST00000595659 IFIT1P09914 478 aaKnown RBP21.3■■□□□ 1
CCDC9-202ENST00000595659 CT47B1P0C2W7 299 aaPredicted RBP21.3■■□□□ 1
CCDC9-202ENST00000595659 FGFR2P21802 821 aa21.3■■□□□ 1
CCDC9-202ENST00000595659 SREBF2Q12772 1141 aa21.3■■□□□ 1
CCDC9-202ENST00000595659 ATG9AQ7Z3C6 839 aa21.3■■□□□ 1
CCDC9-202ENST00000595659 API5Q9BZZ5 524 aaKnown RBP21.3■■□□□ 1
CCDC9-202ENST00000595659 R3HDMLQ9H3Y0 253 aa21.3■■□□□ 1
CCDC9-202ENST00000595659 RARSP54136 660 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms