RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 GMPSP49915 693 aaPredicted RBP17.87■□□□□ 0.45
CNN1-208ENST00000588935 SCARF1Q14162 830 aa17.87■□□□□ 0.45
CNN1-208ENST00000588935 TSHZ3Q63HK5 1081 aa17.87■□□□□ 0.45
CNN1-208ENST00000588935 PI16Q6UXB8 463 aa17.87■□□□□ 0.45
CNN1-208ENST00000588935 PPP4R2Q9NY27 417 aa17.87■□□□□ 0.45
CNN1-208ENST00000588935 VIL1P09327 827 aaKnown RBP17.86■□□□□ 0.45
CNN1-208ENST00000588935 UQCRFS1P1P0C7P4 283 aa17.86■□□□□ 0.45
CNN1-208ENST00000588935 NUCB1Q02818 461 aa17.86■□□□□ 0.45
CNN1-208ENST00000588935 RASGRF1Q13972 1273 aa17.86■□□□□ 0.45
CNN1-208ENST00000588935 DACT2Q5SW24 774 aa17.86■□□□□ 0.45
CNN1-208ENST00000588935 STRIP1Q5VSL9 837 aa17.86■□□□□ 0.45
CNN1-208ENST00000588935 RSBN1LQ6PCB5 846 aaPredicted RBP17.86■□□□□ 0.45
CNN1-208ENST00000588935 CHD1LQ86WJ1 897 aa17.86■□□□□ 0.45
CNN1-208ENST00000588935 GPC2Q8N158 579 aa17.86■□□□□ 0.45
CNN1-208ENST00000588935 RRAGCQ9HB90 399 aa17.86■□□□□ 0.45
CNN1-208ENST00000588935 HMG20BQ9P0W2 317 aa17.86■□□□□ 0.45
CNN1-208ENST00000588935 DENND2AQ9ULE3 1009 aa17.86■□□□□ 0.45
CNN1-208ENST00000588935 NDUFB9Q9Y6M9 179 aa17.86■□□□□ 0.45
CNN1-208ENST00000588935 ZC3H4Q9UPT8 1303 aaKnown RBP17.86■□□□□ 0.45
CNN1-208ENST00000588935 SHTN1A0MZ66 631 aa17.85■□□□□ 0.45
CNN1-208ENST00000588935 MCAMP43121 646 aa17.85■□□□□ 0.45
CNN1-208ENST00000588935 MFSD14BQ5SR56 506 aa17.85■□□□□ 0.45
CNN1-208ENST00000588935 CERS5Q8N5B7 392 aa17.85■□□□□ 0.45
CNN1-208ENST00000588935 BOLA2Q9H3K6 86 aa17.85■□□□□ 0.45
CNN1-208ENST00000588935 FAM205AQ6ZU69 1335 aa17.84■□□□□ 0.45
CNN1-208ENST00000588935 KDM2BQ8NHM5 1336 aa17.84■□□□□ 0.45
CNN1-208ENST00000588935 ARID4AP29374 1257 aaPredicted RBP17.84■□□□□ 0.45
CNN1-208ENST00000588935 GRIK5Q16478 980 aa17.84■□□□□ 0.45
CNN1-208ENST00000588935 RBM26Q5T8P6 1007 aaKnown RBP17.84■□□□□ 0.45
CNN1-208ENST00000588935 ERICH6BQ5W0A0 696 aa17.84■□□□□ 0.45
CNN1-208ENST00000588935 TBC1D9Q6ZT07 1266 aa17.84■□□□□ 0.45
CNN1-208ENST00000588935 KIAA0825Q8IV33 1275 aa17.84■□□□□ 0.45
CNN1-208ENST00000588935 SPATA5Q8NB90 893 aa17.84■□□□□ 0.45
CNN1-208ENST00000588935 NMRK2Q9NPI5 230 aa17.84■□□□□ 0.45
CNN1-208ENST00000588935 ABCF2Q9UG63 623 aa17.84■□□□□ 0.45
CNN1-208ENST00000588935 CNOT7Q9UIV1 285 aaKnown RBP17.84■□□□□ 0.45
CNN1-208ENST00000588935 LMOD1P29536 600 aaPredicted RBP17.83■□□□□ 0.44
CNN1-208ENST00000588935 EPS15P42566 896 aa17.83■□□□□ 0.44
CNN1-208ENST00000588935 ZAP70P43403 619 aa17.83■□□□□ 0.44
CNN1-208ENST00000588935 DNAJC2Q99543 621 aaKnown RBP17.83■□□□□ 0.44
CNN1-208ENST00000588935 ECHDC1Q9NTX5 307 aa17.83■□□□□ 0.44
CNN1-208ENST00000588935 PSME4Q14997 1843 aa17.83■□□□□ 0.44
CNN1-208ENST00000588935 COL1A1P02452 1464 aaPredicted RBP17.82■□□□□ 0.44
CNN1-208ENST00000588935 SEMA3EO15041 775 aa17.82■□□□□ 0.44
CNN1-208ENST00000588935 SCNN1DP51172 638 aa17.82■□□□□ 0.44
CNN1-208ENST00000588935 CENPQQ7L2Z9 268 aaPredicted RBP17.82■□□□□ 0.44
CNN1-208ENST00000588935 MICALL2Q8IY33 904 aa17.82■□□□□ 0.44
CNN1-208ENST00000588935 WDR66Q8TBY9 1149 aa17.82■□□□□ 0.44
CNN1-208ENST00000588935 GPATCH3Q96I76 525 aa17.82■□□□□ 0.44
CNN1-208ENST00000588935 AKAP11Q9UKA4 1901 aa17.81■□□□□ 0.44
CNN1-208ENST00000588935 MAP4K4O95819 1239 aaPredicted RBP17.81■□□□□ 0.44
CNN1-208ENST00000588935 MX1P20591 662 aa17.81■□□□□ 0.44
CNN1-208ENST00000588935 SKAP1Q86WV1 359 aa17.81■□□□□ 0.44
CNN1-208ENST00000588935 AGBL3Q8NEM8 1001 aa17.81■□□□□ 0.44
CNN1-208ENST00000588935 GPBP1L1Q9HC44 474 aaPredicted RBP17.81■□□□□ 0.44
CNN1-208ENST00000588935 POTECB2RU33 542 aa17.8■□□□□ 0.44
CNN1-208ENST00000588935 H7C1D1 291 aa17.8■□□□□ 0.44
CNN1-208ENST00000588935 USP17L8P0C7I0 530 aa17.8■□□□□ 0.44
CNN1-208ENST00000588935 ATP5JP18859 108 aa17.8■□□□□ 0.44
CNN1-208ENST00000588935 SAMD7Q7Z3H4 446 aa17.8■□□□□ 0.44
CNN1-208ENST00000588935 TBC1D22AQ8WUA7 517 aa17.8■□□□□ 0.44
CNN1-208ENST00000588935 EDC3Q96F86 508 aaKnown RBP17.8■□□□□ 0.44
CNN1-208ENST00000588935 ZNF512BQ96KM6 892 aaPredicted RBP17.8■□□□□ 0.44
CNN1-208ENST00000588935 GMLQ99445 158 aa17.8■□□□□ 0.44
CNN1-208ENST00000588935 ANTXR1Q9H6X2 564 aa17.8■□□□□ 0.44
CNN1-208ENST00000588935 GPRC5DQ9NZD1 345 aa17.8■□□□□ 0.44
CNN1-208ENST00000588935 HACL1Q9UJ83 578 aa17.8■□□□□ 0.44
CNN1-208ENST00000588935 TTF2Q9UNY4 1162 aaKnown RBP17.8■□□□□ 0.44
CNN1-208ENST00000588935 CYP2E1P05181 493 aaPredicted RBP17.79■□□□□ 0.44
CNN1-208ENST00000588935 RPS12P25398 132 aaKnown RBP17.79■□□□□ 0.44
CNN1-208ENST00000588935 PDE4AP27815 886 aa17.79■□□□□ 0.44
CNN1-208ENST00000588935 RBM5P52756 815 aaKnown RBP eCLIP17.79■□□□□ 0.44
CNN1-208ENST00000588935 TBC1D10BQ4KMP7 808 aaPredicted RBP17.79■□□□□ 0.44
CNN1-208ENST00000588935 EAPPQ56P03 285 aaPredicted RBP17.79■□□□□ 0.44
CNN1-208ENST00000588935 DPF2Q92785 391 aa17.79■□□□□ 0.44
CNN1-208ENST00000588935 RAI14Q9P0K7 980 aa17.79■□□□□ 0.44
CNN1-208ENST00000588935 LRP2BPQ9P2M1 347 aa17.79■□□□□ 0.44
CNN1-208ENST00000588935 MYO5AQ9Y4I1 1855 aaKnown RBP17.79■□□□□ 0.44
CNN1-208ENST00000588935 ZNF646O15015 1829 aaPredicted RBP17.79■□□□□ 0.44
CNN1-208ENST00000588935 MYO3BQ8WXR4 1341 aa17.78■□□□□ 0.44
CNN1-208ENST00000588935 GOLIM4O00461 696 aa17.78■□□□□ 0.44
CNN1-208ENST00000588935 LDHBP07195 334 aaKnown RBP17.78■□□□□ 0.44
CNN1-208ENST00000588935 VEGFAP15692 232 aaPredicted RBP17.78■□□□□ 0.44
CNN1-208ENST00000588935 PRDX5P30044 214 aa17.78■□□□□ 0.44
CNN1-208ENST00000588935 EPHX2P34913 555 aa17.78■□□□□ 0.44
CNN1-208ENST00000588935 PDE1AP54750 535 aa17.78■□□□□ 0.44
CNN1-208ENST00000588935 FKBP1AP62942 108 aaKnown RBP17.78■□□□□ 0.44
CNN1-208ENST00000588935 ERICH6Q7L0X2 663 aa17.78■□□□□ 0.44
CNN1-208ENST00000588935 PLEKHM2Q8IWE5 1019 aa17.78■□□□□ 0.44
CNN1-208ENST00000588935 OGFOD1Q8N543 542 aa17.78■□□□□ 0.44
CNN1-208ENST00000588935 ZNF784Q8NCA9 323 aaPredicted RBP17.78■□□□□ 0.44
CNN1-208ENST00000588935 L3MBTL3Q96JM7 780 aaPredicted RBP17.78■□□□□ 0.44
CNN1-208ENST00000588935 PIH1D3Q9NQM4 214 aaKnown RBP17.78■□□□□ 0.44
CNN1-208ENST00000588935 HDAC9Q9UKV0 1011 aa17.78■□□□□ 0.44
CNN1-208ENST00000588935 UTRNP46939 3433 aa17.78■□□□□ 0.44
CNN1-208ENST00000588935 PCDHAC2Q9Y5I4 1007 aa17.77■□□□□ 0.44
CNN1-208ENST00000588935 TTC41PQ6P2S7 1318 aa17.76■□□□□ 0.43
CNN1-208ENST00000588935 IQCA1LA6NCM1 817 aa17.76■□□□□ 0.43
CNN1-208ENST00000588935 ERC2O15083 957 aa17.76■□□□□ 0.43
CNN1-208ENST00000588935 IDH1O75874 414 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms