RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 VPS37DQ86XT2 251 aa21.8■■□□□ 1.08
H3F3B-207ENST00000589417 MTMR14Q8NCE2 650 aa21.8■■□□□ 1.08
H3F3B-207ENST00000589417 FBXW7Q969H0 707 aa21.8■■□□□ 1.08
H3F3B-207ENST00000589417 ZBED3Q96IU2 234 aaPredicted RBP21.8■■□□□ 1.08
H3F3B-207ENST00000589417 BCAMP50895 628 aa21.79■■□□□ 1.08
H3F3B-207ENST00000589417 SCARF1Q14162 830 aa21.79■■□□□ 1.08
H3F3B-207ENST00000589417 CHMP4BQ9H444 224 aaKnown RBP21.79■■□□□ 1.08
H3F3B-207ENST00000589417 ZBTB40Q9NUA8 1239 aa21.79■■□□□ 1.08
H3F3B-207ENST00000589417 HDAC9Q9UKV0 1011 aa21.79■■□□□ 1.08
H3F3B-207ENST00000589417 NOP58Q9Y2X3 529 aaKnown RBP21.79■■□□□ 1.08
H3F3B-207ENST00000589417 PITPNM2Q9BZ72 1349 aa21.79■■□□□ 1.08
H3F3B-207ENST00000589417 HTRA3P83110 453 aa21.78■■□□□ 1.08
H3F3B-207ENST00000589417 KIAA0825Q8IV33 1275 aa21.78■■□□□ 1.08
H3F3B-207ENST00000589417 GLIS2Q9BZE0 524 aaPredicted RBP21.78■■□□□ 1.08
H3F3B-207ENST00000589417 AKAP2Q9Y2D5 859 aa21.78■■□□□ 1.08
H3F3B-207ENST00000589417 WNT10BO00744 389 aa21.77■■□□□ 1.08
H3F3B-207ENST00000589417 G3BP1Q13283 466 aaKnown RBP eCLIP21.77■■□□□ 1.082e-8■□□□□ 10.3
H3F3B-207ENST00000589417 CEP85Q6P2H3 762 aa21.77■■□□□ 1.08
H3F3B-207ENST00000589417 TBC1D22AQ8WUA7 517 aa21.77■■□□□ 1.08
H3F3B-207ENST00000589417 DCPSQ96C86 337 aaKnown RBP21.77■■□□□ 1.08
H3F3B-207ENST00000589417 KLRG1Q96E93 195 aa21.77■■□□□ 1.08
H3F3B-207ENST00000589417 C1orf115Q9H7X2 142 aa21.77■■□□□ 1.08
H3F3B-207ENST00000589417 COG6Q9Y2V7 657 aa21.77■■□□□ 1.08
H3F3B-207ENST00000589417 TRAF5O00463 557 aa21.76■■□□□ 1.07
H3F3B-207ENST00000589417 TFCP2Q12800 502 aa21.76■■□□□ 1.07
H3F3B-207ENST00000589417 MFSD14BQ5SR56 506 aa21.76■■□□□ 1.07
H3F3B-207ENST00000589417 CST9Q5W186 159 aa21.76■■□□□ 1.07
H3F3B-207ENST00000589417 SUGT1Q9Y2Z0 365 aa21.76■■□□□ 1.07
H3F3B-207ENST00000589417 SEMA3EO15041 775 aa21.75■■□□□ 1.07
H3F3B-207ENST00000589417 KRT26Q7Z3Y9 468 aa21.75■■□□□ 1.07
H3F3B-207ENST00000589417 MRIQ9BWK5 157 aa21.75■■□□□ 1.07
H3F3B-207ENST00000589417 GPR108Q9NPR9 543 aa21.75■■□□□ 1.07
H3F3B-207ENST00000589417 GGA3Q9NZ52 723 aa21.75■■□□□ 1.07
H3F3B-207ENST00000589417 FMR1Q06787 632 aaKnown RBP eCLIP21.74■■□□□ 1.07
H3F3B-207ENST00000589417 NBPF9Q3BBW0 867 aa21.74■■□□□ 1.07
H3F3B-207ENST00000589417 USP48Q86UV5 1035 aa21.74■■□□□ 1.07
H3F3B-207ENST00000589417 RPAP2Q8IXW5 612 aaPredicted RBP21.74■■□□□ 1.07
H3F3B-207ENST00000589417 ASTN2O75129 1339 aaPredicted RBP21.74■■□□□ 1.07
H3F3B-207ENST00000589417 A0A1B0GUL7 405 aa21.73■■□□□ 1.07
H3F3B-207ENST00000589417 TIMM10P62072 90 aa21.73■■□□□ 1.07
H3F3B-207ENST00000589417 HDLBPQ00341 1268 aaKnown RBP21.73■■□□□ 1.07
H3F3B-207ENST00000589417 C20orf194Q5TEA3 1177 aa21.73■■□□□ 1.07
H3F3B-207ENST00000589417 ANGEL2Q5VTE6 544 aaKnown RBP21.73■■□□□ 1.07
H3F3B-207ENST00000589417 SULF1Q8IWU6 871 aa21.73■■□□□ 1.07
H3F3B-207ENST00000589417 JMYQ8N9B5 988 aa21.73■■□□□ 1.07
H3F3B-207ENST00000589417 GNL3LQ9NVN8 582 aaKnown RBP21.73■■□□□ 1.07
H3F3B-207ENST00000589417 SERPINA10Q9UK55 444 aa21.73■■□□□ 1.07
H3F3B-207ENST00000589417 JAG2Q9Y219 1238 aa21.73■■□□□ 1.07
H3F3B-207ENST00000589417 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.73■■□□□ 1.07
H3F3B-207ENST00000589417 RASSF10A6NK89 507 aa21.72■■□□□ 1.07
H3F3B-207ENST00000589417 FRAT2O75474 233 aaPredicted RBP21.72■■□□□ 1.07
H3F3B-207ENST00000589417 DLGAP5Q15398 846 aa21.72■■□□□ 1.07
H3F3B-207ENST00000589417 WDR66Q8TBY9 1149 aa21.72■■□□□ 1.07
H3F3B-207ENST00000589417 YTHDC1Q96MU7 727 aaKnown RBP21.72■■□□□ 1.07
H3F3B-207ENST00000589417 IQSEC3Q9UPP2 1182 aaPredicted RBP21.72■■□□□ 1.07
H3F3B-207ENST00000589417 SURF6O75683 361 aaKnown RBP21.71■■□□□ 1.07
H3F3B-207ENST00000589417 CCDC102BQ68D86 513 aa21.71■■□□□ 1.07
H3F3B-207ENST00000589417 XAGE2Q96GT9 111 aa21.71■■□□□ 1.07
H3F3B-207ENST00000589417 PDS5AQ29RF7 1337 aaKnown RBP21.71■■□□□ 1.07
H3F3B-207ENST00000589417 CNTNAP1P78357 1384 aa21.71■■□□□ 1.07
H3F3B-207ENST00000589417 SPDYE2BA6NHP3 402 aa21.7■■□□□ 1.06
H3F3B-207ENST00000589417 CELF2O95319 508 aaKnown RBP21.7■■□□□ 1.06
H3F3B-207ENST00000589417 SPDYE6P0CI01 402 aa21.7■■□□□ 1.06
H3F3B-207ENST00000589417 ADORA1P30542 326 aa21.7■■□□□ 1.06
H3F3B-207ENST00000589417 PHKA1P46020 1223 aa21.7■■□□□ 1.06
H3F3B-207ENST00000589417 CFAP100Q494V2 611 aa21.7■■□□□ 1.06
H3F3B-207ENST00000589417 DENND2AQ9ULE3 1009 aa21.7■■□□□ 1.06
H3F3B-207ENST00000589417 TTF2Q9UNY4 1162 aaKnown RBP21.7■■□□□ 1.06
H3F3B-207ENST00000589417 TLL2Q9Y6L7 1015 aa21.7■■□□□ 1.06
H3F3B-207ENST00000589417 SALL1Q9NSC2 1324 aa21.7■■□□□ 1.06
H3F3B-207ENST00000589417 ADM5C9JUS6 153 aa21.69■■□□□ 1.06
H3F3B-207ENST00000589417 CHAF1AQ13111 956 aaPredicted RBP21.69■■□□□ 1.06
H3F3B-207ENST00000589417 HHIPL1Q96JK4 782 aa21.69■■□□□ 1.06
H3F3B-207ENST00000589417 F8W031 263 aaPredicted RBP21.68■■□□□ 1.06
H3F3B-207ENST00000589417 GRIK5Q16478 980 aa21.68■■□□□ 1.06
H3F3B-207ENST00000589417 SAPCD2Q86UD0 394 aa21.68■■□□□ 1.06
H3F3B-207ENST00000589417 SIRT2Q8IXJ6 389 aa21.68■■□□□ 1.06
H3F3B-207ENST00000589417 PRMT6Q96LA8 375 aaPredicted RBP21.68■■□□□ 1.06
H3F3B-207ENST00000589417 DEFB115Q30KQ5 88 aa21.67■■□□□ 1.06
H3F3B-207ENST00000589417 TNNI3KQ59H18 835 aa21.67■■□□□ 1.06
H3F3B-207ENST00000589417 DLK2Q6UY11 383 aa21.67■■□□□ 1.06
H3F3B-207ENST00000589417 APOBEC3FQ8IUX4 373 aaKnown RBP21.67■■□□□ 1.06
H3F3B-207ENST00000589417 FPGT-TNNI3KV9GXZ4 949 aa21.67■■□□□ 1.06
H3F3B-207ENST00000589417 COL1A1P02452 1464 aaPredicted RBP21.66■■□□□ 1.06
H3F3B-207ENST00000589417 MAST3O60307 1309 aa21.66■■□□□ 1.06
H3F3B-207ENST00000589417 HMMRO75330 724 aa21.66■■□□□ 1.06
H3F3B-207ENST00000589417 RRP1P56182 461 aaKnown RBP21.66■■□□□ 1.06
H3F3B-207ENST00000589417 HSP90AB4PQ58FF6 505 aa21.66■■□□□ 1.06
H3F3B-207ENST00000589417 CDCA5Q96FF9 252 aa21.66■■□□□ 1.06
H3F3B-207ENST00000589417 PCDHAC2Q9Y5I4 1007 aa21.66■■□□□ 1.06
H3F3B-207ENST00000589417 MYO1BO43795 1136 aa21.65■■□□□ 1.06
H3F3B-207ENST00000589417 CRKP46108 304 aa21.65■■□□□ 1.06
H3F3B-207ENST00000589417 OS9Q13438 667 aaPredicted RBP21.65■■□□□ 1.06
H3F3B-207ENST00000589417 RASGRF1Q13972 1273 aa21.65■■□□□ 1.06
H3F3B-207ENST00000589417 HHIPL2Q6UWX4 724 aa21.65■■□□□ 1.06
H3F3B-207ENST00000589417 ERC1Q8IUD2 1116 aa21.65■■□□□ 1.06
H3F3B-207ENST00000589417 NEUROD6Q96NK8 337 aa21.65■■□□□ 1.06
H3F3B-207ENST00000589417 MKRN1Q9UHC7 482 aaKnown RBP21.65■■□□□ 1.06
H3F3B-207ENST00000589417 ABT1Q9ULW3 272 aaKnown RBP21.65■■□□□ 1.06
H3F3B-207ENST00000589417 ARID4AP29374 1257 aaPredicted RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms