RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 TBC1D16Q8TBP0 767 aa25.02■■□□□ 1.6
PNKP-203ENST00000593946 POLLQ9UGP5 575 aa25.02■■□□□ 1.6
PNKP-203ENST00000593946 MAST3O60307 1309 aa25.01■■□□□ 1.59
PNKP-203ENST00000593946 APPBP2Q92624 585 aa25.01■■□□□ 1.59
PNKP-203ENST00000593946 MAP4K1Q92918 833 aa25.01■■□□□ 1.59
PNKP-203ENST00000593946 IL17RAQ96F46 866 aa25.01■■□□□ 1.59
PNKP-203ENST00000593946 CCDC88AQ3V6T2 1871 aa25■■□□□ 1.59
PNKP-203ENST00000593946 KIAA1551Q9HCM1 1747 aa25■■□□□ 1.59
PNKP-203ENST00000593946 ANAPC15P60006 121 aa25■■□□□ 1.59
PNKP-203ENST00000593946 SLC9C2Q5TAH2 1124 aa25■■□□□ 1.59
PNKP-203ENST00000593946 PRPF40BQ6NWY9 871 aaKnown RBP25■■□□□ 1.59
PNKP-203ENST00000593946 CCDC129Q6ZRS4 1044 aa25■■□□□ 1.59
PNKP-203ENST00000593946 CNKSR1Q969H4 720 aa25■■□□□ 1.59
PNKP-203ENST00000593946 OSBP2Q969R2 916 aa25■■□□□ 1.59
PNKP-203ENST00000593946 MAP3K12Q12852 859 aa25■■□□□ 1.59
PNKP-203ENST00000593946 UBE3CQ15386 1083 aa25■■□□□ 1.59
PNKP-203ENST00000593946 ZNF804AQ7Z570 1209 aa25■■□□□ 1.59
PNKP-203ENST00000593946 GPR101Q96P66 508 aaPredicted RBP25■■□□□ 1.59
PNKP-203ENST00000593946 WWC3Q9ULE0 1092 aa25■■□□□ 1.59
PNKP-203ENST00000593946 PALD1Q9ULE6 856 aa25■■□□□ 1.59
PNKP-203ENST00000593946 PDE6AP16499 860 aa24.99■■□□□ 1.59
PNKP-203ENST00000593946 WASHC4Q2M389 1173 aa24.99■■□□□ 1.59
PNKP-203ENST00000593946 TCRBV5S4A2TA0A5A2 114 aa24.98■■□□□ 1.59
PNKP-203ENST00000593946 M0R2C6 588 aa24.98■■□□□ 1.59
PNKP-203ENST00000593946 OLFM4Q6UX06 510 aa24.98■■□□□ 1.59
PNKP-203ENST00000593946 MAST2Q6P0Q8 1798 aa24.98■■□□□ 1.59
PNKP-203ENST00000593946 FRAT2O75474 233 aaPredicted RBP24.98■■□□□ 1.59
PNKP-203ENST00000593946 RABEP1Q15276 862 aa24.98■■□□□ 1.59
PNKP-203ENST00000593946 MPNDQ8N594 471 aa24.98■■□□□ 1.59
PNKP-203ENST00000593946 TDRD7Q8NHU6 1098 aaKnown RBP24.98■■□□□ 1.59
PNKP-203ENST00000593946 RBM8AQ9Y5S9 174 aaKnown RBP24.98■■□□□ 1.59
PNKP-203ENST00000593946 CHD4Q14839 1912 aa24.97■■□□□ 1.59
PNKP-203ENST00000593946 C6orf229H3BNL8 230 aa24.97■■□□□ 1.59
PNKP-203ENST00000593946 NECTIN1Q15223 517 aa24.97■■□□□ 1.59
PNKP-203ENST00000593946 TMX4Q9H1E5 349 aaPredicted RBP24.97■■□□□ 1.59
PNKP-203ENST00000593946 ATF5Q9Y2D1 282 aaPredicted RBP24.97■■□□□ 1.59
PNKP-203ENST00000593946 ZNF532Q9HCE3 1301 aa24.96■■□□□ 1.59
PNKP-203ENST00000593946 POLD1P28340 1107 aa24.96■■□□□ 1.59
PNKP-203ENST00000593946 PUS7LQ9H0K6 701 aaKnown RBP24.96■■□□□ 1.59
PNKP-203ENST00000593946 LRP2BPQ9P2M1 347 aa24.96■■□□□ 1.59
PNKP-203ENST00000593946 DPP8Q6V1X1 898 aaPredicted RBP24.95■■□□□ 1.59
PNKP-203ENST00000593946 KCNB2Q92953 911 aa24.95■■□□□ 1.59
PNKP-203ENST00000593946 MAGEB6Q8N7X4 407 aa24.95■■□□□ 1.58
PNKP-203ENST00000593946 C7orf43Q8WVR3 580 aa24.95■■□□□ 1.58
PNKP-203ENST00000593946 DSCC1Q9BVC3 393 aa24.95■■□□□ 1.58
PNKP-203ENST00000593946 BRCA1P38398 1863 aaKnown RBP24.94■■□□□ 1.58
PNKP-203ENST00000593946 SNED1Q8TER0 1413 aa24.94■■□□□ 1.58
PNKP-203ENST00000593946 IL1R1P14778 569 aa24.94■■□□□ 1.58
PNKP-203ENST00000593946 BECN1Q14457 450 aa24.94■■□□□ 1.58
PNKP-203ENST00000593946 CD209Q9NNX6 404 aa24.94■■□□□ 1.58
PNKP-203ENST00000593946 ABCF2Q9UG63 623 aa24.94■■□□□ 1.58
PNKP-203ENST00000593946 RASEFQ8IZ41 740 aa24.93■■□□□ 1.58
PNKP-203ENST00000593946 SNX21Q969T3 373 aa24.93■■□□□ 1.58
PNKP-203ENST00000593946 SGIP1Q9BQI5 828 aa24.93■■□□□ 1.58
PNKP-203ENST00000593946 TBC1D2Q9BYX2 928 aa24.93■■□□□ 1.58
PNKP-203ENST00000593946 SNX14Q9Y5W7 946 aa24.93■■□□□ 1.58
PNKP-203ENST00000593946 KCNA3P22001 575 aa24.92■■□□□ 1.58
PNKP-203ENST00000593946 VPS53Q5VIR6 699 aa24.92■■□□□ 1.58
PNKP-203ENST00000593946 U3KPZ7 1027 aaPredicted RBP24.92■■□□□ 1.58
PNKP-203ENST00000593946 SALL1Q9NSC2 1324 aa24.92■■□□□ 1.58
PNKP-203ENST00000593946 GPAA1O43292 621 aa24.92■■□□□ 1.58
PNKP-203ENST00000593946 HSPD1P10809 573 aaKnown RBP24.92■■□□□ 1.58
PNKP-203ENST00000593946 CHAF1AQ13111 956 aaPredicted RBP24.92■■□□□ 1.58
PNKP-203ENST00000593946 CREB3L3Q68CJ9 461 aa24.92■■□□□ 1.58
PNKP-203ENST00000593946 PSDA5PKW4 1024 aaPredicted RBP24.91■■□□□ 1.58
PNKP-203ENST00000593946 DPEP1P16444 411 aa24.91■■□□□ 1.58
PNKP-203ENST00000593946 TTLL6Q8N841 843 aa24.91■■□□□ 1.58
PNKP-203ENST00000593946 SLC27A2O14975 620 aa24.9■■□□□ 1.58
PNKP-203ENST00000593946 CC2D2BQ6DHV5 1058 aa24.9■■□□□ 1.58
PNKP-203ENST00000593946 WDR66Q8TBY9 1149 aa24.9■■□□□ 1.58
PNKP-203ENST00000593946 RAI14Q9P0K7 980 aa24.9■■□□□ 1.58
PNKP-203ENST00000593946 A0A0G2JLW4 131 aa24.89■■□□□ 1.58
PNKP-203ENST00000593946 FOXP2O15409 715 aa24.89■■□□□ 1.58
PNKP-203ENST00000593946 TGFB2P61812 414 aa24.89■■□□□ 1.58
PNKP-203ENST00000593946 RNF20Q5VTR2 975 aa24.89■■□□□ 1.58
PNKP-203ENST00000593946 ZGPATQ8N5A5 531 aaKnown RBP24.89■■□□□ 1.58
PNKP-203ENST00000593946 RTFDC1Q9BY42 306 aaPredicted RBP24.89■■□□□ 1.58
PNKP-203ENST00000593946 ERICH6Q7L0X2 663 aa24.89■■□□□ 1.57
PNKP-203ENST00000593946 EYA3Q99504 573 aa24.89■■□□□ 1.57
PNKP-203ENST00000593946 ZC3H12CQ9C0D7 883 aaKnown RBP24.89■■□□□ 1.57
PNKP-203ENST00000593946 COA1Q9GZY4 146 aa24.89■■□□□ 1.57
PNKP-203ENST00000593946 IGSF3O75054 1194 aa24.88■■□□□ 1.57
PNKP-203ENST00000593946 CD2BP2O95400 341 aaKnown RBP24.88■■□□□ 1.57
PNKP-203ENST00000593946 ZKSCAN1P17029 563 aaPredicted RBP24.88■■□□□ 1.57
PNKP-203ENST00000593946 SLC4A3P48751 1232 aa24.88■■□□□ 1.57
PNKP-203ENST00000593946 ZNF384Q8TF68 577 aa24.88■■□□□ 1.57
PNKP-203ENST00000593946 GOLGB1Q14789 3259 aaKnown RBP24.87■■□□□ 1.57
PNKP-203ENST00000593946 RIMBP2O15034 1052 aa24.87■■□□□ 1.57
PNKP-203ENST00000593946 PRDX5P30044 214 aa24.87■■□□□ 1.57
PNKP-203ENST00000593946 TMED8Q6PL24 325 aaPredicted RBP24.87■■□□□ 1.57
PNKP-203ENST00000593946 HSCBQ8IWL3 235 aa24.87■■□□□ 1.57
PNKP-203ENST00000593946 AIDAQ96BJ3 306 aa24.87■■□□□ 1.57
PNKP-203ENST00000593946 NSUN4Q96CB9 384 aaKnown RBP24.87■■□□□ 1.57
PNKP-203ENST00000593946 ZNF219Q9P2Y4 722 aaPredicted RBP24.87■■□□□ 1.57
PNKP-203ENST00000593946 DAXXQ9UER7 740 aaPredicted RBP24.87■■□□□ 1.57
PNKP-203ENST00000593946 JAG2Q9Y219 1238 aa24.87■■□□□ 1.57
PNKP-203ENST00000593946 LAMA4Q16363 1823 aa24.87■■□□□ 1.57
PNKP-203ENST00000593946 CYP7A1P22680 504 aa24.86■■□□□ 1.57
PNKP-203ENST00000593946 TSGA10IPQ3SY00 556 aa24.86■■□□□ 1.57
PNKP-203ENST00000593946 SPTY2D1Q68D10 685 aaPredicted RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms