RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM7-206	ENST00000591515	TRIM27	P14373	513 aa		29.02	■■■□□ 2.24
LSM7-206	ENST00000591515	HABP4	Q5JVS0	413 aa	Known RBP	29.02	■■■□□ 2.24
LSM7-206	ENST00000591515	WNT10B	O00744	389 aa		29.01	■■■□□ 2.23
LSM7-206	ENST00000591515	ATP2B4	P23634	1241 aa		29.01	■■■□□ 2.23
LSM7-206	ENST00000591515	PTPN12	Q05209	780 aa	Known RBP	29.01	■■■□□ 2.23
LSM7-206	ENST00000591515	PLA2G12B	Q9BX93	195 aa		29.01	■■■□□ 2.23
LSM7-206	ENST00000591515	MED23	Q9ULK4	1368 aa		29.01	■■■□□ 2.23
LSM7-206	ENST00000591515	BRCA2	P51587	3418 aa		29	■■■□□ 2.23
LSM7-206	ENST00000591515	NF2	P35240	595 aa		29	■■■□□ 2.23
LSM7-206	ENST00000591515	DACT2	Q5SW24	774 aa		29	■■■□□ 2.23
LSM7-206	ENST00000591515	JARID2	Q92833	1246 aa	Predicted RBP	29	■■■□□ 2.23
LSM7-206	ENST00000591515	INTS3	Q68E01	1043 aa	Known RBP	28.99	■■■□□ 2.23
LSM7-206	ENST00000591515	ANKRD18A	Q8IVF6	992 aa		28.99	■■■□□ 2.23
LSM7-206	ENST00000591515	ECM29	Q5VYK3	1845 aa		28.99	■■■□□ 2.23
LSM7-206	ENST00000591515	SASH1	O94885	1247 aa		28.98	■■■□□ 2.23
LSM7-206	ENST00000591515	CTSW	P56202	376 aa		28.98	■■■□□ 2.23
LSM7-206	ENST00000591515	PRKG1	Q13976	671 aa		28.98	■■■□□ 2.23
LSM7-206	ENST00000591515	DZIP1L	Q8IYY4	767 aa	Known RBP	28.98	■■■□□ 2.23
LSM7-206	ENST00000591515	UTY	O14607	1347 aa		28.97	■■■□□ 2.23
LSM7-206	ENST00000591515	POTEF	A5A3E0	1075 aa		28.97	■■■□□ 2.23
LSM7-206	ENST00000591515	CASP7	P55210	303 aa		28.97	■■■□□ 2.23
LSM7-206	ENST00000591515	SPRYD7	Q5W111	196 aa		28.96	■■■□□ 2.23
LSM7-206	ENST00000591515	ARMC9	Q7Z3E5	817 aa		28.96	■■■□□ 2.23
LSM7-206	ENST00000591515	CLUAP1	Q96AJ1	413 aa		28.96	■■■□□ 2.23
LSM7-206	ENST00000591515	LDLRAD1	Q5T700	205 aa		28.95	■■■□□ 2.22
LSM7-206	ENST00000591515	OGFOD1	Q8N543	542 aa		28.95	■■■□□ 2.22
LSM7-206	ENST00000591515	TRIM17	Q9Y577	477 aa		28.95	■■■□□ 2.22
LSM7-206	ENST00000591515	OTOP1	Q7RTM1	612 aa		28.94	■■■□□ 2.22
LSM7-206	ENST00000591515	FBXW7	Q969H0	707 aa		28.94	■■■□□ 2.22
LSM7-206	ENST00000591515	MYO3B	Q8WXR4	1341 aa		28.94	■■■□□ 2.22
LSM7-206	ENST00000591515	GNAI3	P08754	354 aa		28.93	■■■□□ 2.22
LSM7-206	ENST00000591515	UBTFL1	P0CB47	393 aa	Predicted RBP	28.93	■■■□□ 2.22
LSM7-206	ENST00000591515	CDC5L	Q99459	802 aa	Known RBP	28.93	■■■□□ 2.22
LSM7-206	ENST00000591515	USP44	Q9H0E7	712 aa		28.93	■■■□□ 2.22
LSM7-206	ENST00000591515	FZD1	Q9UP38	647 aa		28.93	■■■□□ 2.22
LSM7-206	ENST00000591515	ALDH1A1	P00352	501 aa		28.92	■■■□□ 2.22
LSM7-206	ENST00000591515	STRIP1	Q5VSL9	837 aa		28.92	■■■□□ 2.22
LSM7-206	ENST00000591515	TTLL11	Q8NHH1	800 aa		28.92	■■■□□ 2.22
LSM7-206	ENST00000591515	ANGEL1	Q9UNK9	670 aa	Known RBP	28.92	■■■□□ 2.22
LSM7-206	ENST00000591515	MINPP1	Q9UNW1	487 aa		28.92	■■■□□ 2.22
LSM7-206	ENST00000591515	NBPF7	P0C2Y1	421 aa	Predicted RBP	28.91	■■■□□ 2.22
LSM7-206	ENST00000591515	APOBEC3F	Q8IUX4	373 aa	Known RBP	28.91	■■■□□ 2.22
LSM7-206	ENST00000591515	SSC5D	A1L4H1	1573 aa		28.9	■■■□□ 2.22
LSM7-206	ENST00000591515	TXNRD3	Q86VQ6	643 aa		28.9	■■■□□ 2.22
LSM7-206	ENST00000591515	IFNL1	Q8IU54	200 aa		28.9	■■■□□ 2.22
LSM7-206	ENST00000591515	MANSC4	A6NHS7	340 aa	Predicted RBP	28.89	■■■□□ 2.22
LSM7-206	ENST00000591515	CSF1R	P07333	972 aa		28.89	■■■□□ 2.22
LSM7-206	ENST00000591515	TMEM57	Q8N5G2	664 aa		28.89	■■■□□ 2.22
LSM7-206	ENST00000591515	ZBED3	Q96IU2	234 aa	Predicted RBP	28.89	■■■□□ 2.22
LSM7-206	ENST00000591515	COA1	Q9GZY4	146 aa		28.89	■■■□□ 2.22
LSM7-206	ENST00000591515	CHMP4B	Q9H444	224 aa	Known RBP	28.89	■■■□□ 2.22
LSM7-206	ENST00000591515	CHMP3	Q9Y3E7	222 aa		28.89	■■■□□ 2.22
LSM7-206	ENST00000591515	COL1A1	P02452	1464 aa	Predicted RBP	28.89	■■■□□ 2.22
LSM7-206	ENST00000591515	IGF2BP3	O00425	579 aa	Known RBP eCLIP	28.88	■■■□□ 2.21
LSM7-206	ENST00000591515	ITPRIP	Q8IWB1	547 aa		28.88	■■■□□ 2.21
LSM7-206	ENST00000591515	SUCLG2	Q96I99	432 aa		28.88	■■■□□ 2.21
LSM7-206	ENST00000591515	BSDC1	Q9NW68	430 aa	Predicted RBP	28.88	■■■□□ 2.21
LSM7-206	ENST00000591515	ANKRD18B	A2A2Z9	1011 aa		28.87	■■■□□ 2.21
LSM7-206	ENST00000591515	FOXO4	P98177	505 aa		28.87	■■■□□ 2.21
LSM7-206	ENST00000591515	IFIT5	Q13325	482 aa	Known RBP	28.87	■■■□□ 2.21
LSM7-206	ENST00000591515	KIAA0825	Q8IV33	1275 aa		28.87	■■■□□ 2.21
LSM7-206	ENST00000591515	OTOF	Q9HC10	1997 aa		28.87	■■■□□ 2.21
LSM7-206	ENST00000591515	IGHMBP2	P38935	993 aa	Known RBP	28.86	■■■□□ 2.21
LSM7-206	ENST00000591515	MMP14	P50281	582 aa		28.86	■■■□□ 2.21
LSM7-206	ENST00000591515	PDE3A	Q14432	1141 aa		28.86	■■■□□ 2.21
LSM7-206	ENST00000591515	CCDC57	Q2TAC2	916 aa		28.86	■■■□□ 2.21
LSM7-206	ENST00000591515	LMBR1L	Q6UX01	489 aa		28.86	■■■□□ 2.21
LSM7-206	ENST00000591515	CLMN	Q96JQ2	1002 aa		28.86	■■■□□ 2.21
LSM7-206	ENST00000591515	GREM2	Q9H772	168 aa		28.86	■■■□□ 2.21
LSM7-206	ENST00000591515	TNN	Q9UQP3	1299 aa		28.86	■■■□□ 2.21
LSM7-206	ENST00000591515	INHBE	P58166	350 aa		28.85	■■■□□ 2.21
LSM7-206	ENST00000591515	SLC10A4	Q96EP9	437 aa		28.85	■■■□□ 2.21
LSM7-206	ENST00000591515	WNK4	Q96J92	1243 aa		28.85	■■■□□ 2.21
LSM7-206	ENST00000591515	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	28.85	■■■□□ 2.21
LSM7-206	ENST00000591515	CEP290	O15078	2479 aa		28.84	■■■□□ 2.21
LSM7-206	ENST00000591515	ZBTB48	P10074	688 aa	Predicted RBP	28.84	■■■□□ 2.21
LSM7-206	ENST00000591515	ITGA6	P23229	1130 aa		28.84	■■■□□ 2.21
LSM7-206	ENST00000591515	KLRK1	P26718	216 aa		28.84	■■■□□ 2.21
LSM7-206	ENST00000591515	FXR1	P51114	621 aa	Known RBP eCLIP	28.84	■■■□□ 2.21
LSM7-206	ENST00000591515	MAP3K11	Q16584	847 aa		28.84	■■■□□ 2.21
LSM7-206	ENST00000591515	TAF7L	Q5H9L4	462 aa		28.84	■■■□□ 2.21
LSM7-206	ENST00000591515	TTLL5	Q6EMB2	1281 aa		28.84	■■■□□ 2.21
LSM7-206	ENST00000591515	PTPN22	Q9Y2R2	807 aa		28.84	■■■□□ 2.21
LSM7-206	ENST00000591515		A0A1B0GUL6	1792 aa		28.83	■■■□□ 2.21
LSM7-206	ENST00000591515	CD99L2	Q8TCZ2	262 aa		28.83	■■■□□ 2.21
LSM7-206	ENST00000591515	MEIS3	Q99687	375 aa		28.83	■■■□□ 2.21
LSM7-206	ENST00000591515	DEFB129	Q9H1M3	183 aa		28.83	■■■□□ 2.21
LSM7-206	ENST00000591515	BICC1	Q9H694	974 aa	Known RBP	28.83	■■■□□ 2.21
LSM7-206	ENST00000591515	RABL6	Q3YEC7	729 aa	Predicted RBP	28.82	■■■□□ 2.2
LSM7-206	ENST00000591515	ARMC5	Q96C12	935 aa		28.82	■■■□□ 2.2
LSM7-206	ENST00000591515	ERO1A	Q96HE7	468 aa		28.82	■■■□□ 2.2
LSM7-206	ENST00000591515	MPHOSPH8	Q99549	860 aa		28.82	■■■□□ 2.2
LSM7-206	ENST00000591515	PLIN1	O60240	522 aa		28.81	■■■□□ 2.2
LSM7-206	ENST00000591515	GNAI2	P04899	355 aa		28.81	■■■□□ 2.2
LSM7-206	ENST00000591515	EN2	P19622	333 aa	Predicted RBP	28.81	■■■□□ 2.2
LSM7-206	ENST00000591515	EPHA10	Q5JZY3	1008 aa		28.81	■■■□□ 2.2
LSM7-206	ENST00000591515	PANK1	Q8TE04	598 aa		28.81	■■■□□ 2.2
LSM7-206	ENST00000591515	DDX19B	Q9UMR2	479 aa		28.81	■■■□□ 2.2
LSM7-206	ENST00000591515	LEMD3	Q9Y2U8	911 aa		28.81	■■■□□ 2.2
LSM7-206	ENST00000591515	RLBP1	P12271	317 aa		28.8	■■■□□ 2.2

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms