RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 CSF1RP07333 972 aa20.35■□□□□ 0.85
DDX39A-216ENST00000591275 TWISTNBQ3B726 338 aaPredicted RBP20.35■□□□□ 0.85
DDX39A-216ENST00000591275 OTOP1Q7RTM1 612 aa20.35■□□□□ 0.85
DDX39A-216ENST00000591275 AOX1Q06278 1338 aa20.34■□□□□ 0.85
DDX39A-216ENST00000591275 POTEFA5A3E0 1075 aa20.34■□□□□ 0.85
DDX39A-216ENST00000591275 PPP1R12BO60237 982 aaPredicted RBP20.34■□□□□ 0.85
DDX39A-216ENST00000591275 ZBTB48P10074 688 aaPredicted RBP20.34■□□□□ 0.85
DDX39A-216ENST00000591275 INHBEP58166 350 aa20.34■□□□□ 0.85
DDX39A-216ENST00000591275 MAP3K11Q16584 847 aa20.34■□□□□ 0.85
DDX39A-216ENST00000591275 JAG2Q9Y219 1238 aa20.34■□□□□ 0.85
DDX39A-216ENST00000591275 ECM29Q5VYK3 1845 aa20.34■□□□□ 0.85
DDX39A-216ENST00000591275 IRS2Q9Y4H2 1338 aa20.33■□□□□ 0.85
DDX39A-216ENST00000591275 ANKRD18BA2A2Z9 1011 aa20.33■□□□□ 0.85
DDX39A-216ENST00000591275 CFAP100Q494V2 611 aa20.33■□□□□ 0.85
DDX39A-216ENST00000591275 NBPF12Q5TAG4 269 aaPredicted RBP20.33■□□□□ 0.85
DDX39A-216ENST00000591275 MTMR14Q8NCE2 650 aa20.33■□□□□ 0.85
DDX39A-216ENST00000591275 MYH16Q9H6N6 1097 aa20.33■□□□□ 0.85
DDX39A-216ENST00000591275 VEZTQ9HBM0 779 aa20.33■□□□□ 0.85
DDX39A-216ENST00000591275 SPDYE2BA6NHP3 402 aa20.32■□□□□ 0.84
DDX39A-216ENST00000591275 MYO1BO43795 1136 aa20.32■□□□□ 0.84
DDX39A-216ENST00000591275 SPDYE6P0CI01 402 aa20.32■□□□□ 0.84
DDX39A-216ENST00000591275 FLIIQ13045 1269 aa20.32■□□□□ 0.84
DDX39A-216ENST00000591275 FKBP5Q13451 457 aaPredicted RBP20.32■□□□□ 0.84
DDX39A-216ENST00000591275 PRMT6Q96LA8 375 aaPredicted RBP20.32■□□□□ 0.84
DDX39A-216ENST00000591275 PPP2R3BQ9Y5P8 575 aa20.32■□□□□ 0.84
DDX39A-216ENST00000591275 GJA5P36382 358 aa20.31■□□□□ 0.84
DDX39A-216ENST00000591275 SUPT20HL1Q3ZLR7 823 aa20.31■□□□□ 0.84
DDX39A-216ENST00000591275 CD99L2Q8TCZ2 262 aa20.31■□□□□ 0.84
DDX39A-216ENST00000591275 DNAAF4Q8WXU2 420 aa20.31■□□□□ 0.84
DDX39A-216ENST00000591275 CHMP3Q9Y3E7 222 aa20.31■□□□□ 0.84
DDX39A-216ENST00000591275 A0A1B0GUL6 1792 aa20.31■□□□□ 0.84
DDX39A-216ENST00000591275 RBM5P52756 815 aaKnown RBP eCLIP20.3■□□□□ 0.84
DDX39A-216ENST00000591275 CRHR2Q13324 411 aa20.3■□□□□ 0.84
DDX39A-216ENST00000591275 ZNF804AQ7Z570 1209 aa20.3■□□□□ 0.84
DDX39A-216ENST00000591275 LINS1Q8NG48 757 aa20.3■□□□□ 0.84
DDX39A-216ENST00000591275 GCC1Q96CN9 775 aa20.3■□□□□ 0.84
DDX39A-216ENST00000591275 ERO1AQ96HE7 468 aa20.3■□□□□ 0.84
DDX39A-216ENST00000591275 LAMB1P07942 1786 aa20.3■□□□□ 0.84
DDX39A-216ENST00000591275 BRCA2P51587 3418 aa20.3■□□□□ 0.84
DDX39A-216ENST00000591275 USP2O75604 605 aaPredicted RBP20.29■□□□□ 0.84
DDX39A-216ENST00000591275 IL1R1P14778 569 aa20.29■□□□□ 0.84
DDX39A-216ENST00000591275 IREB2P48200 963 aaKnown RBP20.29■□□□□ 0.84
DDX39A-216ENST00000591275 IFIT5Q13325 482 aaKnown RBP20.29■□□□□ 0.84
DDX39A-216ENST00000591275 INTS3Q68E01 1043 aaKnown RBP20.29■□□□□ 0.84
DDX39A-216ENST00000591275 C15orf52Q6ZUT6 534 aaKnown RBP20.29■□□□□ 0.84
DDX39A-216ENST00000591275 PTPN22Q9Y2R2 807 aa20.29■□□□□ 0.84
DDX39A-216ENST00000591275 PLIN1O60240 522 aa20.28■□□□□ 0.84
DDX39A-216ENST00000591275 FOXO4P98177 505 aa20.28■□□□□ 0.84
DDX39A-216ENST00000591275 RASA3Q14644 834 aa20.28■□□□□ 0.84
DDX39A-216ENST00000591275 OTUD7BQ6GQQ9 843 aa20.28■□□□□ 0.84
DDX39A-216ENST00000591275 WWC1Q8IX03 1113 aa20.28■□□□□ 0.84
DDX39A-216ENST00000591275 PTPN18Q99952 460 aa20.28■□□□□ 0.84
DDX39A-216ENST00000591275 CAP1Q01518 475 aa20.27■□□□□ 0.84
DDX39A-216ENST00000591275 HABP4Q5JVS0 413 aaKnown RBP20.27■□□□□ 0.84
DDX39A-216ENST00000591275 ANKRD13AQ8IZ07 590 aa20.27■□□□□ 0.84
DDX39A-216ENST00000591275 ELP3Q9H9T3 547 aa20.27■□□□□ 0.84
DDX39A-216ENST00000591275 EFCC1Q9HA90 598 aa20.27■□□□□ 0.84
DDX39A-216ENST00000591275 OTOFQ9HC10 1997 aa20.26■□□□□ 0.83
DDX39A-216ENST00000591275 CEP290O15078 2479 aa20.26■□□□□ 0.83
DDX39A-216ENST00000591275 UNCXA6NJT0 531 aa20.26■□□□□ 0.83
DDX39A-216ENST00000591275 FKBP1AP62942 108 aaKnown RBP20.26■□□□□ 0.83
DDX39A-216ENST00000591275 ZNF594Q96JF6 807 aaPredicted RBP20.26■□□□□ 0.83
DDX39A-216ENST00000591275 EN2P19622 333 aaPredicted RBP20.25■□□□□ 0.83
DDX39A-216ENST00000591275 SP3Q02447 781 aa20.25■□□□□ 0.83
DDX39A-216ENST00000591275 CCDC184Q52MB2 194 aa20.25■□□□□ 0.83
DDX39A-216ENST00000591275 RBBP6Q7Z6E9 1792 aaKnown RBP20.24■□□□□ 0.83
DDX39A-216ENST00000591275 F6X3S4 739 aa20.24■□□□□ 0.83
DDX39A-216ENST00000591275 CCDC27Q2M243 656 aa20.24■□□□□ 0.83
DDX39A-216ENST00000591275 EPHA10Q5JZY3 1008 aa20.24■□□□□ 0.83
DDX39A-216ENST00000591275 LMBR1LQ6UX01 489 aa20.24■□□□□ 0.83
DDX39A-216ENST00000591275 CDAN1Q8IWY9 1227 aa20.24■□□□□ 0.83
DDX39A-216ENST00000591275 ARMC5Q96C12 935 aa20.24■□□□□ 0.83
DDX39A-216ENST00000591275 OPTNQ96CV9 577 aa20.24■□□□□ 0.83
DDX39A-216ENST00000591275 ZNF70Q9UC06 446 aaPredicted RBP20.24■□□□□ 0.83
DDX39A-216ENST00000591275 TESPA1A2RU30 521 aaPredicted RBP20.23■□□□□ 0.83
DDX39A-216ENST00000591275 TAF7LQ5H9L4 462 aa20.23■□□□□ 0.83
DDX39A-216ENST00000591275 LDHAL6AQ6ZMR3 332 aa20.23■□□□□ 0.83
DDX39A-216ENST00000591275 CNKSR2Q8WXI2 1034 aa20.23■□□□□ 0.83
DDX39A-216ENST00000591275 TDRD3Q9H7E2 651 aaKnown RBP20.23■□□□□ 0.83
DDX39A-216ENST00000591275 FANCIQ9NVI1 1328 aa20.23■□□□□ 0.83
DDX39A-216ENST00000591275 CACNA1FO60840 1977 aa20.23■□□□□ 0.83
DDX39A-216ENST00000591275 CCDC57Q2TAC2 916 aa20.22■□□□□ 0.83
DDX39A-216ENST00000591275 SPDYE2Q495Y8 402 aa20.22■□□□□ 0.83
DDX39A-216ENST00000591275 MFSD14BQ5SR56 506 aa20.22■□□□□ 0.83
DDX39A-216ENST00000591275 MS4A4AQ96JQ5 239 aa20.22■□□□□ 0.83
DDX39A-216ENST00000591275 CNNM1Q9NRU3 951 aa20.22■□□□□ 0.83
DDX39A-216ENST00000591275 TTF2Q9UNY4 1162 aaKnown RBP20.22■□□□□ 0.83
DDX39A-216ENST00000591275 TCP10L2B9ZVM9 353 aa20.21■□□□□ 0.83
DDX39A-216ENST00000591275 GYG1P46976 350 aa20.21■□□□□ 0.83
DDX39A-216ENST00000591275 TNFAIP1Q13829 316 aa20.21■□□□□ 0.83
DDX39A-216ENST00000591275 BEND3Q5T5X7 828 aa20.21■□□□□ 0.83
DDX39A-216ENST00000591275 BRI3BPQ8WY22 251 aa20.21■□□□□ 0.83
DDX39A-216ENST00000591275 IL16Q14005 1332 aa20.21■□□□□ 0.83
DDX39A-216ENST00000591275 FAM205AQ6ZU69 1335 aa20.21■□□□□ 0.83
DDX39A-216ENST00000591275 VAMP4O75379 141 aa20.2■□□□□ 0.82
DDX39A-216ENST00000591275 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.2■□□□□ 0.82
DDX39A-216ENST00000591275 TEPSINQ96N21 525 aa20.2■□□□□ 0.82
DDX39A-216ENST00000591275 CCL15-CCL14A0A0B4J2E2 113 aa20.19■□□□□ 0.82
DDX39A-216ENST00000591275 VGLL4Q14135 290 aa20.19■□□□□ 0.82
DDX39A-216ENST00000591275 TAF1CQ15572 869 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms