RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 ZNF804BA4D1E1 1349 aa8.05□□□□□ -1.12
VPS25-204ENST00000589577 XDHP47989 1333 aa8.05□□□□□ -1.12
VPS25-204ENST00000589577 MYO3BQ8WXR4 1341 aa8.05□□□□□ -1.12
VPS25-204ENST00000589577 A0A1B0GUL6 1792 aa8.05□□□□□ -1.12
VPS25-204ENST00000589577 CCL15-CCL14A0A0B4J2E2 113 aa8.05□□□□□ -1.12
VPS25-204ENST00000589577 TLR2O60603 784 aa8.05□□□□□ -1.12
VPS25-204ENST00000589577 ECM2O94769 699 aaPredicted RBP8.05□□□□□ -1.12
VPS25-204ENST00000589577 GNRH1P01148 92 aa8.05□□□□□ -1.12
VPS25-204ENST00000589577 GRK4P32298 578 aa8.05□□□□□ -1.12
VPS25-204ENST00000589577 PRMT2P55345 433 aa8.05□□□□□ -1.12
VPS25-204ENST00000589577 CCL15Q16663 113 aa8.05□□□□□ -1.12
VPS25-204ENST00000589577 STRIP1Q5VSL9 837 aa8.05□□□□□ -1.12
VPS25-204ENST00000589577 TXNRD3Q86VQ6 643 aa8.05□□□□□ -1.12
VPS25-204ENST00000589577 KIAA0825Q8IV33 1275 aa8.05□□□□□ -1.12
VPS25-204ENST00000589577 ANKRD13AQ8IZ07 590 aa8.05□□□□□ -1.12
VPS25-204ENST00000589577 TRIM47Q96LD4 638 aa8.05□□□□□ -1.12
VPS25-204ENST00000589577 ISCA1Q9BUE6 129 aa8.05□□□□□ -1.12
VPS25-204ENST00000589577 RNF208Q9H0X6 261 aa8.05□□□□□ -1.12
VPS25-204ENST00000589577 UNC93B1Q9H1C4 597 aa8.05□□□□□ -1.12
VPS25-204ENST00000589577 SRRDQ9UH36 339 aa8.05□□□□□ -1.12
VPS25-204ENST00000589577 RIPOR2Q9Y4F9 1068 aa8.05□□□□□ -1.12
VPS25-204ENST00000589577 PPP2R3BQ9Y5P8 575 aa8.05□□□□□ -1.12
VPS25-204ENST00000589577 DDX60LQ5H9U9 1706 aaKnown RBP8.05□□□□□ -1.12
VPS25-204ENST00000589577 MYH3P11055 1940 aa8.05□□□□□ -1.12
VPS25-204ENST00000589577 BDP1A6H8Y1 2624 aa8.04□□□□□ -1.12
VPS25-204ENST00000589577 EIF2S2P20042 333 aaKnown RBP8.04□□□□□ -1.12
VPS25-204ENST00000589577 OSBPP22059 807 aa8.04□□□□□ -1.12
VPS25-204ENST00000589577 IREB2P48200 963 aaKnown RBP8.04□□□□□ -1.12
VPS25-204ENST00000589577 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.04□□□□□ -1.12
VPS25-204ENST00000589577 CDAN1Q8IWY9 1227 aa8.04□□□□□ -1.12
VPS25-204ENST00000589577 TDHQ8IZJ6 230 aa8.04□□□□□ -1.12
VPS25-204ENST00000589577 ZMYND8Q9ULU4 1186 aaPredicted RBP8.04□□□□□ -1.12
VPS25-204ENST00000589577 ADGRA2Q96PE1 1338 aa8.03□□□□□ -1.12
VPS25-204ENST00000589577 ATP5J2-PTCD1G3V325 749 aa8.03□□□□□ -1.12
VPS25-204ENST00000589577 POTEB2H3BUK9 544 aa8.03□□□□□ -1.12
VPS25-204ENST00000589577 IRS4O14654 1257 aaPredicted RBP8.03□□□□□ -1.12
VPS25-204ENST00000589577 SGPL1O95470 568 aa8.03□□□□□ -1.12
VPS25-204ENST00000589577 U2AF1L5P0DN76 240 aaPredicted RBP8.03□□□□□ -1.12
VPS25-204ENST00000589577 ATP2B4P23634 1241 aa8.03□□□□□ -1.12
VPS25-204ENST00000589577 HOXD11P31277 338 aaPredicted RBP8.03□□□□□ -1.12
VPS25-204ENST00000589577 MAGEA10P43363 369 aaPredicted RBP8.03□□□□□ -1.12
VPS25-204ENST00000589577 EIF4G2P78344 907 aaKnown RBP eCLIP8.03□□□□□ -1.12
VPS25-204ENST00000589577 U2AF1Q01081 240 aaKnown RBP eCLIP8.03□□□□□ -1.12
VPS25-204ENST00000589577 VGLL4Q14135 290 aa8.03□□□□□ -1.12
VPS25-204ENST00000589577 CERS5Q8N5B7 392 aa8.03□□□□□ -1.12
VPS25-204ENST00000589577 DIS3LQ8TF46 1054 aaKnown RBP8.03□□□□□ -1.12
VPS25-204ENST00000589577 FBXW7Q969H0 707 aa8.03□□□□□ -1.12
VPS25-204ENST00000589577 CLRN2A0PK11 232 aa8.02□□□□□ -1.13
VPS25-204ENST00000589577 BTBD19C9JJ37 291 aa8.02□□□□□ -1.13
VPS25-204ENST00000589577 SYN1P17600 705 aa8.02□□□□□ -1.13
VPS25-204ENST00000589577 KLRK1P26718 216 aa8.02□□□□□ -1.13
VPS25-204ENST00000589577 PSMC4P43686 418 aa8.02□□□□□ -1.13
VPS25-204ENST00000589577 MMP14P50281 582 aa8.02□□□□□ -1.13
VPS25-204ENST00000589577 GTF2A2P52657 109 aa8.02□□□□□ -1.13
VPS25-204ENST00000589577 KIF22Q14807 665 aa8.02□□□□□ -1.13
VPS25-204ENST00000589577 SUPT20HL1Q3ZLR7 823 aa8.02□□□□□ -1.13
VPS25-204ENST00000589577 C17orf99Q6UX52 265 aa8.02□□□□□ -1.13
VPS25-204ENST00000589577 C7orf61Q8IZ16 206 aa8.02□□□□□ -1.13
VPS25-204ENST00000589577 MTMR14Q8NCE2 650 aa8.02□□□□□ -1.13
VPS25-204ENST00000589577 PAWRQ96IZ0 340 aaKnown RBP8.02□□□□□ -1.13
VPS25-204ENST00000589577 FAM161BQ96MY7 647 aa8.02□□□□□ -1.13
VPS25-204ENST00000589577 MYPNQ86TC9 1320 aa8.02□□□□□ -1.13
VPS25-204ENST00000589577 IRS2Q9Y4H2 1338 aa8.02□□□□□ -1.13
VPS25-204ENST00000589577 DOCK3Q8IZD9 2030 aa8.02□□□□□ -1.13
VPS25-204ENST00000589577 PRKCZQ05513 592 aa8.01□□□□□ -1.13
VPS25-204ENST00000589577 RASA3Q14644 834 aa8.01□□□□□ -1.13
VPS25-204ENST00000589577 DLGAP5Q15398 846 aa8.01□□□□□ -1.13
VPS25-204ENST00000589577 FAM109BQ6ICB4 259 aaPredicted RBP8.01□□□□□ -1.13
VPS25-204ENST00000589577 PLBD2Q8NHP8 589 aa8.01□□□□□ -1.13
VPS25-204ENST00000589577 RAET1EQ8TD07 263 aa8.01□□□□□ -1.13
VPS25-204ENST00000589577 PRMT6Q96LA8 375 aaPredicted RBP8.01□□□□□ -1.13
VPS25-204ENST00000589577 TEPSINQ96N21 525 aa8.01□□□□□ -1.13
VPS25-204ENST00000589577 CCDC85AQ96PX6 553 aaPredicted RBP8.01□□□□□ -1.13
VPS25-204ENST00000589577 COA1Q9GZY4 146 aa8.01□□□□□ -1.13
VPS25-204ENST00000589577 CRISPLD2Q9H0B8 497 aa8.01□□□□□ -1.13
VPS25-204ENST00000589577 ZCCHC17Q9NP64 241 aaKnown RBP8.01□□□□□ -1.13
VPS25-204ENST00000589577 CPA4Q9UI42 421 aa8.01□□□□□ -1.13
VPS25-204ENST00000589577 NCOR1O75376 2440 aa8.01□□□□□ -1.13
VPS25-204ENST00000589577 REV3LO60673 3130 aa8□□□□□ -1.13
VPS25-204ENST00000589577 SPDYE2BA6NHP3 402 aa8□□□□□ -1.13
VPS25-204ENST00000589577 SPDYE5A6NIY4 337 aa8□□□□□ -1.13
VPS25-204ENST00000589577 SPDYE6P0CI01 402 aa8□□□□□ -1.13
VPS25-204ENST00000589577 CNGB1Q14028 1251 aaPredicted RBP8□□□□□ -1.13
VPS25-204ENST00000589577 TTLL5Q6EMB2 1281 aa8□□□□□ -1.13
VPS25-204ENST00000589577 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8□□□□□ -1.13
VPS25-204ENST00000589577 DEFB118Q96PH6 123 aa8□□□□□ -1.13
VPS25-204ENST00000589577 PAK6Q9NQU5 681 aaPredicted RBP8□□□□□ -1.13
VPS25-204ENST00000589577 GABRQQ9UN88 632 aa8□□□□□ -1.13
VPS25-204ENST00000589577 MINPP1Q9UNW1 487 aa8□□□□□ -1.13
VPS25-204ENST00000589577 LTBP2Q14767 1821 aa7.99□□□□□ -1.13
VPS25-204ENST00000589577 XIRP2A4UGR9 3374 aa7.99□□□□□ -1.13
VPS25-204ENST00000589577 ELNP15502 786 aa7.99□□□□□ -1.13
VPS25-204ENST00000589577 CCT4P50991 539 aaKnown RBP7.99□□□□□ -1.13
VPS25-204ENST00000589577 UBXN2AP68543 259 aa7.99□□□□□ -1.13
VPS25-204ENST00000589577 GTF2IP78347 998 aa7.99□□□□□ -1.13
VPS25-204ENST00000589577 TRIM28Q13263 835 aaKnown RBP7.99□□□□□ -1.13
VPS25-204ENST00000589577 KRT24Q2M2I5 525 aa7.99□□□□□ -1.13
VPS25-204ENST00000589577 ANKRD18AQ8IVF6 992 aa7.99□□□□□ -1.13
VPS25-204ENST00000589577 ZBTB38Q8NAP3 1195 aaPredicted RBP7.99□□□□□ -1.13
VPS25-204ENST00000589577 SLAIN1Q8ND83 568 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms