RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 GTF2IP78347 998 aa27.56■■■□□ 2
R3HDM4-205ENST00000589445 CCDC102BQ68D86 513 aa27.56■■■□□ 2
R3HDM4-205ENST00000589445 USP17L1Q7RTZ2 530 aa27.56■■■□□ 2
R3HDM4-205ENST00000589445 DBNLQ9UJU6 430 aaKnown RBP27.56■■■□□ 2
R3HDM4-205ENST00000589445 TTC39AQ5SRH9 613 aa27.55■■■□□ 2
R3HDM4-205ENST00000589445 TDRD7Q8NHU6 1098 aaKnown RBP27.54■■■□□ 2
R3HDM4-205ENST00000589445 CAPN15O75808 1086 aa27.53■■■□□ 2
R3HDM4-205ENST00000589445 GMPSP49915 693 aaPredicted RBP27.53■■■□□ 2
R3HDM4-205ENST00000589445 MXD3Q9BW11 206 aa27.53■■■□□ 2
R3HDM4-205ENST00000589445 ZBTB12Q9Y330 459 aaPredicted RBP27.53■■■□□ 2
R3HDM4-205ENST00000589445 CCDC158Q5M9N0 1113 aa27.52■■■□□ 2
R3HDM4-205ENST00000589445 ANKRD45Q5TZF3 282 aa27.52■■■□□ 2
R3HDM4-205ENST00000589445 STRIP1Q5VSL9 837 aa27.52■■■□□ 2
R3HDM4-205ENST00000589445 TTLL5Q6EMB2 1281 aa27.52■■■□□ 2
R3HDM4-205ENST00000589445 B4GALNT3Q6L9W6 998 aa27.52■■■□□ 2
R3HDM4-205ENST00000589445 ADAMTSL1Q8N6G6 1762 aa27.52■■■□□ 2
R3HDM4-205ENST00000589445 AKAP11Q9UKA4 1901 aa27.51■■■□□ 2
R3HDM4-205ENST00000589445 DACT2Q5SW24 774 aa27.51■■□□□ 1.99
R3HDM4-205ENST00000589445 COL13A1Q5TAT6 717 aaPredicted RBP27.51■■□□□ 1.99
R3HDM4-205ENST00000589445 RSBN1LQ6PCB5 846 aaPredicted RBP27.51■■□□□ 1.99
R3HDM4-205ENST00000589445 MAST2Q6P0Q8 1798 aa27.5■■□□□ 1.99
R3HDM4-205ENST00000589445 LMOD1P29536 600 aaPredicted RBP27.5■■□□□ 1.99
R3HDM4-205ENST00000589445 RASGRF1Q13972 1273 aa27.5■■□□□ 1.99
R3HDM4-205ENST00000589445 UQCRFS1P1P0C7P4 283 aa27.49■■□□□ 1.99
R3HDM4-205ENST00000589445 SMC5Q8IY18 1101 aa27.49■■□□□ 1.99
R3HDM4-205ENST00000589445 FAM205AQ6ZU69 1335 aa27.48■■□□□ 1.99
R3HDM4-205ENST00000589445 MYO3BQ8WXR4 1341 aa27.48■■□□□ 1.99
R3HDM4-205ENST00000589445 SEMA3EO15041 775 aa27.48■■□□□ 1.99
R3HDM4-205ENST00000589445 VIL1P09327 827 aaKnown RBP27.48■■□□□ 1.99
R3HDM4-205ENST00000589445 ARID4AP29374 1257 aaPredicted RBP27.48■■□□□ 1.99
R3HDM4-205ENST00000589445 NMRK2Q9NPI5 230 aa27.48■■□□□ 1.99
R3HDM4-205ENST00000589445 DENND2AQ9ULE3 1009 aa27.48■■□□□ 1.99
R3HDM4-205ENST00000589445 SCNN1DP51172 638 aa27.47■■□□□ 1.99
R3HDM4-205ENST00000589445 MFSD14BQ5SR56 506 aa27.47■■□□□ 1.99
R3HDM4-205ENST00000589445 L3MBTL3Q96JM7 780 aaPredicted RBP27.47■■□□□ 1.99
R3HDM4-205ENST00000589445 RPS12P25398 132 aaKnown RBP27.46■■□□□ 1.99
R3HDM4-205ENST00000589445 SCARF1Q14162 830 aa27.46■■□□□ 1.99
R3HDM4-205ENST00000589445 PI16Q6UXB8 463 aa27.46■■□□□ 1.99
R3HDM4-205ENST00000589445 KLRG1Q96E93 195 aa27.46■■□□□ 1.99
R3HDM4-205ENST00000589445 GPATCH3Q96I76 525 aa27.46■■□□□ 1.99
R3HDM4-205ENST00000589445 CCDC136Q96JN2 1154 aa27.46■■□□□ 1.99
R3HDM4-205ENST00000589445 LNPKQ9C0E8 428 aa27.46■■□□□ 1.99
R3HDM4-205ENST00000589445 MYO5AQ9Y4I1 1855 aaKnown RBP27.46■■□□□ 1.99
R3HDM4-205ENST00000589445 F8W031 263 aaPredicted RBP27.45■■□□□ 1.98
R3HDM4-205ENST00000589445 MCAMP43121 646 aa27.45■■□□□ 1.98
R3HDM4-205ENST00000589445 KIAA0825Q8IV33 1275 aa27.45■■□□□ 1.98
R3HDM4-205ENST00000589445 MICALL2Q8IY33 904 aa27.45■■□□□ 1.98
R3HDM4-205ENST00000589445 CERS5Q8N5B7 392 aa27.45■■□□□ 1.98
R3HDM4-205ENST00000589445 RRAGCQ9HB90 399 aa27.45■■□□□ 1.98
R3HDM4-205ENST00000589445 GPRC5DQ9NZD1 345 aa27.45■■□□□ 1.98
R3HDM4-205ENST00000589445 HACL1Q9UJ83 578 aa27.45■■□□□ 1.98
R3HDM4-205ENST00000589445 DOCK2Q92608 1830 aa27.44■■□□□ 1.98
R3HDM4-205ENST00000589445 SHTN1A0MZ66 631 aa27.44■■□□□ 1.98
R3HDM4-205ENST00000589445 IQCA1LA6NCM1 817 aa27.44■■□□□ 1.98
R3HDM4-205ENST00000589445 TNS4Q8IZW8 715 aa27.44■■□□□ 1.98
R3HDM4-205ENST00000589445 SPATA5Q8NB90 893 aa27.44■■□□□ 1.98
R3HDM4-205ENST00000589445 AGBL3Q8NEM8 1001 aa27.44■■□□□ 1.98
R3HDM4-205ENST00000589445 TBC1D22AQ8WUA7 517 aa27.44■■□□□ 1.98
R3HDM4-205ENST00000589445 SNRKQ9NRH2 765 aa27.44■■□□□ 1.98
R3HDM4-205ENST00000589445 HMG20BQ9P0W2 317 aa27.44■■□□□ 1.98
R3HDM4-205ENST00000589445 JMYQ8N9B5 988 aa27.43■■□□□ 1.98
R3HDM4-205ENST00000589445 WDR66Q8TBY9 1149 aa27.43■■□□□ 1.98
R3HDM4-205ENST00000589445 TSHZ3Q63HK5 1081 aa27.42■■□□□ 1.98
R3HDM4-205ENST00000589445 RBM46Q8TBY0 533 aaKnown RBP27.42■■□□□ 1.98
R3HDM4-205ENST00000589445 OTUD7AQ8TE49 926 aaPredicted RBP27.42■■□□□ 1.98
R3HDM4-205ENST00000589445 PDS5AQ29RF7 1337 aaKnown RBP27.41■■□□□ 1.98
R3HDM4-205ENST00000589445 ECM29Q5VYK3 1845 aa27.41■■□□□ 1.98
R3HDM4-205ENST00000589445 EPS15P42566 896 aa27.41■■□□□ 1.98
R3HDM4-205ENST00000589445 FKBP1AP62942 108 aaKnown RBP27.41■■□□□ 1.98
R3HDM4-205ENST00000589445 NUCB1Q02818 461 aa27.41■■□□□ 1.98
R3HDM4-205ENST00000589445 CHD1LQ86WJ1 897 aa27.41■■□□□ 1.98
R3HDM4-205ENST00000589445 C16orf71Q8IYS4 520 aaPredicted RBP27.41■■□□□ 1.98
R3HDM4-205ENST00000589445 ABCF2Q9UG63 623 aa27.41■■□□□ 1.98
R3HDM4-205ENST00000589445 CNOT7Q9UIV1 285 aaKnown RBP27.41■■□□□ 1.98
R3HDM4-205ENST00000589445 H7C1D1 291 aa27.4■■□□□ 1.98
R3HDM4-205ENST00000589445 USP17L8P0C7I0 530 aa27.4■■□□□ 1.98
R3HDM4-205ENST00000589445 VEGFAP15692 232 aaPredicted RBP27.4■■□□□ 1.98
R3HDM4-205ENST00000589445 DPF2Q92785 391 aa27.4■■□□□ 1.98
R3HDM4-205ENST00000589445 GMLQ99445 158 aa27.4■■□□□ 1.98
R3HDM4-205ENST00000589445 DNAJC2Q99543 621 aaKnown RBP27.4■■□□□ 1.98
R3HDM4-205ENST00000589445 NDUFB9Q9Y6M9 179 aa27.4■■□□□ 1.98
R3HDM4-205ENST00000589445 MYH7P12883 1935 aa27.39■■□□□ 1.98
R3HDM4-205ENST00000589445 MYH2Q9UKX2 1941 aa27.39■■□□□ 1.98
R3HDM4-205ENST00000589445 EPHX2P34913 555 aa27.39■■□□□ 1.98
R3HDM4-205ENST00000589445 OGFOD1Q8N543 542 aa27.39■■□□□ 1.98
R3HDM4-205ENST00000589445 ZNF512BQ96KM6 892 aaPredicted RBP27.39■■□□□ 1.98
R3HDM4-205ENST00000589445 ECHDC1Q9NTX5 307 aa27.39■■□□□ 1.98
R3HDM4-205ENST00000589445 HDAC9Q9UKV0 1011 aa27.39■■□□□ 1.98
R3HDM4-205ENST00000589445 TTF2Q9UNY4 1162 aaKnown RBP27.39■■□□□ 1.98
R3HDM4-205ENST00000589445 MX1P20591 662 aa27.38■■□□□ 1.97
R3HDM4-205ENST00000589445 ZAP70P43403 619 aa27.38■■□□□ 1.97
R3HDM4-205ENST00000589445 HTRA3P83110 453 aa27.38■■□□□ 1.97
R3HDM4-205ENST00000589445 GRIK5Q16478 980 aa27.38■■□□□ 1.97
R3HDM4-205ENST00000589445 TBC1D10BQ4KMP7 808 aaPredicted RBP27.38■■□□□ 1.97
R3HDM4-205ENST00000589445 EAPPQ56P03 285 aaPredicted RBP27.38■■□□□ 1.97
R3HDM4-205ENST00000589445 CENPQQ7L2Z9 268 aaPredicted RBP27.38■■□□□ 1.97
R3HDM4-205ENST00000589445 ZGPATQ8N5A5 531 aaKnown RBP27.38■■□□□ 1.97
R3HDM4-205ENST00000589445 TAF1DQ9H5J8 278 aaPredicted RBP27.38■■□□□ 1.97
R3HDM4-205ENST00000589445 SALL1Q9NSC2 1324 aa27.38■■□□□ 1.97
R3HDM4-205ENST00000589445 POTECB2RU33 542 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms