RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 USP17L1Q7RTZ2 530 aa16.63■□□□□ 0.25
VMP1-210ENST00000589823 OTUD7AQ8TE49 926 aaPredicted RBP16.63■□□□□ 0.25
VMP1-210ENST00000589823 ATP5JP18859 108 aa16.62■□□□□ 0.25
VMP1-210ENST00000589823 STRIP1Q5VSL9 837 aa16.62■□□□□ 0.25
VMP1-210ENST00000589823 SPATA5Q8NB90 893 aa16.62■□□□□ 0.25
VMP1-210ENST00000589823 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.62■□□□□ 0.25
VMP1-210ENST00000589823 KCNQ5Q9NR82 932 aa16.62■□□□□ 0.25
VMP1-210ENST00000589823 HMG20BQ9P0W2 317 aa16.62■□□□□ 0.25
VMP1-210ENST00000589823 STAP2Q9UGK3 403 aa16.62■□□□□ 0.25
VMP1-210ENST00000589823 FAM205AQ6ZU69 1335 aa16.62■□□□□ 0.25
VMP1-210ENST00000589823 SALL3Q9BXA9 1300 aa16.62■□□□□ 0.25
VMP1-210ENST00000589823 TIAM2Q8IVF5 1701 aa16.62■□□□□ 0.25
VMP1-210ENST00000589823 GLRX3O76003 335 aaKnown RBP16.61■□□□□ 0.25
VMP1-210ENST00000589823 PDE4AP27815 886 aa16.61■□□□□ 0.25
VMP1-210ENST00000589823 MCAMP43121 646 aa16.61■□□□□ 0.25
VMP1-210ENST00000589823 PDE1AP54750 535 aa16.61■□□□□ 0.25
VMP1-210ENST00000589823 CXCL9Q07325 125 aa16.61■□□□□ 0.25
VMP1-210ENST00000589823 SCARF1Q14162 830 aa16.61■□□□□ 0.25
VMP1-210ENST00000589823 TSHZ3Q63HK5 1081 aa16.61■□□□□ 0.25
VMP1-210ENST00000589823 DPY19L2Q6NUT2 758 aa16.61■□□□□ 0.25
VMP1-210ENST00000589823 WDR66Q8TBY9 1149 aa16.61■□□□□ 0.25
VMP1-210ENST00000589823 TBC1D22AQ8WUA7 517 aa16.61■□□□□ 0.25
VMP1-210ENST00000589823 BOLA2Q9H3K6 86 aa16.61■□□□□ 0.25
VMP1-210ENST00000589823 SNRKQ9NRH2 765 aa16.61■□□□□ 0.25
VMP1-210ENST00000589823 JAG2Q9Y219 1238 aa16.61■□□□□ 0.25
VMP1-210ENST00000589823 PDS5AQ29RF7 1337 aaKnown RBP16.61■□□□□ 0.25
VMP1-210ENST00000589823 CHD4Q14839 1912 aa16.6■□□□□ 0.25
VMP1-210ENST00000589823 PSMD14O00487 310 aa16.6■□□□□ 0.25
VMP1-210ENST00000589823 PLEKHM2Q8IWE5 1019 aa16.6■□□□□ 0.25
VMP1-210ENST00000589823 GJA3Q9Y6H8 435 aa16.6■□□□□ 0.25
VMP1-210ENST00000589823 AOX1Q06278 1338 aa16.6■□□□□ 0.25
VMP1-210ENST00000589823 ZNF541Q9H0D2 1346 aa16.6■□□□□ 0.25
VMP1-210ENST00000589823 VIL1P09327 827 aaKnown RBP16.59■□□□□ 0.25
VMP1-210ENST00000589823 ZAP70P43403 619 aa16.59■□□□□ 0.25
VMP1-210ENST00000589823 DACT2Q5SW24 774 aa16.59■□□□□ 0.25
VMP1-210ENST00000589823 RSBN1LQ6PCB5 846 aaPredicted RBP16.59■□□□□ 0.25
VMP1-210ENST00000589823 PI16Q6UXB8 463 aa16.59■□□□□ 0.25
VMP1-210ENST00000589823 GPC2Q8N158 579 aa16.59■□□□□ 0.25
VMP1-210ENST00000589823 ZGPATQ8N5A5 531 aaKnown RBP16.59■□□□□ 0.25
VMP1-210ENST00000589823 DNAJC2Q99543 621 aaKnown RBP16.59■□□□□ 0.25
VMP1-210ENST00000589823 OSBPL3Q9H4L5 887 aa16.59■□□□□ 0.25
VMP1-210ENST00000589823 MYO3BQ8WXR4 1341 aa16.59■□□□□ 0.25
VMP1-210ENST00000589823 COL1A1P02452 1464 aaPredicted RBP16.59■□□□□ 0.25
VMP1-210ENST00000589823 FKBP1AP62942 108 aaKnown RBP16.58■□□□□ 0.24
VMP1-210ENST00000589823 MFSD14BQ5SR56 506 aa16.58■□□□□ 0.24
VMP1-210ENST00000589823 PI4K2BQ8TCG2 481 aa16.58■□□□□ 0.24
VMP1-210ENST00000589823 HAUS7Q99871 368 aa16.58■□□□□ 0.24
VMP1-210ENST00000589823 MYH13Q9UKX3 1938 aa16.58■□□□□ 0.24
VMP1-210ENST00000589823 SCN9AQ15858 1988 aa16.57■□□□□ 0.24
VMP1-210ENST00000589823 SALL1Q9NSC2 1324 aa16.57■□□□□ 0.24
VMP1-210ENST00000589823 RPS12P25398 132 aaKnown RBP16.57■□□□□ 0.24
VMP1-210ENST00000589823 TTF1Q15361 905 aaPredicted RBP16.57■□□□□ 0.24
VMP1-210ENST00000589823 SPTY2D1Q68D10 685 aaPredicted RBP16.57■□□□□ 0.24
VMP1-210ENST00000589823 AGBL3Q8NEM8 1001 aa16.57■□□□□ 0.24
VMP1-210ENST00000589823 ABCF2Q9UG63 623 aa16.57■□□□□ 0.24
VMP1-210ENST00000589823 GLTPD2A6NH11 291 aa16.56■□□□□ 0.24
VMP1-210ENST00000589823 GOLIM4O00461 696 aa16.56■□□□□ 0.24
VMP1-210ENST00000589823 DDNO94850 711 aaPredicted RBP16.56■□□□□ 0.24
VMP1-210ENST00000589823 CYP2E1P05181 493 aaPredicted RBP16.56■□□□□ 0.24
VMP1-210ENST00000589823 RGS3P49796 1198 aa16.56■□□□□ 0.24
VMP1-210ENST00000589823 MXD3Q9BW11 206 aa16.56■□□□□ 0.24
VMP1-210ENST00000589823 PAG1Q9NWQ8 432 aa16.56■□□□□ 0.24
VMP1-210ENST00000589823 SUGT1Q9Y2Z0 365 aa16.56■□□□□ 0.24
VMP1-210ENST00000589823 ZBTB12Q9Y330 459 aaPredicted RBP16.56■□□□□ 0.24
VMP1-210ENST00000589823 NDUFB9Q9Y6M9 179 aa16.56■□□□□ 0.24
VMP1-210ENST00000589823 PSME4Q14997 1843 aa16.56■□□□□ 0.24
VMP1-210ENST00000589823 LDHBP07195 334 aaKnown RBP16.55■□□□□ 0.24
VMP1-210ENST00000589823 GMPSP49915 693 aaPredicted RBP16.55■□□□□ 0.24
VMP1-210ENST00000589823 ERICH6Q7L0X2 663 aa16.55■□□□□ 0.24
VMP1-210ENST00000589823 CERS5Q8N5B7 392 aa16.55■□□□□ 0.24
VMP1-210ENST00000589823 LRP2BPQ9P2M1 347 aa16.55■□□□□ 0.24
VMP1-210ENST00000589823 MAST3O60307 1309 aa16.54■□□□□ 0.24
VMP1-210ENST00000589823 MAP4K4O95819 1239 aaPredicted RBP16.54■□□□□ 0.24
VMP1-210ENST00000589823 TBC1D9Q6ZT07 1266 aa16.54■□□□□ 0.24
VMP1-210ENST00000589823 SKAP1Q86WV1 359 aa16.54■□□□□ 0.24
VMP1-210ENST00000589823 KIAA0825Q8IV33 1275 aa16.54■□□□□ 0.24
VMP1-210ENST00000589823 DPF2Q92785 391 aa16.54■□□□□ 0.24
VMP1-210ENST00000589823 EDC3Q96F86 508 aaKnown RBP16.54■□□□□ 0.24
VMP1-210ENST00000589823 ANTXR1Q9H6X2 564 aa16.54■□□□□ 0.24
VMP1-210ENST00000589823 RAI14Q9P0K7 980 aa16.54■□□□□ 0.24
VMP1-210ENST00000589823 HDAC9Q9UKV0 1011 aa16.54■□□□□ 0.24
VMP1-210ENST00000589823 AKAP11Q9UKA4 1901 aa16.54■□□□□ 0.24
VMP1-210ENST00000589823 TRIM6-TRIM34B2RNG4 842 aa16.53■□□□□ 0.24
VMP1-210ENST00000589823 F8W031 263 aaPredicted RBP16.53■□□□□ 0.24
VMP1-210ENST00000589823 IGSF3O75054 1194 aa16.53■□□□□ 0.24
VMP1-210ENST00000589823 IDH1O75874 414 aaKnown RBP16.53■□□□□ 0.24
VMP1-210ENST00000589823 LMOD1P29536 600 aaPredicted RBP16.53■□□□□ 0.24
VMP1-210ENST00000589823 PRDX5P30044 214 aa16.53■□□□□ 0.24
VMP1-210ENST00000589823 DZIP1Q86YF9 867 aaKnown RBP16.53■□□□□ 0.24
VMP1-210ENST00000589823 OGFOD1Q8N543 542 aa16.53■□□□□ 0.24
VMP1-210ENST00000589823 GMLQ99445 158 aa16.53■□□□□ 0.24
VMP1-210ENST00000589823 PIH1D3Q9NQM4 214 aaKnown RBP16.53■□□□□ 0.24
VMP1-210ENST00000589823 TTF2Q9UNY4 1162 aaKnown RBP16.53■□□□□ 0.24
VMP1-210ENST00000589823 H7C1D1 291 aa16.52■□□□□ 0.24
VMP1-210ENST00000589823 USP17L8P0C7I0 530 aa16.52■□□□□ 0.24
VMP1-210ENST00000589823 MMP14P50281 582 aa16.52■□□□□ 0.24
VMP1-210ENST00000589823 MAP3K12Q12852 859 aa16.52■□□□□ 0.24
VMP1-210ENST00000589823 TTC22Q5TAA0 569 aa16.52■□□□□ 0.24
VMP1-210ENST00000589823 CNTROBQ8N137 903 aa16.52■□□□□ 0.24
VMP1-210ENST00000589823 RILPL2Q969X0 211 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms