RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 CASP7P55210 303 aa13.31□□□□□ -0.28
VPS4B-207ENST00000591519 FLIIQ13045 1269 aa13.31□□□□□ -0.28
VPS4B-207ENST00000591519 NOGQ13253 232 aa13.31□□□□□ -0.28
VPS4B-207ENST00000591519 GRM1Q13255 1194 aa13.31□□□□□ -0.28
VPS4B-207ENST00000591519 KIF4BQ2VIQ3 1234 aa13.31□□□□□ -0.28
VPS4B-207ENST00000591519 DLK2Q6UY11 383 aa13.31□□□□□ -0.28
VPS4B-207ENST00000591519 USP17L3A6NCW0 530 aa13.3□□□□□ -0.28
VPS4B-207ENST00000591519 USP17L4A6NCW7 530 aa13.3□□□□□ -0.28
VPS4B-207ENST00000591519 WTIPA6NIX2 430 aaPredicted RBP13.3□□□□□ -0.28
VPS4B-207ENST00000591519 HUNKP57058 714 aa13.3□□□□□ -0.28
VPS4B-207ENST00000591519 USP17L1Q7RTZ2 530 aa13.3□□□□□ -0.28
VPS4B-207ENST00000591519 UBE3BQ7Z3V4 1068 aa13.3□□□□□ -0.28
VPS4B-207ENST00000591519 C2orf69Q8N8R5 385 aa13.3□□□□□ -0.28
VPS4B-207ENST00000591519 LINS1Q8NG48 757 aa13.3□□□□□ -0.28
VPS4B-207ENST00000591519 GBA2Q9HCG7 927 aaPredicted RBP13.3□□□□□ -0.28
VPS4B-207ENST00000591519 MRS2Q9HD23 443 aa13.3□□□□□ -0.28
VPS4B-207ENST00000591519 LEMD3Q9Y2U8 911 aa13.3□□□□□ -0.28
VPS4B-207ENST00000591519 MED23Q9ULK4 1368 aa13.3□□□□□ -0.28
VPS4B-207ENST00000591519 PSME4Q14997 1843 aa13.29□□□□□ -0.28
VPS4B-207ENST00000591519 MYH3P11055 1940 aa13.29□□□□□ -0.28
VPS4B-207ENST00000591519 USP17L8P0C7I0 530 aa13.29□□□□□ -0.28
VPS4B-207ENST00000591519 MMP14P50281 582 aa13.29□□□□□ -0.28
VPS4B-207ENST00000591519 CCT4P50991 539 aaKnown RBP13.29□□□□□ -0.28
VPS4B-207ENST00000591519 RGMBQ6NW40 437 aa13.29□□□□□ -0.28
VPS4B-207ENST00000591519 SULF1Q8IWU6 871 aa13.29□□□□□ -0.28
VPS4B-207ENST00000591519 DNAAF4Q8WXU2 420 aa13.29□□□□□ -0.28
VPS4B-207ENST00000591519 CCDC102AQ96A19 550 aa13.29□□□□□ -0.28
VPS4B-207ENST00000591519 MS4A4AQ96JQ5 239 aa13.29□□□□□ -0.28
VPS4B-207ENST00000591519 FANCIQ9NVI1 1328 aa13.29□□□□□ -0.28
VPS4B-207ENST00000591519 FAM155AB1AL88 458 aaPredicted RBP13.28□□□□□ -0.28
VPS4B-207ENST00000591519 ADM5C9JUS6 153 aa13.28□□□□□ -0.28
VPS4B-207ENST00000591519 IGHMBP2P38935 993 aaKnown RBP13.28□□□□□ -0.28
VPS4B-207ENST00000591519 SCARF1Q14162 830 aa13.28□□□□□ -0.28
VPS4B-207ENST00000591519 ABHD8Q96I13 439 aa13.28□□□□□ -0.28
VPS4B-207ENST00000591519 KRTAP3-3Q9BYR6 98 aa13.28□□□□□ -0.28
VPS4B-207ENST00000591519 KRTAP3-2Q9BYR7 98 aa13.28□□□□□ -0.28
VPS4B-207ENST00000591519 COA1Q9GZY4 146 aa13.28□□□□□ -0.28
VPS4B-207ENST00000591519 MYH16Q9H6N6 1097 aa13.28□□□□□ -0.28
VPS4B-207ENST00000591519 MYOZ2Q9NPC6 264 aa13.28□□□□□ -0.28
VPS4B-207ENST00000591519 GGA3Q9NZ52 723 aa13.28□□□□□ -0.28
VPS4B-207ENST00000591519 ITGA6P23229 1130 aa13.27□□□□□ -0.29
VPS4B-207ENST00000591519 FKBP5Q13451 457 aaPredicted RBP13.27□□□□□ -0.29
VPS4B-207ENST00000591519 DACT2Q5SW24 774 aa13.27□□□□□ -0.29
VPS4B-207ENST00000591519 STRIP1Q5VSL9 837 aa13.27□□□□□ -0.29
VPS4B-207ENST00000591519 TMEM92Q6UXU6 159 aa13.27□□□□□ -0.29
VPS4B-207ENST00000591519 TXNRD3Q86VQ6 643 aa13.27□□□□□ -0.29
VPS4B-207ENST00000591519 ZNF710Q8N1W2 664 aa13.27□□□□□ -0.29
VPS4B-207ENST00000591519 ZIC5Q96T25 663 aa13.27□□□□□ -0.29
VPS4B-207ENST00000591519 ANKRD2Q9GZV1 360 aa13.27□□□□□ -0.29
VPS4B-207ENST00000591519 ASTN2O75129 1339 aaPredicted RBP13.27□□□□□ -0.29
VPS4B-207ENST00000591519 PITPNM2Q9BZ72 1349 aa13.27□□□□□ -0.29
VPS4B-207ENST00000591519 FKBP1BP68106 108 aa13.26□□□□□ -0.29
VPS4B-207ENST00000591519 EXOSC9Q06265 439 aaKnown RBP13.26□□□□□ -0.29
VPS4B-207ENST00000591519 ANGEL2Q5VTE6 544 aaKnown RBP13.26□□□□□ -0.29
VPS4B-207ENST00000591519 CDCA5Q96FF9 252 aa13.26□□□□□ -0.29
VPS4B-207ENST00000591519 ZNF804BA4D1E1 1349 aa13.25□□□□□ -0.29
VPS4B-207ENST00000591519 MYO3BQ8WXR4 1341 aa13.25□□□□□ -0.29
VPS4B-207ENST00000591519 FOXO4P98177 505 aa13.25□□□□□ -0.29
VPS4B-207ENST00000591519 BEND3Q5T5X7 828 aa13.25□□□□□ -0.29
VPS4B-207ENST00000591519 MPHOSPH8Q99549 860 aa13.25□□□□□ -0.29
VPS4B-207ENST00000591519 TSKSQ9UJT2 592 aa13.25□□□□□ -0.29
VPS4B-207ENST00000591519 ZNF157P51786 506 aaPredicted RBP13.24□□□□□ -0.29
VPS4B-207ENST00000591519 KIF23Q02241 960 aaPredicted RBP13.24□□□□□ -0.29
VPS4B-207ENST00000591519 FAM161AQ3B820 660 aa13.24□□□□□ -0.29
VPS4B-207ENST00000591519 TTLL5Q6EMB2 1281 aa13.24□□□□□ -0.29
VPS4B-207ENST00000591519 C15orf52Q6ZUT6 534 aaKnown RBP13.24□□□□□ -0.29
VPS4B-207ENST00000591519 OGFOD1Q8N543 542 aa13.24□□□□□ -0.29
VPS4B-207ENST00000591519 SAGE1Q9NXZ1 904 aa13.24□□□□□ -0.29
VPS4B-207ENST00000591519 SALL2Q9Y467 1007 aaPredicted RBP13.24□□□□□ -0.29
VPS4B-207ENST00000591519 ANKRD18BA2A2Z9 1011 aa13.23□□□□□ -0.29
VPS4B-207ENST00000591519 WNT10BO00744 389 aa13.23□□□□□ -0.29
VPS4B-207ENST00000591519 SLC10A3P09131 477 aa13.23□□□□□ -0.29
VPS4B-207ENST00000591519 CHRNDQ07001 517 aa13.23□□□□□ -0.29
VPS4B-207ENST00000591519 NBPF9Q3BBW0 867 aa13.23□□□□□ -0.29
VPS4B-207ENST00000591519 MXD3Q9BW11 206 aa13.23□□□□□ -0.29
VPS4B-207ENST00000591519 IRS2Q9Y4H2 1338 aa13.22□□□□□ -0.29
VPS4B-207ENST00000591519 CASP8AP2Q9UKL3 1982 aa13.22□□□□□ -0.29
VPS4B-207ENST00000591519 F6X3S4 739 aa13.22□□□□□ -0.29
VPS4B-207ENST00000591519 IFIT5Q13325 482 aaKnown RBP13.22□□□□□ -0.29
VPS4B-207ENST00000591519 CSRNP1Q96S65 589 aa13.22□□□□□ -0.29
VPS4B-207ENST00000591519 CD209Q9NNX6 404 aa13.22□□□□□ -0.29
VPS4B-207ENST00000591519 ZNF646O15015 1829 aaPredicted RBP13.22□□□□□ -0.29
VPS4B-207ENST00000591519 SPEF2Q9C093 1822 aa13.22□□□□□ -0.29
VPS4B-207ENST00000591519 HOXB1P14653 301 aaPredicted RBP13.21□□□□□ -0.29
VPS4B-207ENST00000591519 KLRK1P26718 216 aa13.21□□□□□ -0.29
VPS4B-207ENST00000591519 RGS19P49795 217 aa13.21□□□□□ -0.29
VPS4B-207ENST00000591519 FAM9BQ8IZU0 186 aa13.21□□□□□ -0.29
VPS4B-207ENST00000591519 ZBED3Q96IU2 234 aaPredicted RBP13.21□□□□□ -0.29
VPS4B-207ENST00000591519 RNF186Q9NXI6 227 aa13.21□□□□□ -0.29
VPS4B-207ENST00000591519 GRM8O00222 908 aa13.2□□□□□ -0.3
VPS4B-207ENST00000591519 ALDH1L1O75891 902 aa13.2□□□□□ -0.3
VPS4B-207ENST00000591519 IL1R1P14778 569 aa13.2□□□□□ -0.3
VPS4B-207ENST00000591519 GTF2IP78347 998 aa13.2□□□□□ -0.3
VPS4B-207ENST00000591519 LMBR1LQ6UX01 489 aa13.2□□□□□ -0.3
VPS4B-207ENST00000591519 ZNF521Q96K83 1311 aa13.19□□□□□ -0.3
VPS4B-207ENST00000591519 TAF5LO75529 589 aa13.19□□□□□ -0.3
VPS4B-207ENST00000591519 KCNJ4P48050 445 aa13.19□□□□□ -0.3
VPS4B-207ENST00000591519 FKBP1AP62942 108 aaKnown RBP13.19□□□□□ -0.3
VPS4B-207ENST00000591519 EPHA10Q5JZY3 1008 aa13.19□□□□□ -0.3
VPS4B-207ENST00000591519 RASAL3Q86YV0 1011 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms