RNA–Protein interactions for RNA: ENST00000594511.1

XRCC1-204, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 4

Gene XRCC1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-204ENST00000594511 GPBP1L1Q9HC44 474 aaPredicted RBP13.8□□□□□ -0.2
XRCC1-204ENST00000594511 GNL3LQ9NVN8 582 aaKnown RBP13.8□□□□□ -0.2
XRCC1-204ENST00000594511 DBNLQ9UJU6 430 aaKnown RBP13.8□□□□□ -0.2
XRCC1-204ENST00000594511 SUGT1Q9Y2Z0 365 aa13.8□□□□□ -0.2
XRCC1-204ENST00000594511 SALL1Q9NSC2 1324 aa13.8□□□□□ -0.2
XRCC1-204ENST00000594511 ADAMTSL1Q8N6G6 1762 aa13.79□□□□□ -0.2
XRCC1-204ENST00000594511 IGSF3O75054 1194 aa13.79□□□□□ -0.2
XRCC1-204ENST00000594511 IGHDP01880 384 aa13.79□□□□□ -0.2
XRCC1-204ENST00000594511 VPS37DQ86XT2 251 aa13.79□□□□□ -0.2
XRCC1-204ENST00000594511 CLASRPQ8N2M8 674 aaKnown RBP13.79□□□□□ -0.2
XRCC1-204ENST00000594511 TBC1D22AQ8WUA7 517 aa13.79□□□□□ -0.2
XRCC1-204ENST00000594511 NEUROD6Q96NK8 337 aa13.79□□□□□ -0.2
XRCC1-204ENST00000594511 DBNDD2Q9BQY9 259 aa13.79□□□□□ -0.2
XRCC1-204ENST00000594511 LRRCC1Q9C099 1032 aa13.79□□□□□ -0.2
XRCC1-204ENST00000594511 PGAP2Q9UHJ9 254 aa13.79□□□□□ -0.2
XRCC1-204ENST00000594511 CNOT7Q9UIV1 285 aaKnown RBP13.79□□□□□ -0.2
XRCC1-204ENST00000594511 HACL1Q9UJ83 578 aa13.79□□□□□ -0.2
XRCC1-204ENST00000594511 DENND2AQ9ULE3 1009 aa13.79□□□□□ -0.2
XRCC1-204ENST00000594511 ZBTB12Q9Y330 459 aaPredicted RBP13.79□□□□□ -0.2
XRCC1-204ENST00000594511 GJA3Q9Y6H8 435 aa13.79□□□□□ -0.2
XRCC1-204ENST00000594511 AKAP11Q9UKA4 1901 aa13.79□□□□□ -0.2
XRCC1-204ENST00000594511 COL1A1P02452 1464 aaPredicted RBP13.79□□□□□ -0.2
XRCC1-204ENST00000594511 UQCRFS1P1P0C7P4 283 aa13.78□□□□□ -0.2
XRCC1-204ENST00000594511 EPS15P42566 896 aa13.78□□□□□ -0.2
XRCC1-204ENST00000594511 IRX6P78412 446 aaPredicted RBP13.78□□□□□ -0.2
XRCC1-204ENST00000594511 MTMR14Q8NCE2 650 aa13.78□□□□□ -0.2
XRCC1-204ENST00000594511 WDR66Q8TBY9 1149 aa13.78□□□□□ -0.2
XRCC1-204ENST00000594511 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.78□□□□□ -0.2
XRCC1-204ENST00000594511 ZBED3Q96IU2 234 aaPredicted RBP13.78□□□□□ -0.2
XRCC1-204ENST00000594511 IL1RAPL2Q9NP60 686 aa13.78□□□□□ -0.2
XRCC1-204ENST00000594511 HDLBPQ00341 1268 aaKnown RBP13.77□□□□□ -0.21
XRCC1-204ENST00000594511 RASGRF1Q13972 1273 aa13.77□□□□□ -0.21
XRCC1-204ENST00000594511 USP50Q70EL3 339 aaPredicted RBP13.77□□□□□ -0.21
XRCC1-204ENST00000594511 MXD3Q9BW11 206 aa13.77□□□□□ -0.21
XRCC1-204ENST00000594511 CCDC8Q9H0W5 538 aaPredicted RBP13.77□□□□□ -0.21
XRCC1-204ENST00000594511 ADARB2Q9NS39 739 aaKnown RBP13.77□□□□□ -0.21
XRCC1-204ENST00000594511 TLR7Q9NYK1 1049 aaKnown RBP13.77□□□□□ -0.21
XRCC1-204ENST00000594511 MYH13Q9UKX3 1938 aa13.76□□□□□ -0.21
XRCC1-204ENST00000594511 SALL3Q9BXA9 1300 aa13.76□□□□□ -0.21
XRCC1-204ENST00000594511 USP17L8P0C7I0 530 aa13.76□□□□□ -0.21
XRCC1-204ENST00000594511 EPHX2P34913 555 aa13.76□□□□□ -0.21
XRCC1-204ENST00000594511 MCAMP43121 646 aa13.76□□□□□ -0.21
XRCC1-204ENST00000594511 HIRAP54198 1017 aaPredicted RBP13.76□□□□□ -0.21
XRCC1-204ENST00000594511 CCDC158Q5M9N0 1113 aa13.76□□□□□ -0.21
XRCC1-204ENST00000594511 AACSQ86V21 672 aa13.76□□□□□ -0.21
XRCC1-204ENST00000594511 PNMA8AQ86V59 439 aaPredicted RBP13.76□□□□□ -0.21
XRCC1-204ENST00000594511 MICALL2Q8IY33 904 aa13.76□□□□□ -0.21
XRCC1-204ENST00000594511 HMG20BQ9P0W2 317 aa13.76□□□□□ -0.21
XRCC1-204ENST00000594511 SHTN1A0MZ66 631 aa13.75□□□□□ -0.21
XRCC1-204ENST00000594511 H7C1D1 291 aa13.75□□□□□ -0.21
XRCC1-204ENST00000594511 LMOD1P29536 600 aaPredicted RBP13.75□□□□□ -0.21
XRCC1-204ENST00000594511 SCARF1Q14162 830 aa13.75□□□□□ -0.21
XRCC1-204ENST00000594511 MFSD14BQ5SR56 506 aa13.75□□□□□ -0.21
XRCC1-204ENST00000594511 ERICH6BQ5W0A0 696 aa13.75□□□□□ -0.21
XRCC1-204ENST00000594511 ZNF526Q8TF50 670 aaPredicted RBP13.75□□□□□ -0.21
XRCC1-204ENST00000594511 ZC3H15Q8WU90 426 aaKnown RBP13.75□□□□□ -0.21
XRCC1-204ENST00000594511 IQSEC3Q9UPP2 1182 aaPredicted RBP13.75□□□□□ -0.21
XRCC1-204ENST00000594511 SMARCA5O60264 1052 aaPredicted RBP13.74□□□□□ -0.21
XRCC1-204ENST00000594511 TOMM70O94826 608 aa13.74□□□□□ -0.21
XRCC1-204ENST00000594511 ATP5JP18859 108 aa13.74□□□□□ -0.21
XRCC1-204ENST00000594511 GRIK5Q16478 980 aa13.74□□□□□ -0.21
XRCC1-204ENST00000594511 GORABQ5T7V8 394 aa13.74□□□□□ -0.21
XRCC1-204ENST00000594511 SPATA5Q8NB90 893 aa13.74□□□□□ -0.21
XRCC1-204ENST00000594511 RBM46Q8TBY0 533 aaKnown RBP13.74□□□□□ -0.21
XRCC1-204ENST00000594511 FRAT2O75474 233 aaPredicted RBP13.73□□□□□ -0.21
XRCC1-204ENST00000594511 EGFRP00533 1210 aa13.73□□□□□ -0.21
XRCC1-204ENST00000594511 IFIT2P09913 472 aaKnown RBP13.73□□□□□ -0.21
XRCC1-204ENST00000594511 NUCB1Q02818 461 aa13.73□□□□□ -0.21
XRCC1-204ENST00000594511 LDHDQ86WU2 507 aa13.73□□□□□ -0.21
XRCC1-204ENST00000594511 KIAA0825Q8IV33 1275 aa13.73□□□□□ -0.21
XRCC1-204ENST00000594511 ZGPATQ8N5A5 531 aaKnown RBP13.73□□□□□ -0.21
XRCC1-204ENST00000594511 TRPM4Q8TD43 1214 aa13.73□□□□□ -0.21
XRCC1-204ENST00000594511 FAM163AQ96GL9 167 aaPredicted RBP13.73□□□□□ -0.21
XRCC1-204ENST00000594511 STAP2Q9UGK3 403 aa13.73□□□□□ -0.21
XRCC1-204ENST00000594511 SERPINA10Q9UK55 444 aa13.73□□□□□ -0.21
XRCC1-204ENST00000594511 APBB1O00213 710 aa13.72□□□□□ -0.21
XRCC1-204ENST00000594511 CHAF1AQ13111 956 aaPredicted RBP13.72□□□□□ -0.21
XRCC1-204ENST00000594511 TTC39AQ5SRH9 613 aa13.72□□□□□ -0.21
XRCC1-204ENST00000594511 TMED8Q6PL24 325 aaPredicted RBP13.72□□□□□ -0.21
XRCC1-204ENST00000594511 HHIPL2Q6UWX4 724 aa13.72□□□□□ -0.21
XRCC1-204ENST00000594511 SAMD7Q7Z3H4 446 aa13.72□□□□□ -0.21
XRCC1-204ENST00000594511 OGFOD1Q8N543 542 aa13.72□□□□□ -0.21
XRCC1-204ENST00000594511 MYOZ2Q9NPC6 264 aa13.72□□□□□ -0.21
XRCC1-204ENST00000594511 HDAC9Q9UKV0 1011 aa13.72□□□□□ -0.21
XRCC1-204ENST00000594511 JAG2Q9Y219 1238 aa13.72□□□□□ -0.21
XRCC1-204ENST00000594511 MAST3O60307 1309 aa13.71□□□□□ -0.21
XRCC1-204ENST00000594511 TTC41PQ6P2S7 1318 aa13.71□□□□□ -0.21
XRCC1-204ENST00000594511 CYP2E1P05181 493 aaPredicted RBP13.71□□□□□ -0.21
XRCC1-204ENST00000594511 POTEIP0CG38 1075 aa13.71□□□□□ -0.21
XRCC1-204ENST00000594511 POTEJP0CG39 1038 aa13.71□□□□□ -0.21
XRCC1-204ENST00000594511 FSTL1Q12841 308 aa13.71□□□□□ -0.21
XRCC1-204ENST00000594511 KIF4BQ2VIQ3 1234 aa13.71□□□□□ -0.21
XRCC1-204ENST00000594511 ANKRD45Q5TZF3 282 aa13.71□□□□□ -0.21
XRCC1-204ENST00000594511 SPTY2D1Q68D10 685 aaPredicted RBP13.71□□□□□ -0.21
XRCC1-204ENST00000594511 PI16Q6UXB8 463 aa13.71□□□□□ -0.21
XRCC1-204ENST00000594511 C16orf71Q8IYS4 520 aaPredicted RBP13.71□□□□□ -0.21
XRCC1-204ENST00000594511 ZNF384Q8TF68 577 aa13.71□□□□□ -0.21
XRCC1-204ENST00000594511 TTF2Q9UNY4 1162 aaKnown RBP13.71□□□□□ -0.21
XRCC1-204ENST00000594511 PITPNM2Q9BZ72 1349 aa13.7□□□□□ -0.22
XRCC1-204ENST00000594511 WNT10BO00744 389 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms