RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 HTTP42858 3142 aa12.02□□□□□ -0.49
APOC1-204ENST00000589078 MKI67P46013 3256 aaKnown RBP12.01□□□□□ -0.49
APOC1-204ENST00000589078 COL4A1P02462 1669 aa12.01□□□□□ -0.49
APOC1-204ENST00000589078 ZBTB7BO15156 539 aaPredicted RBP12.01□□□□□ -0.49
APOC1-204ENST00000589078 TAF5LO75529 589 aa12.01□□□□□ -0.49
APOC1-204ENST00000589078 CIAO1O76071 339 aa12.01□□□□□ -0.49
APOC1-204ENST00000589078 EGFRP00533 1210 aa12.01□□□□□ -0.49
APOC1-204ENST00000589078 UBE4AQ14139 1066 aa12.01□□□□□ -0.49
APOC1-204ENST00000589078 MVPQ14764 893 aaKnown RBP12.01□□□□□ -0.49
APOC1-204ENST00000589078 TBC1D10BQ4KMP7 808 aaPredicted RBP12.01□□□□□ -0.49
APOC1-204ENST00000589078 ZNF804AQ7Z570 1209 aa12.01□□□□□ -0.49
APOC1-204ENST00000589078 PSMD14O00487 310 aa12□□□□□ -0.49
APOC1-204ENST00000589078 SLC10A3P09131 477 aa12□□□□□ -0.49
APOC1-204ENST00000589078 RPS12P25398 132 aaKnown RBP12□□□□□ -0.49
APOC1-204ENST00000589078 IL15P40933 162 aaPredicted RBP12□□□□□ -0.49
APOC1-204ENST00000589078 RFX5P48382 616 aaPredicted RBP12□□□□□ -0.49
APOC1-204ENST00000589078 PTPN12Q05209 780 aaKnown RBP12□□□□□ -0.49
APOC1-204ENST00000589078 PUM3Q15397 648 aaKnown RBP12□□□□□ -0.49
APOC1-204ENST00000589078 LRRC24Q50LG9 513 aa12□□□□□ -0.49
APOC1-204ENST00000589078 C15orf52Q6ZUT6 534 aaKnown RBP12□□□□□ -0.49
APOC1-204ENST00000589078 VPS37DQ86XT2 251 aa12□□□□□ -0.49
APOC1-204ENST00000589078 KLHDC4Q8TBB5 520 aa12□□□□□ -0.49
APOC1-204ENST00000589078 PUS3Q9BZE2 481 aaKnown RBP12□□□□□ -0.49
APOC1-204ENST00000589078 SIL1Q9H173 461 aa12□□□□□ -0.49
APOC1-204ENST00000589078 COPRSQ9NQ92 184 aa12□□□□□ -0.49
APOC1-204ENST00000589078 CEP126Q9P2H0 1117 aa12□□□□□ -0.49
APOC1-204ENST00000589078 HPS5Q9UPZ3 1129 aa12□□□□□ -0.49
APOC1-204ENST00000589078 USP17L3A6NCW0 530 aa11.99□□□□□ -0.49
APOC1-204ENST00000589078 USP17L4A6NCW7 530 aa11.99□□□□□ -0.49
APOC1-204ENST00000589078 PDE8BO95263 885 aa11.99□□□□□ -0.49
APOC1-204ENST00000589078 CAVIN4Q5BKX8 364 aa11.99□□□□□ -0.49
APOC1-204ENST00000589078 USP17L1Q7RTZ2 530 aa11.99□□□□□ -0.49
APOC1-204ENST00000589078 DPF2Q92785 391 aa11.99□□□□□ -0.49
APOC1-204ENST00000589078 COG6Q9Y2V7 657 aa11.99□□□□□ -0.49
APOC1-204ENST00000589078 CENPFP49454 3210 aa11.99□□□□□ -0.49
APOC1-204ENST00000589078 IFIT1P09914 478 aaKnown RBP11.98□□□□□ -0.49
APOC1-204ENST00000589078 SLC5A1P13866 664 aa11.98□□□□□ -0.49
APOC1-204ENST00000589078 G3BP1Q13283 466 aaKnown RBP eCLIP11.98□□□□□ -0.49
APOC1-204ENST00000589078 RBM26Q5T8P6 1007 aaKnown RBP11.98□□□□□ -0.49
APOC1-204ENST00000589078 FBXW7Q969H0 707 aa11.98□□□□□ -0.49
APOC1-204ENST00000589078 DCPSQ96C86 337 aaKnown RBP11.98□□□□□ -0.49
APOC1-204ENST00000589078 CSRNP1Q96S65 589 aa11.98□□□□□ -0.49
APOC1-204ENST00000589078 SCN9AQ15858 1988 aa11.98□□□□□ -0.49
APOC1-204ENST00000589078 PAPPA2Q9BXP8 1791 aa11.97□□□□□ -0.49
APOC1-204ENST00000589078 MYO3BQ8WXR4 1341 aa11.97□□□□□ -0.49
APOC1-204ENST00000589078 WTIPA6NIX2 430 aaPredicted RBP11.97□□□□□ -0.49
APOC1-204ENST00000589078 VIL1P09327 827 aaKnown RBP11.97□□□□□ -0.49
APOC1-204ENST00000589078 KLRK1P26718 216 aa11.97□□□□□ -0.49
APOC1-204ENST00000589078 HIBADHP31937 336 aaKnown RBP11.97□□□□□ -0.49
APOC1-204ENST00000589078 RRP1P56182 461 aaKnown RBP11.97□□□□□ -0.49
APOC1-204ENST00000589078 ATP8B2P98198 1209 aa11.97□□□□□ -0.49
APOC1-204ENST00000589078 OS9Q13438 667 aaPredicted RBP11.97□□□□□ -0.49
APOC1-204ENST00000589078 STRIP1Q5VSL9 837 aa11.97□□□□□ -0.49
APOC1-204ENST00000589078 RSBN1LQ6PCB5 846 aaPredicted RBP11.97□□□□□ -0.49
APOC1-204ENST00000589078 RASAL3Q86YV0 1011 aa11.97□□□□□ -0.49
APOC1-204ENST00000589078 VGLL2Q8N8G2 317 aa11.97□□□□□ -0.49
APOC1-204ENST00000589078 LPIN2Q92539 896 aa11.97□□□□□ -0.49
APOC1-204ENST00000589078 C1orf115Q9H7X2 142 aa11.97□□□□□ -0.49
APOC1-204ENST00000589078 CD209Q9NNX6 404 aa11.97□□□□□ -0.49
APOC1-204ENST00000589078 GGA3Q9NZ52 723 aa11.97□□□□□ -0.49
APOC1-204ENST00000589078 PA2G4Q9UQ80 394 aaKnown RBP11.97□□□□□ -0.49
APOC1-204ENST00000589078 ASTN2O75129 1339 aaPredicted RBP11.96□□□□□ -0.49
APOC1-204ENST00000589078 SNAP23O00161 211 aa11.96□□□□□ -0.49
APOC1-204ENST00000589078 HMMRO75330 724 aa11.96□□□□□ -0.49
APOC1-204ENST00000589078 FRAT2O75474 233 aaPredicted RBP11.96□□□□□ -0.49
APOC1-204ENST00000589078 MMP14P50281 582 aa11.96□□□□□ -0.49
APOC1-204ENST00000589078 ATP2B3Q16720 1220 aa11.96□□□□□ -0.49
APOC1-204ENST00000589078 KIF4BQ2VIQ3 1234 aa11.96□□□□□ -0.49
APOC1-204ENST00000589078 TTLL5Q6EMB2 1281 aa11.96□□□□□ -0.49
APOC1-204ENST00000589078 ATG9AQ7Z3C6 839 aa11.96□□□□□ -0.49
APOC1-204ENST00000589078 TXNRD3Q86VQ6 643 aa11.96□□□□□ -0.49
APOC1-204ENST00000589078 SULF1Q8IWU6 871 aa11.96□□□□□ -0.49
APOC1-204ENST00000589078 AGBL3Q8NEM8 1001 aa11.96□□□□□ -0.49
APOC1-204ENST00000589078 CDCA5Q96FF9 252 aa11.96□□□□□ -0.49
APOC1-204ENST00000589078 AKAP2Q9Y2D5 859 aa11.96□□□□□ -0.49
APOC1-204ENST00000589078 PSME4Q14997 1843 aa11.95□□□□□ -0.5
APOC1-204ENST00000589078 PNMA6EA0A0J9YXQ4 647 aa11.95□□□□□ -0.5
APOC1-204ENST00000589078 IL1R1P14778 569 aa11.95□□□□□ -0.5
APOC1-204ENST00000589078 POLA2Q14181 598 aa11.95□□□□□ -0.5
APOC1-204ENST00000589078 CEP85Q6P2H3 762 aa11.95□□□□□ -0.5
APOC1-204ENST00000589078 RPAP2Q8IXW5 612 aaPredicted RBP11.95□□□□□ -0.5
APOC1-204ENST00000589078 OGFOD1Q8N543 542 aa11.95□□□□□ -0.5
APOC1-204ENST00000589078 SSH3Q8TE77 659 aa11.95□□□□□ -0.5
APOC1-204ENST00000589078 KCNQ5Q9NR82 932 aa11.95□□□□□ -0.5
APOC1-204ENST00000589078 ZBTB40Q9NUA8 1239 aa11.95□□□□□ -0.5
APOC1-204ENST00000589078 GNL3LQ9NVN8 582 aaKnown RBP11.95□□□□□ -0.5
APOC1-204ENST00000589078 BRCA2P51587 3418 aa11.95□□□□□ -0.5
APOC1-204ENST00000589078 IRS2Q9Y4H2 1338 aa11.94□□□□□ -0.5
APOC1-204ENST00000589078 SURF6O75683 361 aaKnown RBP11.94□□□□□ -0.5
APOC1-204ENST00000589078 USP17L8P0C7I0 530 aa11.94□□□□□ -0.5
APOC1-204ENST00000589078 GYG1P46976 350 aa11.94□□□□□ -0.5
APOC1-204ENST00000589078 GTF2IP78347 998 aa11.94□□□□□ -0.5
APOC1-204ENST00000589078 PKN2Q16513 984 aaKnown RBP11.94□□□□□ -0.5
APOC1-204ENST00000589078 HSP90AB4PQ58FF6 505 aa11.94□□□□□ -0.5
APOC1-204ENST00000589078 DACT2Q5SW24 774 aa11.94□□□□□ -0.5
APOC1-204ENST00000589078 C20orf194Q5TEA3 1177 aa11.94□□□□□ -0.5
APOC1-204ENST00000589078 REM2Q8IYK8 340 aaPredicted RBP11.94□□□□□ -0.5
APOC1-204ENST00000589078 ZNF296Q8WUU4 475 aaPredicted RBP11.94□□□□□ -0.5
APOC1-204ENST00000589078 FAM84BQ96KN1 310 aaPredicted RBP11.94□□□□□ -0.5
APOC1-204ENST00000589078 HDAC9Q9UKV0 1011 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms