RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 ZNF652Q9Y2D9 606 aa20.11■□□□□ 0.81
SHKBP1-205ENST00000594973 CCDC102BQ68D86 513 aa20.11■□□□□ 0.81
SHKBP1-205ENST00000594973 Q6ZUG5 572 aa20.11■□□□□ 0.81
SHKBP1-205ENST00000594973 FAM184AQ8NB25 1140 aa20.11■□□□□ 0.81
SHKBP1-205ENST00000594973 SYAP1Q96A49 352 aaPredicted RBP20.11■□□□□ 0.81
SHKBP1-205ENST00000594973 MROH5Q6ZUA9 1318 aa20.11■□□□□ 0.81
SHKBP1-205ENST00000594973 CCDC152Q4G0S7 254 aa20.1■□□□□ 0.81
SHKBP1-205ENST00000594973 TTLL5Q6EMB2 1281 aa20.1■□□□□ 0.81
SHKBP1-205ENST00000594973 BICDL1Q6ZP65 573 aa20.1■□□□□ 0.81
SHKBP1-205ENST00000594973 PDCL2Q8N4E4 241 aa20.1■□□□□ 0.81
SHKBP1-205ENST00000594973 PUS7LQ9H0K6 701 aaKnown RBP20.1■□□□□ 0.81
SHKBP1-205ENST00000594973 ALDH8A1Q9H2A2 487 aaPredicted RBP20.1■□□□□ 0.81
SHKBP1-205ENST00000594973 NSFL1CQ9UNZ2 370 aaKnown RBP20.1■□□□□ 0.81
SHKBP1-205ENST00000594973 ZFYP08048 801 aaPredicted RBP20.1■□□□□ 0.81
SHKBP1-205ENST00000594973 LPIN2Q92539 896 aa20.1■□□□□ 0.81
SHKBP1-205ENST00000594973 SPEF2Q9C093 1822 aa20.09■□□□□ 0.81
SHKBP1-205ENST00000594973 HSP90B1P14625 803 aaKnown RBP20.09■□□□□ 0.81
SHKBP1-205ENST00000594973 FEZ1Q99689 392 aa20.09■□□□□ 0.81
SHKBP1-205ENST00000594973 BCL2L12Q9HB09 334 aa20.09■□□□□ 0.81
SHKBP1-205ENST00000594973 VPS37CA5D8V6 355 aaPredicted RBP20.09■□□□□ 0.81
SHKBP1-205ENST00000594973 TMEM51Q9NW97 253 aa20.09■□□□□ 0.81
SHKBP1-205ENST00000594973 ABCC12Q96J65 1359 aa20.09■□□□□ 0.81
SHKBP1-205ENST00000594973 IDH1O75874 414 aaKnown RBP20.08■□□□□ 0.81
SHKBP1-205ENST00000594973 PHF14O94880 888 aa20.08■□□□□ 0.81
SHKBP1-205ENST00000594973 APPBP2Q92624 585 aa20.08■□□□□ 0.81
SHKBP1-205ENST00000594973 BRF1Q92994 677 aa20.08■□□□□ 0.81
SHKBP1-205ENST00000594973 F13A1P00488 732 aa20.08■□□□□ 0.8
SHKBP1-205ENST00000594973 IGHMBP2P38935 993 aaKnown RBP20.08■□□□□ 0.8
SHKBP1-205ENST00000594973 SLC9C2Q5TAH2 1124 aa20.08■□□□□ 0.8
SHKBP1-205ENST00000594973 RNF214Q8ND24 703 aa20.08■□□□□ 0.8
SHKBP1-205ENST00000594973 ANKRD7Q92527 254 aa20.08■□□□□ 0.8
SHKBP1-205ENST00000594973 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.08■□□□□ 0.85e-7■■■■□ 23.7
SHKBP1-205ENST00000594973 PIH1D3Q9NQM4 214 aaKnown RBP20.08■□□□□ 0.8
SHKBP1-205ENST00000594973 RREB1Q92766 1687 aa20.07■□□□□ 0.8
SHKBP1-205ENST00000594973 E7EWF7 191 aa20.07■□□□□ 0.8
SHKBP1-205ENST00000594973 FGFR2P21802 821 aa20.07■□□□□ 0.8
SHKBP1-205ENST00000594973 HAND2P61296 217 aa20.07■□□□□ 0.8
SHKBP1-205ENST00000594973 FOXP2O15409 715 aa20.07■□□□□ 0.8
SHKBP1-205ENST00000594973 SLC5A1P13866 664 aa20.07■□□□□ 0.8
SHKBP1-205ENST00000594973 ERFEQ4G0M1 354 aa20.07■□□□□ 0.8
SHKBP1-205ENST00000594973 TPRNQ4KMQ1 711 aa20.07■□□□□ 0.8
SHKBP1-205ENST00000594973 MEX3CQ5U5Q3 659 aaKnown RBP20.07■□□□□ 0.8
SHKBP1-205ENST00000594973 LARP1BQ659C4 914 aaKnown RBP20.07■□□□□ 0.8
SHKBP1-205ENST00000594973 CHST3Q7LGC8 479 aa20.07■□□□□ 0.8
SHKBP1-205ENST00000594973 USP48Q86UV5 1035 aa20.07■□□□□ 0.8
SHKBP1-205ENST00000594973 TSC1Q92574 1164 aa20.07■□□□□ 0.8
SHKBP1-205ENST00000594973 ZNF512BQ96KM6 892 aaPredicted RBP20.07■□□□□ 0.8
SHKBP1-205ENST00000594973 MTMR6Q9Y217 621 aa20.07■□□□□ 0.8
SHKBP1-205ENST00000594973 CNPY2Q9Y2B0 182 aa20.07■□□□□ 0.8
SHKBP1-205ENST00000594973 CLEC4GQ6UXB4 293 aa20.06■□□□□ 0.8
SHKBP1-205ENST00000594973 DHX32Q7L7V1 743 aaKnown RBP20.06■□□□□ 0.8
SHKBP1-205ENST00000594973 GPAA1O43292 621 aa20.05■□□□□ 0.8
SHKBP1-205ENST00000594973 HMGB1P09429 215 aaKnown RBP20.05■□□□□ 0.8
SHKBP1-205ENST00000594973 EP400Q96L91 3159 aa20.05■□□□□ 0.8
SHKBP1-205ENST00000594973 GADD45BO75293 160 aaPredicted RBP20.05■□□□□ 0.8
SHKBP1-205ENST00000594973 ARID4AP29374 1257 aaPredicted RBP20.05■□□□□ 0.8
SHKBP1-205ENST00000594973 TTF1Q15361 905 aaPredicted RBP20.05■□□□□ 0.8
SHKBP1-205ENST00000594973 SPATA31A6Q5VVP1 1343 aa20.05■□□□□ 0.8
SHKBP1-205ENST00000594973 FGAP02671 866 aa20.04■□□□□ 0.8
SHKBP1-205ENST00000594973 UQCRFS1P1P0C7P4 283 aa20.04■□□□□ 0.8
SHKBP1-205ENST00000594973 COL5A3P25940 1745 aaPredicted RBP20.04■□□□□ 0.8
SHKBP1-205ENST00000594973 ADD2P35612 726 aa20.04■□□□□ 0.8
SHKBP1-205ENST00000594973 C3orf67Q6ZVT6 689 aa20.04■□□□□ 0.8
SHKBP1-205ENST00000594973 GTF3C6Q969F1 213 aa20.04■□□□□ 0.8
SHKBP1-205ENST00000594973 NAP1L2Q9ULW6 460 aaPredicted RBP20.04■□□□□ 0.8
SHKBP1-205ENST00000594973 LRP5O75197 1615 aa20.04■□□□□ 0.8
SHKBP1-205ENST00000594973 CICQ96RK0 1608 aaPredicted RBP20.04■□□□□ 0.8
SHKBP1-205ENST00000594973 GNPATO15228 680 aa20.03■□□□□ 0.8
SHKBP1-205ENST00000594973 JAK2O60674 1132 aa20.03■□□□□ 0.8
SHKBP1-205ENST00000594973 RASGRF1Q13972 1273 aa20.03■□□□□ 0.8
SHKBP1-205ENST00000594973 TBC1D9BQ66K14 1250 aa20.03■□□□□ 0.8
SHKBP1-205ENST00000594973 ZSCAN25Q6NSZ9 544 aa20.03■□□□□ 0.8
SHKBP1-205ENST00000594973 SPATA5Q8NB90 893 aa20.03■□□□□ 0.8
SHKBP1-205ENST00000594973 SRP68Q9UHB9 627 aaKnown RBP20.03■□□□□ 0.8
SHKBP1-205ENST00000594973 CTNNA3Q9UI47 895 aa20.03■□□□□ 0.8
SHKBP1-205ENST00000594973 CNTNAP4Q9C0A0 1308 aa20.03■□□□□ 0.8
SHKBP1-205ENST00000594973 AKAP11Q9UKA4 1901 aa20.03■□□□□ 0.8
SHKBP1-205ENST00000594973 GABPB1Q06547 395 aaPredicted RBP20.03■□□□□ 0.8
SHKBP1-205ENST00000594973 CHRNDQ07001 517 aa20.03■□□□□ 0.8
SHKBP1-205ENST00000594973 APOBRQ0VD83 1088 aa20.03■□□□□ 0.8
SHKBP1-205ENST00000594973 IMMTQ16891 758 aaKnown RBP20.03■□□□□ 0.8
SHKBP1-205ENST00000594973 IPO4Q8TEX9 1081 aaKnown RBP20.03■□□□□ 0.8
SHKBP1-205ENST00000594973 OGFRQ9NZT2 677 aa20.03■□□□□ 0.8
SHKBP1-205ENST00000594973 CCNL1Q9UK58 526 aaPredicted RBP20.03■□□□□ 0.8
SHKBP1-205ENST00000594973 WWC3Q9ULE0 1092 aa20.03■□□□□ 0.8
SHKBP1-205ENST00000594973 ATP6V1DQ9Y5K8 247 aa20.03■□□□□ 0.8
SHKBP1-205ENST00000594973 ZNF532Q9HCE3 1301 aa20.03■□□□□ 0.8
SHKBP1-205ENST00000594973 DDX60Q8IY21 1712 aaKnown RBP20.02■□□□□ 0.8
SHKBP1-205ENST00000594973 FIBPO43427 364 aa20.02■□□□□ 0.8
SHKBP1-205ENST00000594973 BCAMP50895 628 aa20.02■□□□□ 0.8
SHKBP1-205ENST00000594973 EXOSC10Q01780 885 aaKnown RBP20.02■□□□□ 0.8
SHKBP1-205ENST00000594973 CHAF1AQ13111 956 aaPredicted RBP20.02■□□□□ 0.8
SHKBP1-205ENST00000594973 FERMT3Q86UX7 667 aa20.02■□□□□ 0.8
SHKBP1-205ENST00000594973 KLHL34Q8N239 644 aa20.02■□□□□ 0.8
SHKBP1-205ENST00000594973 CTIFO43310 598 aaKnown RBP20.02■□□□□ 0.79
SHKBP1-205ENST00000594973 DNM1Q05193 864 aaKnown RBP20.02■□□□□ 0.79
SHKBP1-205ENST00000594973 CDC37L1Q7L3B6 337 aa20.02■□□□□ 0.79
SHKBP1-205ENST00000594973 PDE6AP16499 860 aa20.01■□□□□ 0.79
SHKBP1-205ENST00000594973 SCRN1Q12765 414 aa20.01■□□□□ 0.79
SHKBP1-205ENST00000594973 APPP05067 770 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms