RNA–Protein interactions for RNA: ENST00000592051.1

CIRBP-236, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-236	ENST00000592051	VIL1	P09327	827 aa	Known RBP	13.88	□□□□□ -0.19
CIRBP-236	ENST00000592051	UQCRFS1P1	P0C7P4	283 aa		13.88	□□□□□ -0.19
CIRBP-236	ENST00000592051	MX1	P20591	662 aa		13.88	□□□□□ -0.19
CIRBP-236	ENST00000592051	PDE1A	P54750	535 aa		13.88	□□□□□ -0.19
CIRBP-236	ENST00000592051	CHAF1A	Q13111	956 aa	Predicted RBP	13.88	□□□□□ -0.19
CIRBP-236	ENST00000592051	CCDC158	Q5M9N0	1113 aa		13.88	□□□□□ -0.19
CIRBP-236	ENST00000592051	TTC39A	Q5SRH9	613 aa		13.88	□□□□□ -0.19
CIRBP-236	ENST00000592051	DCAF8	Q5TAQ9	597 aa		13.88	□□□□□ -0.19
CIRBP-236	ENST00000592051	GML	Q99445	158 aa		13.88	□□□□□ -0.19
CIRBP-236	ENST00000592051	SBF1	O95248	1867 aa		13.88	□□□□□ -0.19
CIRBP-236	ENST00000592051	USP17L3	A6NCW0	530 aa		13.87	□□□□□ -0.19
CIRBP-236	ENST00000592051	USP17L4	A6NCW7	530 aa		13.87	□□□□□ -0.19
CIRBP-236	ENST00000592051	SEMA3E	O15041	775 aa		13.87	□□□□□ -0.19
CIRBP-236	ENST00000592051	ZAP70	P43403	619 aa		13.87	□□□□□ -0.19
CIRBP-236	ENST00000592051	STRIP1	Q5VSL9	837 aa		13.87	□□□□□ -0.19
CIRBP-236	ENST00000592051	TTLL5	Q6EMB2	1281 aa		13.87	□□□□□ -0.19
CIRBP-236	ENST00000592051	CIAPIN1	Q6FI81	312 aa		13.87	□□□□□ -0.19
CIRBP-236	ENST00000592051	USP17L1	Q7RTZ2	530 aa		13.87	□□□□□ -0.19
CIRBP-236	ENST00000592051	SPATA5	Q8NB90	893 aa		13.87	□□□□□ -0.19
CIRBP-236	ENST00000592051	EDC3	Q96F86	508 aa	Known RBP	13.87	□□□□□ -0.19
CIRBP-236	ENST00000592051	GNL3L	Q9NVN8	582 aa	Known RBP	13.87	□□□□□ -0.19
CIRBP-236	ENST00000592051	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.87	□□□□□ -0.19
CIRBP-236	ENST00000592051	SCN9A	Q15858	1988 aa		13.87	□□□□□ -0.19
CIRBP-236	ENST00000592051	UTRN	P46939	3433 aa		13.87	□□□□□ -0.19
CIRBP-236	ENST00000592051	PDS5A	Q29RF7	1337 aa	Known RBP	13.87	□□□□□ -0.19
CIRBP-236	ENST00000592051	DDN	O94850	711 aa	Predicted RBP	13.86	□□□□□ -0.19
CIRBP-236	ENST00000592051	CYP2E1	P05181	493 aa	Predicted RBP	13.86	□□□□□ -0.19
CIRBP-236	ENST00000592051	TBC1D9	Q6ZT07	1266 aa		13.86	□□□□□ -0.19
CIRBP-236	ENST00000592051	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
CIRBP-236	ENST00000592051	BOLA2	Q9H3K6	86 aa		13.86	□□□□□ -0.19
CIRBP-236	ENST00000592051	OSBPL3	Q9H4L5	887 aa		13.86	□□□□□ -0.19
CIRBP-236	ENST00000592051	ANTXR1	Q9H6X2	564 aa		13.86	□□□□□ -0.19
CIRBP-236	ENST00000592051	PIH1D3	Q9NQM4	214 aa	Known RBP	13.86	□□□□□ -0.19
CIRBP-236	ENST00000592051	DENND2A	Q9ULE3	1009 aa		13.86	□□□□□ -0.19
CIRBP-236	ENST00000592051	TTC41P	Q6P2S7	1318 aa		13.86	□□□□□ -0.19
CIRBP-236	ENST00000592051	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.86	□□□□□ -0.19
CIRBP-236	ENST00000592051	SHTN1	A0MZ66	631 aa		13.85	□□□□□ -0.19
CIRBP-236	ENST00000592051	GMPS	P49915	693 aa	Predicted RBP	13.85	□□□□□ -0.19
CIRBP-236	ENST00000592051	EIF6	P56537	245 aa	Known RBP	13.85	□□□□□ -0.19
CIRBP-236	ENST00000592051	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.85	□□□□□ -0.19
CIRBP-236	ENST00000592051	HAUS7	Q99871	368 aa		13.85	□□□□□ -0.19
CIRBP-236	ENST00000592051	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.85	□□□□□ -0.19
CIRBP-236	ENST00000592051	GJA3	Q9Y6H8	435 aa		13.85	□□□□□ -0.19
CIRBP-236	ENST00000592051	CHD4	Q14839	1912 aa		13.85	□□□□□ -0.19
CIRBP-236	ENST00000592051	GLTPD2	A6NH11	291 aa		13.84	□□□□□ -0.19
CIRBP-236	ENST00000592051	POTEC	B2RU33	542 aa		13.84	□□□□□ -0.19
CIRBP-236	ENST00000592051	FRAT2	O75474	233 aa	Predicted RBP	13.84	□□□□□ -0.19
CIRBP-236	ENST00000592051	FKBP1A	P62942	108 aa	Known RBP	13.84	□□□□□ -0.19
CIRBP-236	ENST00000592051	TNIP1	Q15025	636 aa		13.84	□□□□□ -0.19
CIRBP-236	ENST00000592051	GPC2	Q8N158	579 aa		13.84	□□□□□ -0.19
CIRBP-236	ENST00000592051	ZNF384	Q8TF68	577 aa		13.84	□□□□□ -0.19
CIRBP-236	ENST00000592051	FBXW7	Q969H0	707 aa		13.84	□□□□□ -0.19
CIRBP-236	ENST00000592051	ZNF646	O15015	1829 aa	Predicted RBP	13.84	□□□□□ -0.19
CIRBP-236	ENST00000592051	SALL1	Q9NSC2	1324 aa		13.84	□□□□□ -0.19
CIRBP-236	ENST00000592051	PRDX5	P30044	214 aa		13.83	□□□□□ -0.2
CIRBP-236	ENST00000592051	SCNN1D	P51172	638 aa		13.83	□□□□□ -0.2
CIRBP-236	ENST00000592051	MFSD14B	Q5SR56	506 aa		13.83	□□□□□ -0.2
CIRBP-236	ENST00000592051	WDR66	Q8TBY9	1149 aa		13.83	□□□□□ -0.2
CIRBP-236	ENST00000592051	AOX1	Q06278	1338 aa		13.83	□□□□□ -0.2
CIRBP-236	ENST00000592051	TIAM2	Q8IVF5	1701 aa		13.82	□□□□□ -0.2
CIRBP-236	ENST00000592051	GOLIM4	O00461	696 aa		13.82	□□□□□ -0.2
CIRBP-236	ENST00000592051	GLRX3	O76003	335 aa	Known RBP	13.82	□□□□□ -0.2
CIRBP-236	ENST00000592051	MAP4K4	O95819	1239 aa	Predicted RBP	13.82	□□□□□ -0.2
CIRBP-236	ENST00000592051	GSPT1	P15170	499 aa	Known RBP	13.82	□□□□□ -0.2
CIRBP-236	ENST00000592051	GPATCH3	Q96I76	525 aa		13.82	□□□□□ -0.2
CIRBP-236	ENST00000592051	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.82	□□□□□ -0.2
CIRBP-236	ENST00000592051	DNAJC2	Q99543	621 aa	Known RBP	13.82	□□□□□ -0.2
CIRBP-236	ENST00000592051	DICER1	Q9UPY3	1922 aa	Known RBP	13.82	□□□□□ -0.2
CIRBP-236	ENST00000592051	CCDC88A	Q3V6T2	1871 aa		13.81	□□□□□ -0.2
CIRBP-236	ENST00000592051	CHGB	P05060	677 aa		13.81	□□□□□ -0.2
CIRBP-236	ENST00000592051	ZNF280A	P59817	542 aa	Predicted RBP	13.81	□□□□□ -0.2
CIRBP-236	ENST00000592051	KIAA0825	Q8IV33	1275 aa		13.81	□□□□□ -0.2
CIRBP-236	ENST00000592051	AGBL3	Q8NEM8	1001 aa		13.81	□□□□□ -0.2
CIRBP-236	ENST00000592051	TBC1D22A	Q8WUA7	517 aa		13.81	□□□□□ -0.2
CIRBP-236	ENST00000592051	DPF2	Q92785	391 aa		13.81	□□□□□ -0.2
CIRBP-236	ENST00000592051	PAG1	Q9NWQ8	432 aa		13.81	□□□□□ -0.2
CIRBP-236	ENST00000592051	PCDHAC2	Q9Y5I4	1007 aa		13.81	□□□□□ -0.2
CIRBP-236	ENST00000592051	AKAP11	Q9UKA4	1901 aa		13.8	□□□□□ -0.2
CIRBP-236	ENST00000592051		F8W031	263 aa	Predicted RBP	13.8	□□□□□ -0.2
CIRBP-236	ENST00000592051	ERC2	O15083	957 aa		13.8	□□□□□ -0.2
CIRBP-236	ENST00000592051	EGFR	P00533	1210 aa		13.8	□□□□□ -0.2
CIRBP-236	ENST00000592051	RPS12	P25398	132 aa	Known RBP	13.8	□□□□□ -0.2
CIRBP-236	ENST00000592051	EPS15	P42566	896 aa		13.8	□□□□□ -0.2
CIRBP-236	ENST00000592051	SLFNL1	Q499Z3	407 aa		13.8	□□□□□ -0.2
CIRBP-236	ENST00000592051	GPRC5D	Q9NZD1	345 aa		13.8	□□□□□ -0.2
CIRBP-236	ENST00000592051	ABCF2	Q9UG63	623 aa		13.8	□□□□□ -0.2
CIRBP-236	ENST00000592051	RGS3	P49796	1198 aa		13.79	□□□□□ -0.2
CIRBP-236	ENST00000592051	MECOM	Q03112	1051 aa		13.79	□□□□□ -0.2
CIRBP-236	ENST00000592051	TTC22	Q5TAA0	569 aa		13.79	□□□□□ -0.2
CIRBP-236	ENST00000592051	DPY19L2	Q6NUT2	758 aa		13.79	□□□□□ -0.2
CIRBP-236	ENST00000592051	MICALL2	Q8IY33	904 aa		13.79	□□□□□ -0.2
CIRBP-236	ENST00000592051	CNOT7	Q9UIV1	285 aa	Known RBP	13.79	□□□□□ -0.2
CIRBP-236	ENST00000592051	SUGT1	Q9Y2Z0	365 aa		13.79	□□□□□ -0.2
CIRBP-236	ENST00000592051	MYO3B	Q8WXR4	1341 aa		13.79	□□□□□ -0.2
CIRBP-236	ENST00000592051	LDHB	P07195	334 aa	Known RBP	13.78	□□□□□ -0.2
CIRBP-236	ENST00000592051	USP17L8	P0C7I0	530 aa		13.78	□□□□□ -0.2
CIRBP-236	ENST00000592051	DIXDC1	Q155Q3	683 aa		13.78	□□□□□ -0.2
CIRBP-236	ENST00000592051	ADGRA1	Q86SQ6	560 aa		13.78	□□□□□ -0.2
CIRBP-236	ENST00000592051	NSUN4	Q96CB9	384 aa	Known RBP	13.78	□□□□□ -0.2
CIRBP-236	ENST00000592051	ZBED3	Q96IU2	234 aa	Predicted RBP	13.78	□□□□□ -0.2

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