RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 LOC102724428A0A0B4J2F2 783 aa16.9■□□□□ 0.3
RETREG3-208ENST00000589797 SIK1P57059 783 aa16.9■□□□□ 0.3
RETREG3-208ENST00000589797 ZBTB38Q8NAP3 1195 aaPredicted RBP16.9■□□□□ 0.3
RETREG3-208ENST00000589797 ANO10Q9NW15 660 aa16.9■□□□□ 0.3
RETREG3-208ENST00000589797 A0A087WWV3 80 aa16.9■□□□□ 0.3
RETREG3-208ENST00000589797 CTSWP56202 376 aa16.9■□□□□ 0.3
RETREG3-208ENST00000589797 PICALMQ13492 652 aa16.9■□□□□ 0.3
RETREG3-208ENST00000589797 RTN1Q16799 776 aa16.9■□□□□ 0.3
RETREG3-208ENST00000589797 SOGA3Q5TF21 947 aa16.9■□□□□ 0.3
RETREG3-208ENST00000589797 HAUS7Q99871 368 aa16.9■□□□□ 0.3
RETREG3-208ENST00000589797 ZSWIM6Q9HCJ5 1215 aa16.9■□□□□ 0.3
RETREG3-208ENST00000589797 MAGEB6P1A0A0J9YX57 407 aa16.89■□□□□ 0.3
RETREG3-208ENST00000589797 TYRO3Q06418 890 aa16.89■□□□□ 0.3
RETREG3-208ENST00000589797 PUM3Q15397 648 aaKnown RBP16.89■□□□□ 0.3
RETREG3-208ENST00000589797 CCDC102BQ68D86 513 aa16.89■□□□□ 0.3
RETREG3-208ENST00000589797 SMARCC1Q92922 1105 aaPredicted RBP16.89■□□□□ 0.3
RETREG3-208ENST00000589797 ZC3H13Q5T200 1668 aaKnown RBP16.89■□□□□ 0.29
RETREG3-208ENST00000589797 AFMP43652 599 aa16.89■□□□□ 0.29
RETREG3-208ENST00000589797 CCDC186Q7Z3E2 898 aa16.89■□□□□ 0.29
RETREG3-208ENST00000589797 SDR42E1Q8WUS8 393 aa16.89■□□□□ 0.29
RETREG3-208ENST00000589797 PREX1Q8TCU6 1659 aa16.89■□□□□ 0.29
RETREG3-208ENST00000589797 GIGYF2Q6Y7W6 1299 aaKnown RBP16.89■□□□□ 0.29
RETREG3-208ENST00000589797 NOL7Q9UMY1 257 aaKnown RBP16.89■□□□□ 0.29
RETREG3-208ENST00000589797 MTMR6Q9Y217 621 aa16.89■□□□□ 0.29
RETREG3-208ENST00000589797 IFIT1BQ5T764 474 aaKnown RBP16.89■□□□□ 0.29
RETREG3-208ENST00000589797 WASF1Q92558 559 aa16.89■□□□□ 0.29
RETREG3-208ENST00000589797 TXLNAP40222 546 aa16.88■□□□□ 0.29
RETREG3-208ENST00000589797 CCDC47Q96A33 483 aaKnown RBP16.88■□□□□ 0.29
RETREG3-208ENST00000589797 FTOQ9C0B1 505 aaKnown RBP eCLIP16.88■□□□□ 0.295e-9■■■■□ 21.6
RETREG3-208ENST00000589797 MAP2P11137 1827 aaKnown RBP16.88■□□□□ 0.29
RETREG3-208ENST00000589797 LIG1P18858 919 aa16.88■□□□□ 0.29
RETREG3-208ENST00000589797 TMEM131LA2VDJ0 1609 aa16.88■□□□□ 0.29
RETREG3-208ENST00000589797 LMOD1P29536 600 aaPredicted RBP16.88■□□□□ 0.29
RETREG3-208ENST00000589797 CRKLP46109 303 aaKnown RBP16.88■□□□□ 0.29
RETREG3-208ENST00000589797 CDK5RAP3Q96JB5 506 aa16.88■□□□□ 0.29
RETREG3-208ENST00000589797 ANKARQ7Z5J8 1434 aa16.88■□□□□ 0.29
RETREG3-208ENST00000589797 CDC42BPGQ6DT37 1551 aa16.87■□□□□ 0.29
RETREG3-208ENST00000589797 SYKP43405 635 aa16.87■□□□□ 0.29
RETREG3-208ENST00000589797 ESR2Q92731 530 aa16.87■□□□□ 0.29
RETREG3-208ENST00000589797 OSBP2Q969R2 916 aa16.87■□□□□ 0.29
RETREG3-208ENST00000589797 AATFQ9NY61 560 aaKnown RBP eCLIP16.87■□□□□ 0.29
RETREG3-208ENST00000589797 SPTLC2O15270 562 aa16.87■□□□□ 0.29
RETREG3-208ENST00000589797 PDIA4P13667 645 aaKnown RBP16.87■□□□□ 0.29
RETREG3-208ENST00000589797 SPATA5Q8NB90 893 aa16.87■□□□□ 0.29
RETREG3-208ENST00000589797 HEG1Q9ULI3 1381 aa16.87■□□□□ 0.29
RETREG3-208ENST00000589797 DEPDC5O75140 1603 aa16.87■□□□□ 0.29
RETREG3-208ENST00000589797 LPIN2Q92539 896 aa16.87■□□□□ 0.29
RETREG3-208ENST00000589797 MAP3K15Q6ZN16 1313 aa16.86■□□□□ 0.29
RETREG3-208ENST00000589797 GJB4Q9NTQ9 266 aa16.86■□□□□ 0.29
RETREG3-208ENST00000589797 CRACR2BQ8N4Y2 399 aaPredicted RBP16.86■□□□□ 0.29
RETREG3-208ENST00000589797 LEO1Q8WVC0 666 aaPredicted RBP16.86■□□□□ 0.29
RETREG3-208ENST00000589797 SAP30BPQ9UHR5 308 aaKnown RBP16.86■□□□□ 0.29
RETREG3-208ENST00000589797 CTDP1Q9Y5B0 961 aaPredicted RBP16.86■□□□□ 0.29
RETREG3-208ENST00000589797 PCCAP05165 728 aaPredicted RBP16.86■□□□□ 0.29
RETREG3-208ENST00000589797 TTC6Q86TZ1 520 aa16.86■□□□□ 0.29
RETREG3-208ENST00000589797 AOPEPQ8N6M6 819 aa16.86■□□□□ 0.29
RETREG3-208ENST00000589797 PUS7LQ9H0K6 701 aaKnown RBP16.86■□□□□ 0.29
RETREG3-208ENST00000589797 INCENPQ9NQS7 918 aa16.86■□□□□ 0.29
RETREG3-208ENST00000589797 KCNQ2O43526 872 aa16.85■□□□□ 0.29
RETREG3-208ENST00000589797 IPO7O95373 1038 aaKnown RBP16.85■□□□□ 0.29
RETREG3-208ENST00000589797 MRPS27Q92552 414 aaKnown RBP16.85■□□□□ 0.29
RETREG3-208ENST00000589797 DIP2BQ9P265 1576 aa16.85■□□□□ 0.29
RETREG3-208ENST00000589797 NLRP10Q86W26 655 aa16.85■□□□□ 0.29
RETREG3-208ENST00000589797 MNS1Q8NEH6 495 aa16.85■□□□□ 0.29
RETREG3-208ENST00000589797 CRNKL1Q9BZJ0 848 aaKnown RBP16.85■□□□□ 0.29
RETREG3-208ENST00000589797 KCNJ14Q9UNX9 436 aa16.85■□□□□ 0.29
RETREG3-208ENST00000589797 PPLO60437 1756 aa16.85■□□□□ 0.29
RETREG3-208ENST00000589797 CEP170BQ9Y4F5 1589 aaPredicted RBP16.85■□□□□ 0.29
RETREG3-208ENST00000589797 NAP1L1P55209 391 aaKnown RBP16.85■□□□□ 0.29
RETREG3-208ENST00000589797 FAM200AQ8TCP9 573 aa16.85■□□□□ 0.29
RETREG3-208ENST00000589797 ATG3Q9NT62 314 aa16.85■□□□□ 0.29
RETREG3-208ENST00000589797 TAF6LQ9Y6J9 622 aa16.85■□□□□ 0.29
RETREG3-208ENST00000589797 PDE8BO95263 885 aa16.84■□□□□ 0.29
RETREG3-208ENST00000589797 TMC6Q7Z403 805 aa16.84■□□□□ 0.29
RETREG3-208ENST00000589797 PLIN2Q99541 437 aa16.84■□□□□ 0.29
RETREG3-208ENST00000589797 TM6SF1Q9BZW5 370 aa16.84■□□□□ 0.29
RETREG3-208ENST00000589797 KAT14Q9H8E8 782 aa16.84■□□□□ 0.29
RETREG3-208ENST00000589797 TPM2P07951 284 aa16.84■□□□□ 0.29
RETREG3-208ENST00000589797 PDE6AP16499 860 aa16.84■□□□□ 0.29
RETREG3-208ENST00000589797 PDE4BQ07343 736 aa16.84■□□□□ 0.29
RETREG3-208ENST00000589797 CCDC96Q2M329 555 aa16.84■□□□□ 0.29
RETREG3-208ENST00000589797 KRT23Q9C075 422 aa16.84■□□□□ 0.29
RETREG3-208ENST00000589797 ANGEL1Q9UNK9 670 aaKnown RBP16.84■□□□□ 0.29
RETREG3-208ENST00000589797 KIAA1210Q9ULL0 1709 aa16.84■□□□□ 0.29
RETREG3-208ENST00000589797 NECTIN1Q15223 517 aa16.84■□□□□ 0.29
RETREG3-208ENST00000589797 TRAPPC3LQ5T215 181 aa16.84■□□□□ 0.29
RETREG3-208ENST00000589797 USPL1Q5W0Q7 1092 aa16.84■□□□□ 0.29
RETREG3-208ENST00000589797 UIMC1Q96RL1 719 aa16.84■□□□□ 0.29
RETREG3-208ENST00000589797 CCDC194A0A1B0GVG4 234 aa16.83■□□□□ 0.29
RETREG3-208ENST00000589797 SCRN1Q12765 414 aa16.83■□□□□ 0.29
RETREG3-208ENST00000589797 ZBTB9Q96C00 473 aa16.83■□□□□ 0.29
RETREG3-208ENST00000589797 USP21Q9UK80 565 aa16.83■□□□□ 0.29
RETREG3-208ENST00000589797 M0R2C6 588 aa16.83■□□□□ 0.28
RETREG3-208ENST00000589797 PRKAB2O43741 272 aa16.83■□□□□ 0.28
RETREG3-208ENST00000589797 EIF6P56537 245 aaKnown RBP16.83■□□□□ 0.28
RETREG3-208ENST00000589797 MAST3O60307 1309 aa16.83■□□□□ 0.28
RETREG3-208ENST00000589797 ATP10DQ9P241 1426 aa16.83■□□□□ 0.28
RETREG3-208ENST00000589797 H7C1W4 665 aa16.83■□□□□ 0.28
RETREG3-208ENST00000589797 KRT18P05783 430 aaKnown RBP16.83■□□□□ 0.28
RETREG3-208ENST00000589797 GTF3C6Q969F1 213 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms